RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 FBXW7Q969H0 707 aa22.28■■□□□ 1.16
CASC4-208ENST00000559151 FOSBP53539 338 aa22.27■■□□□ 1.16
CASC4-208ENST00000559151 PLEKHG3A1L390 1219 aa22.26■■□□□ 1.15
CASC4-208ENST00000559151 KHSRPQ92945 711 aaKnown RBP eCLIP22.26■■□□□ 1.15
CASC4-208ENST00000559151 DDRGK1Q96HY6 314 aa22.25■■□□□ 1.15
CASC4-208ENST00000559151 POTEB2H3BUK9 544 aa22.24■■□□□ 1.15
CASC4-208ENST00000559151 NUDT7P0C024 238 aa22.23■■□□□ 1.15
CASC4-208ENST00000559151 HOXB3P14651 431 aaPredicted RBP22.23■■□□□ 1.15
CASC4-208ENST00000559151 DOK7Q18PE1 504 aa22.22■■□□□ 1.15
CASC4-208ENST00000559151 ARSIQ5FYB1 569 aa22.22■■□□□ 1.15
CASC4-208ENST00000559151 ZNF454Q8N9F8 522 aa22.21■■□□□ 1.15
CASC4-208ENST00000559151 GIGYF2Q6Y7W6 1299 aaKnown RBP22.19■■□□□ 1.14
CASC4-208ENST00000559151 REPIN1Q9BWE0 567 aaKnown RBP22.18■■□□□ 1.14
CASC4-208ENST00000559151 ZDHHC16Q969W1 377 aa22.17■■□□□ 1.14
CASC4-208ENST00000559151 C6orf132Q5T0Z8 1188 aa22.16■■□□□ 1.14
CASC4-208ENST00000559151 MS4A1P11836 297 aa22.14■■□□□ 1.13
CASC4-208ENST00000559151 PHOX2BQ99453 314 aa22.14■■□□□ 1.13
CASC4-208ENST00000559151 RIMBP2O15034 1052 aa22.12■■□□□ 1.13
CASC4-208ENST00000559151 FAM161AQ3B820 660 aa22.12■■□□□ 1.13
CASC4-208ENST00000559151 GPR153Q6NV75 609 aa22.11■■□□□ 1.13
CASC4-208ENST00000559151 PADI6Q6TGC4 694 aa22.11■■□□□ 1.13
CASC4-208ENST00000559151 ADAM33Q9BZ11 813 aa22.11■■□□□ 1.13
CASC4-208ENST00000559151 ZSWIM6Q9HCJ5 1215 aa22.1■■□□□ 1.13
CASC4-208ENST00000559151 MDM2Q00987 491 aaPredicted RBP22.09■■□□□ 1.13
CASC4-208ENST00000559151 CERKQ8TCT0 537 aa22.09■■□□□ 1.13
CASC4-208ENST00000559151 TMUB1Q9BVT8 246 aa22.09■■□□□ 1.13
CASC4-208ENST00000559151 SCUBE2Q9NQ36 999 aa22.08■■□□□ 1.13
CASC4-208ENST00000559151 CLCN1P35523 988 aa22.07■■□□□ 1.12
CASC4-208ENST00000559151 ZNF710Q8N1W2 664 aa22.05■■□□□ 1.12
CASC4-208ENST00000559151 GPCPD1Q9NPB8 672 aa22.05■■□□□ 1.12
CASC4-208ENST00000559151 METTL3Q86U44 580 aaKnown RBP22.02■■□□□ 1.12
CASC4-208ENST00000559151 LHX6Q9UPM6 363 aa22.01■■□□□ 1.11
CASC4-208ENST00000559151 ADGRG1Q9Y653 693 aa22.01■■□□□ 1.11
CASC4-208ENST00000559151 MAMSTRQ6ZN01 415 aa22■■□□□ 1.11
CASC4-208ENST00000559151 NLRP7Q8WX94 980 aa22■■□□□ 1.11
CASC4-208ENST00000559151 OATP04181 439 aa21.99■■□□□ 1.11
CASC4-208ENST00000559151 TTC13Q8NBP0 860 aa21.99■■□□□ 1.11
CASC4-208ENST00000559151 RBM27Q9P2N5 1060 aaKnown RBP21.98■■□□□ 1.11
CASC4-208ENST00000559151 PXYLP1Q8TE99 480 aa21.97■■□□□ 1.11
CASC4-208ENST00000559151 SSTR3P32745 418 aaPredicted RBP21.94■■□□□ 1.1
CASC4-208ENST00000559151 PRSS12P56730 875 aa21.94■■□□□ 1.1
CASC4-208ENST00000559151 GOPCQ9HD26 462 aa21.94■■□□□ 1.1
CASC4-208ENST00000559151 CDCA7LQ96GN5 454 aa21.93■■□□□ 1.1
CASC4-208ENST00000559151 PPP4R3BQ5MIZ7 849 aa21.92■■□□□ 1.1
CASC4-208ENST00000559151 COL9A1P20849 921 aa21.89■■□□□ 1.09
CASC4-208ENST00000559151 FAM217BQ9NTX9 383 aaPredicted RBP21.89■■□□□ 1.09
CASC4-208ENST00000559151 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
CASC4-208ENST00000559151 FAM198AQ9UFP1 575 aa21.86■■□□□ 1.09
CASC4-208ENST00000559151 PCMTD1Q96MG8 357 aaPredicted RBP21.85■■□□□ 1.09
CASC4-208ENST00000559151 BEGAINQ9BUH8 593 aa21.85■■□□□ 1.09
CASC4-208ENST00000559151 BCL2L12Q9HB09 334 aa21.85■■□□□ 1.09
CASC4-208ENST00000559151 PSDA5PKW4 1024 aaPredicted RBP21.84■■□□□ 1.09
CASC4-208ENST00000559151 SH3D19Q5HYK7 790 aa21.84■■□□□ 1.09
CASC4-208ENST00000559151 RBM46Q8TBY0 533 aaKnown RBP21.83■■□□□ 1.09
CASC4-208ENST00000559151 SNPHO15079 494 aa21.78■■□□□ 1.08
CASC4-208ENST00000559151 HOXB1P14653 301 aaPredicted RBP21.78■■□□□ 1.08
CASC4-208ENST00000559151 PTPREP23469 700 aa21.78■■□□□ 1.08
CASC4-208ENST00000559151 PPP1R3GB7ZBB8 358 aa21.77■■□□□ 1.08
CASC4-208ENST00000559151 ZMYND15Q9H091 742 aa21.77■■□□□ 1.08
CASC4-208ENST00000559151 TSKSQ9UJT2 592 aa21.77■■□□□ 1.08
CASC4-208ENST00000559151 RSPH6AQ9H0K4 717 aa21.74■■□□□ 1.07
CASC4-208ENST00000559151 SKIV2LQ15477 1246 aaKnown RBP21.72■■□□□ 1.07
CASC4-208ENST00000559151 EYA1Q99502 592 aa21.72■■□□□ 1.07
CASC4-208ENST00000559151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.71■■□□□ 1.07
CASC4-208ENST00000559151 RCCD1A6NED2 376 aa21.71■■□□□ 1.07
CASC4-208ENST00000559151 C3orf80F5H4A9 247 aa21.71■■□□□ 1.07
CASC4-208ENST00000559151 NUDT18Q6ZVK8 323 aa21.68■■□□□ 1.06
CASC4-208ENST00000559151 FLIIQ13045 1269 aa21.67■■□□□ 1.06
CASC4-208ENST00000559151 ONECUT3O60422 494 aaPredicted RBP21.66■■□□□ 1.06
CASC4-208ENST00000559151 POLR3EQ9NVU0 708 aa21.66■■□□□ 1.06
CASC4-208ENST00000559151 TRIM6-TRIM34B2RNG4 842 aa21.65■■□□□ 1.06
CASC4-208ENST00000559151 MYSM1Q5VVJ2 828 aa21.65■■□□□ 1.06
CASC4-208ENST00000559151 PROCA1Q8NCQ7 364 aaPredicted RBP21.65■■□□□ 1.06
CASC4-208ENST00000559151 PNMA3Q9UL41 463 aa21.64■■□□□ 1.05
CASC4-208ENST00000559151 NBPF26B4DH59 902 aa21.63■■□□□ 1.05
CASC4-208ENST00000559151 ARXQ96QS3 562 aa21.63■■□□□ 1.05
CASC4-208ENST00000559151 KCNK17Q96T54 332 aa21.62■■□□□ 1.05
CASC4-208ENST00000559151 ATP1B4Q9UN42 357 aaPredicted RBP21.62■■□□□ 1.05
CASC4-208ENST00000559151 PROX2Q3B8N5 592 aa21.61■■□□□ 1.05
CASC4-208ENST00000559151 TATDN2Q93075 761 aa21.61■■□□□ 1.05
CASC4-208ENST00000559151 TBC1D2Q9BYX2 928 aa21.61■■□□□ 1.05
CASC4-208ENST00000559151 OTUD5Q96G74 571 aa21.6■■□□□ 1.05
CASC4-208ENST00000559151 DNAJB2P25686 324 aa21.58■■□□□ 1.05
CASC4-208ENST00000559151 PACS2Q86VP3 889 aa21.58■■□□□ 1.05
CASC4-208ENST00000559151 SMAPO00193 183 aa21.55■■□□□ 1.04
CASC4-208ENST00000559151 CD46P15529 392 aa21.55■■□□□ 1.04
CASC4-208ENST00000559151 CLK2P49760 499 aaKnown RBP21.55■■□□□ 1.04
CASC4-208ENST00000559151 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.53■■□□□ 1.04
CASC4-208ENST00000559151 DDX11L8A8MPP1 907 aa21.52■■□□□ 1.04
CASC4-208ENST00000559151 TMEM134Q9H6X4 195 aa21.52■■□□□ 1.04
CASC4-208ENST00000559151 DIXDC1Q155Q3 683 aa21.51■■□□□ 1.03
CASC4-208ENST00000559151 SULF1Q8IWU6 871 aa21.5■■□□□ 1.03
CASC4-208ENST00000559151 SPIRE2Q8WWL2 714 aa21.5■■□□□ 1.03
CASC4-208ENST00000559151 KCNH8Q96L42 1107 aa21.5■■□□□ 1.03
CASC4-208ENST00000559151 MCM6Q14566 821 aa21.48■■□□□ 1.03
CASC4-208ENST00000559151 PSEN2P49810 448 aa21.47■■□□□ 1.03
CASC4-208ENST00000559151 ZBED2Q9BTP6 218 aa21.47■■□□□ 1.03
CASC4-208ENST00000559151 KIAA1468Q9P260 1216 aa21.46■■□□□ 1.03
CASC4-208ENST00000559151 LIMD1Q9UGP4 676 aa21.46■■□□□ 1.03
CASC4-208ENST00000559151 RIC3Q7Z5B4 369 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms