RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 CCDC144AA2RUR9 1427 aa22.29■■□□□ 1.16
USP8-208ENST00000559329 SPAG9O60271 1321 aaKnown RBP22.28■■□□□ 1.16
USP8-208ENST00000559329 USP47Q96K76 1375 aa22.28■■□□□ 1.16
USP8-208ENST00000559329 DEPDC5O75140 1603 aa22.27■■□□□ 1.16
USP8-208ENST00000559329 KIF7Q2M1P5 1343 aa22.26■■□□□ 1.15
USP8-208ENST00000559329 ATP7AQ04656 1500 aa22.26■■□□□ 1.15
USP8-208ENST00000559329 BCORL1Q5H9F3 1711 aa22.26■■□□□ 1.15
USP8-208ENST00000559329 AFAP1Q8N556 730 aa22.25■■□□□ 1.15
USP8-208ENST00000559329 ADGRL1O94910 1474 aa22.24■■□□□ 1.15
USP8-208ENST00000559329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.24■■□□□ 1.151e-6■■□□□ 12.2
USP8-208ENST00000559329 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
USP8-208ENST00000559329 TRPM1Q7Z4N2 1603 aa22.2■■□□□ 1.14
USP8-208ENST00000559329 PRAG1Q86YV5 1406 aa22.2■■□□□ 1.14
USP8-208ENST00000559329 SCAPERQ9BY12 1400 aa22.2■■□□□ 1.14
USP8-208ENST00000559329 A2MP01023 1474 aa22.2■■□□□ 1.14
USP8-208ENST00000559329 VWDEQ8N2E2 1590 aa22.19■■□□□ 1.14
USP8-208ENST00000559329 E9PCH4 1651 aa22.19■■□□□ 1.14
USP8-208ENST00000559329 DCAF11Q8TEB1 546 aa22.19■■□□□ 1.14
USP8-208ENST00000559329 EIF2AK4Q9P2K8 1649 aaKnown RBP22.19■■□□□ 1.14
USP8-208ENST00000559329 ARID4BQ4LE39 1312 aaPredicted RBP22.17■■□□□ 1.14
USP8-208ENST00000559329 TET3O43151 1660 aa22.15■■□□□ 1.14
USP8-208ENST00000559329 CFAP74Q9C0B2 1584 aa22.14■■□□□ 1.14
USP8-208ENST00000559329 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.14
USP8-208ENST00000559329 CARD11Q9BXL7 1154 aa22.14■■□□□ 1.14
USP8-208ENST00000559329 KDM2AQ9Y2K7 1162 aa22.14■■□□□ 1.14
USP8-208ENST00000559329 TRPM2O94759 1503 aa22.14■■□□□ 1.13
USP8-208ENST00000559329 LAMC1P11047 1609 aa22.14■■□□□ 1.13
USP8-208ENST00000559329 PRDM15P57071 1507 aaPredicted RBP22.13■■□□□ 1.13
USP8-208ENST00000559329 MROH1Q8NDA8 1641 aa22.13■■□□□ 1.13
USP8-208ENST00000559329 KIDINS220Q9ULH0 1771 aa22.13■■□□□ 1.13
USP8-208ENST00000559329 PTPRTO14522 1441 aa22.12■■□□□ 1.13
USP8-208ENST00000559329 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
USP8-208ENST00000559329 DHX29Q7Z478 1369 aaKnown RBP22.12■■□□□ 1.13
USP8-208ENST00000559329 ZNF518AQ6AHZ1 1483 aa22.11■■□□□ 1.13
USP8-208ENST00000559329 PRKRIP1Q9H875 184 aaPredicted RBP22.11■■□□□ 1.13
USP8-208ENST00000559329 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
USP8-208ENST00000559329 ROCK2O75116 1388 aaKnown RBP22.1■■□□□ 1.13
USP8-208ENST00000559329 CD109Q6YHK3 1445 aa22.09■■□□□ 1.13
USP8-208ENST00000559329 CEP152O94986 1710 aa22.07■■□□□ 1.12
USP8-208ENST00000559329 POGZQ7Z3K3 1410 aa22.06■■□□□ 1.12
USP8-208ENST00000559329 RGL3Q3MIN7 710 aa22.06■■□□□ 1.12
USP8-208ENST00000559329 CLTCL1P53675 1640 aa22.05■■□□□ 1.12
USP8-208ENST00000559329 RNF17Q9BXT8 1623 aaKnown RBP22.05■■□□□ 1.12
USP8-208ENST00000559329 ST20-MTHFSA0A0A6YYL1 179 aa22.04■■□□□ 1.12
USP8-208ENST00000559329 KANK1Q14678 1352 aa22.04■■□□□ 1.12
USP8-208ENST00000559329 MLH3Q9UHC1 1453 aa22.03■■□□□ 1.12
USP8-208ENST00000559329 NEURL4Q96JN8 1562 aa22.03■■□□□ 1.12
USP8-208ENST00000559329 MADDQ8WXG6 1647 aa22.01■■□□□ 1.11
USP8-208ENST00000559329 LMTK2Q8IWU2 1503 aa22.01■■□□□ 1.11
USP8-208ENST00000559329 KIF3BO15066 747 aa22.01■■□□□ 1.11
USP8-208ENST00000559329 EFCAB6Q5THR3 1501 aa22.01■■□□□ 1.11
USP8-208ENST00000559329 CCDC184Q52MB2 194 aa22■■□□□ 1.11
USP8-208ENST00000559329 FRMPD1Q5SYB0 1578 aa22■■□□□ 1.11
USP8-208ENST00000559329 HECW2Q9P2P5 1572 aa22■■□□□ 1.11
USP8-208ENST00000559329 NEO1Q92859 1461 aa22■■□□□ 1.11
USP8-208ENST00000559329 NBPF1Q3BBV0 1214 aa22■■□□□ 1.11
USP8-208ENST00000559329 SUPT16HQ9Y5B9 1047 aaKnown RBP21.98■■□□□ 1.11
USP8-208ENST00000559329 PPRC1Q5VV67 1664 aaKnown RBP21.96■■□□□ 1.11
USP8-208ENST00000559329 MYT1LQ9UL68 1186 aa21.96■■□□□ 1.11
USP8-208ENST00000559329 ABCA6Q8N139 1617 aa21.94■■□□□ 1.1
USP8-208ENST00000559329 COL17A1Q9UMD9 1497 aaPredicted RBP21.94■■□□□ 1.1
USP8-208ENST00000559329 STAC3Q96MF2 364 aa21.94■■□□□ 1.1
USP8-208ENST00000559329 MAP3K4Q9Y6R4 1608 aa21.94■■□□□ 1.1
USP8-208ENST00000559329 POLR3GLQ9BT43 218 aa21.92■■□□□ 1.1
USP8-208ENST00000559329 IQGAP1P46940 1657 aa21.91■■□□□ 1.1
USP8-208ENST00000559329 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
USP8-208ENST00000559329 HNRNPUQ00839 825 aaKnown RBP eCLIP21.9■■□□□ 1.1
USP8-208ENST00000559329 TESK2Q96S53 571 aa21.9■■□□□ 1.1
USP8-208ENST00000559329 GLI2P10070 1586 aa21.9■■□□□ 1.1
USP8-208ENST00000559329 UGGT1Q9NYU2 1555 aa21.88■■□□□ 1.09
USP8-208ENST00000559329 KIAA1210Q9ULL0 1709 aa21.88■■□□□ 1.09
USP8-208ENST00000559329 RICTORQ6R327 1708 aa21.87■■□□□ 1.09
USP8-208ENST00000559329 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
USP8-208ENST00000559329 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
USP8-208ENST00000559329 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
USP8-208ENST00000559329 MYOM2P54296 1465 aa21.86■■□□□ 1.09
USP8-208ENST00000559329 IFT172Q9UG01 1749 aa21.86■■□□□ 1.09
USP8-208ENST00000559329 KIF1BO60333 1816 aa21.85■■□□□ 1.09
USP8-208ENST00000559329 DIP2CQ9Y2E4 1556 aa21.85■■□□□ 1.09
USP8-208ENST00000559329 KTN1Q86UP2 1357 aaKnown RBP21.85■■□□□ 1.09
USP8-208ENST00000559329 DISP3Q9P2K9 1392 aa21.85■■□□□ 1.09
USP8-208ENST00000559329 MROH2AA6NES4 1674 aa21.83■■□□□ 1.09
USP8-208ENST00000559329 ABCC3O15438 1527 aa21.83■■□□□ 1.09
USP8-208ENST00000559329 NPATQ14207 1427 aa21.82■■□□□ 1.08
USP8-208ENST00000559329 ADGRB3O60242 1522 aa21.82■■□□□ 1.08
USP8-208ENST00000559329 SCAF11Q99590 1463 aaKnown RBP21.81■■□□□ 1.08
USP8-208ENST00000559329 FAM9BQ8IZU0 186 aa21.8■■□□□ 1.08
USP8-208ENST00000559329 DNAJC5Q9H3Z4 198 aa21.8■■□□□ 1.08
USP8-208ENST00000559329 RAPGEF3O95398 923 aa21.8■■□□□ 1.08
USP8-208ENST00000559329 NRXN1Q9ULB1 1477 aa21.8■■□□□ 1.08
USP8-208ENST00000559329 CYB5RLQ6IPT4 315 aa21.78■■□□□ 1.08
USP8-208ENST00000559329 ZBED9Q6R2W3 1325 aa21.78■■□□□ 1.08
USP8-208ENST00000559329 CAMSAP1Q5T5Y3 1602 aa21.77■■□□□ 1.08
USP8-208ENST00000559329 PER1O15534 1290 aaPredicted RBP21.76■■□□□ 1.07
USP8-208ENST00000559329 TMF1P82094 1093 aa21.76■■□□□ 1.07
USP8-208ENST00000559329 RALBP1Q15311 655 aa21.76■■□□□ 1.07
USP8-208ENST00000559329 DIP2BQ9P265 1576 aa21.76■■□□□ 1.07
USP8-208ENST00000559329 PARD3Q8TEW0 1356 aa21.75■■□□□ 1.07
USP8-208ENST00000559329 MYBBP1AQ9BQG0 1328 aaKnown RBP21.74■■□□□ 1.07
USP8-208ENST00000559329 BRD4O60885 1362 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms