RNA–Protein interactions for RNA: ENST00000559207.1

CPNE6-212, Transcript of copine 6, humanhuman

TSL 3

Gene CPNE6, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-212ENST00000559207 LTBP4Q8N2S1 1624 aa18.34■□□□□ 0.53
CPNE6-212ENST00000559207 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
CPNE6-212ENST00000559207 ZNF142P52746 1687 aaPredicted RBP18.34■□□□□ 0.53
CPNE6-212ENST00000559207 CEP170BQ9Y4F5 1589 aaPredicted RBP18.34■□□□□ 0.53
CPNE6-212ENST00000559207 WASHC2CQ9Y4E1 1318 aa18.32■□□□□ 0.52
CPNE6-212ENST00000559207 PKD2Q13563 968 aa18.32■□□□□ 0.52
CPNE6-212ENST00000559207 PLA2R1Q13018 1463 aa18.32■□□□□ 0.52
CPNE6-212ENST00000559207 SPATA31D1Q6ZQQ2 1576 aa18.3■□□□□ 0.52
CPNE6-212ENST00000559207 KDM5DQ9BY66 1539 aa18.3■□□□□ 0.52
CPNE6-212ENST00000559207 A2ML1A8K2U0 1454 aa18.3■□□□□ 0.52
CPNE6-212ENST00000559207 TCOF1Q13428 1488 aaKnown RBP18.3■□□□□ 0.52
CPNE6-212ENST00000559207 MYOM3Q5VTT5 1437 aa18.3■□□□□ 0.52
CPNE6-212ENST00000559207 MIA2Q96PC5 1412 aa18.3■□□□□ 0.52
CPNE6-212ENST00000559207 TNRQ92752 1358 aa18.29■□□□□ 0.52
CPNE6-212ENST00000559207 ZNF335Q9H4Z2 1342 aaPredicted RBP18.28■□□□□ 0.52
CPNE6-212ENST00000559207 PZPP20742 1482 aa18.28■□□□□ 0.52
CPNE6-212ENST00000559207 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
CPNE6-212ENST00000559207 DNMT1P26358 1616 aaKnown RBP18.27■□□□□ 0.52
CPNE6-212ENST00000559207 MAST1Q9Y2H9 1570 aa18.27■□□□□ 0.52
CPNE6-212ENST00000559207 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
CPNE6-212ENST00000559207 APLP2Q06481 763 aa18.22■□□□□ 0.51
CPNE6-212ENST00000559207 RNF17Q9BXT8 1623 aaKnown RBP18.21■□□□□ 0.51
CPNE6-212ENST00000559207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.5
CPNE6-212ENST00000559207 ABCC3O15438 1527 aa18.19■□□□□ 0.5
CPNE6-212ENST00000559207 ABCC5O15440 1437 aa18.19■□□□□ 0.5
CPNE6-212ENST00000559207 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
CPNE6-212ENST00000559207 NLRP1Q9C000 1473 aa18.19■□□□□ 0.5
CPNE6-212ENST00000559207 ANKLE2Q86XL3 938 aa18.18■□□□□ 0.5
CPNE6-212ENST00000559207 EIF2AK4Q9P2K8 1649 aaKnown RBP18.18■□□□□ 0.5
CPNE6-212ENST00000559207 MROH1Q8NDA8 1641 aa18.17■□□□□ 0.5
CPNE6-212ENST00000559207 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
CPNE6-212ENST00000559207 DUOX2Q9NRD8 1548 aa18.17■□□□□ 0.5
CPNE6-212ENST00000559207 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
CPNE6-212ENST00000559207 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
CPNE6-212ENST00000559207 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
CPNE6-212ENST00000559207 KIF15Q9NS87 1388 aa18.16■□□□□ 0.5
CPNE6-212ENST00000559207 UBAP1LF5GYI3 381 aa18.15■□□□□ 0.5
CPNE6-212ENST00000559207 ZC3H13Q5T200 1668 aaKnown RBP18.15■□□□□ 0.5
CPNE6-212ENST00000559207 POLR1AO95602 1720 aaPredicted RBP18.15■□□□□ 0.5
CPNE6-212ENST00000559207 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
CPNE6-212ENST00000559207 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.49
CPNE6-212ENST00000559207 DAPK1P53355 1430 aa18.13■□□□□ 0.49
CPNE6-212ENST00000559207 ERVK-7P63135 1459 aa18.13■□□□□ 0.49
CPNE6-212ENST00000559207 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
CPNE6-212ENST00000559207 CEP152O94986 1710 aa18.11■□□□□ 0.49
CPNE6-212ENST00000559207 MED14O60244 1454 aa18.1■□□□□ 0.49
CPNE6-212ENST00000559207 NPHP4O75161 1426 aaPredicted RBP18.1■□□□□ 0.49
CPNE6-212ENST00000559207 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
CPNE6-212ENST00000559207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
CPNE6-212ENST00000559207 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
CPNE6-212ENST00000559207 CFAP65Q6ZU64 1925 aaKnown RBP18.1■□□□□ 0.49
CPNE6-212ENST00000559207 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
CPNE6-212ENST00000559207 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.48
CPNE6-212ENST00000559207 ARHGAP31Q2M1Z3 1444 aa18.07■□□□□ 0.48
CPNE6-212ENST00000559207 VWDEQ8N2E2 1590 aa18.07■□□□□ 0.48
CPNE6-212ENST00000559207 CPS1P31327 1500 aa18.07■□□□□ 0.48
CPNE6-212ENST00000559207 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
CPNE6-212ENST00000559207 UBR1Q8IWV7 1749 aa18.03■□□□□ 0.48
CPNE6-212ENST00000559207 KANK1Q14678 1352 aa18.03■□□□□ 0.48
CPNE6-212ENST00000559207 IQGAP1P46940 1657 aa18.03■□□□□ 0.48
CPNE6-212ENST00000559207 LTKP29376 864 aa18.02■□□□□ 0.48
CPNE6-212ENST00000559207 TOM1O60784 492 aa18.01■□□□□ 0.47
CPNE6-212ENST00000559207 PIP4K2BP78356 416 aa18.01■□□□□ 0.47
CPNE6-212ENST00000559207 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
CPNE6-212ENST00000559207 TXNDC2Q86VQ3 553 aa18■□□□□ 0.47
CPNE6-212ENST00000559207 SCAF1Q9H7N4 1312 aaKnown RBP17.99■□□□□ 0.47
CPNE6-212ENST00000559207 SCAF11Q99590 1463 aaKnown RBP17.99■□□□□ 0.47
CPNE6-212ENST00000559207 ARHGAP23Q9P227 1491 aa17.99■□□□□ 0.47
CPNE6-212ENST00000559207 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
CPNE6-212ENST00000559207 ADGRL2O95490 1459 aa17.98■□□□□ 0.47
CPNE6-212ENST00000559207 SLIT1O75093 1534 aa17.98■□□□□ 0.47
CPNE6-212ENST00000559207 HSPA1LP34931 641 aa17.97■□□□□ 0.47
CPNE6-212ENST00000559207 IDI1Q13907 227 aa17.97■□□□□ 0.47
CPNE6-212ENST00000559207 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.47
CPNE6-212ENST00000559207 PIK3C2BO00750 1634 aa17.96■□□□□ 0.47
CPNE6-212ENST00000559207 LRRC7Q96NW7 1537 aa17.95■□□□□ 0.46
CPNE6-212ENST00000559207 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
CPNE6-212ENST00000559207 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
CPNE6-212ENST00000559207 TMEM2Q9UHN6 1383 aa17.94■□□□□ 0.46
CPNE6-212ENST00000559207 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
CPNE6-212ENST00000559207 ANKRD50Q9ULJ7 1429 aa17.93■□□□□ 0.46
CPNE6-212ENST00000559207 NOS1P29475 1434 aa17.92■□□□□ 0.46
CPNE6-212ENST00000559207 SYNMO15061 1565 aa17.91■□□□□ 0.46
CPNE6-212ENST00000559207 EFCAB6Q5THR3 1501 aa17.91■□□□□ 0.46
CPNE6-212ENST00000559207 KDM5AP29375 1690 aaKnown RBP17.88■□□□□ 0.45
CPNE6-212ENST00000559207 SLC52A1Q9NWF4 448 aa17.88■□□□□ 0.45
CPNE6-212ENST00000559207 RPRD2Q5VT52 1461 aaKnown RBP17.85■□□□□ 0.45
CPNE6-212ENST00000559207 SLC26A8Q96RN1 970 aa17.85■□□□□ 0.45
CPNE6-212ENST00000559207 TET3O43151 1660 aa17.84■□□□□ 0.45
CPNE6-212ENST00000559207 ADGRB3O60242 1522 aa17.84■□□□□ 0.45
CPNE6-212ENST00000559207 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
CPNE6-212ENST00000559207 ROCK1Q13464 1354 aa17.83■□□□□ 0.45
CPNE6-212ENST00000559207 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
CPNE6-212ENST00000559207 KCNA6P17658 529 aa17.82■□□□□ 0.44
CPNE6-212ENST00000559207 ITGAEP38570 1179 aa17.81■□□□□ 0.44
CPNE6-212ENST00000559207 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
CPNE6-212ENST00000559207 XIRP1Q702N8 1843 aaKnown RBP17.81■□□□□ 0.44
CPNE6-212ENST00000559207 UNC13BO14795 1591 aa17.8■□□□□ 0.44
CPNE6-212ENST00000559207 MED1Q15648 1581 aaPredicted RBP17.8■□□□□ 0.44
CPNE6-212ENST00000559207 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms