RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 REREQ9P2R6 1566 aa8.96□□□□□ -0.97
CHRNA3-203ENST00000558903 MADDQ8WXG6 1647 aa8.96□□□□□ -0.98
CHRNA3-203ENST00000558903 AFAP1Q8N556 730 aa8.96□□□□□ -0.98
CHRNA3-203ENST00000558903 FBXO3Q9UK99 471 aa8.96□□□□□ -0.98
CHRNA3-203ENST00000558903 SIGLEC1Q9BZZ2 1709 aa8.96□□□□□ -0.98
CHRNA3-203ENST00000558903 PLXNC1O60486 1568 aa8.95□□□□□ -0.98
CHRNA3-203ENST00000558903 MAST1Q9Y2H9 1570 aa8.95□□□□□ -0.98
CHRNA3-203ENST00000558903 TSPY4P0CV99 314 aa8.95□□□□□ -0.98
CHRNA3-203ENST00000558903 TSPY10P0CW01 314 aa8.95□□□□□ -0.98
CHRNA3-203ENST00000558903 FAM50AQ14320 339 aaKnown RBP8.95□□□□□ -0.98
CHRNA3-203ENST00000558903 ZNF644Q9H582 1327 aaPredicted RBP8.95□□□□□ -0.98
CHRNA3-203ENST00000558903 ABCB7O75027 752 aa8.94□□□□□ -0.98
CHRNA3-203ENST00000558903 DSG3P32926 999 aa8.94□□□□□ -0.98
CHRNA3-203ENST00000558903 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
CHRNA3-203ENST00000558903 TCOF1Q13428 1488 aaKnown RBP8.94□□□□□ -0.98
CHRNA3-203ENST00000558903 ADAMTSL3P82987 1691 aa8.94□□□□□ -0.98
CHRNA3-203ENST00000558903 ESF1Q9H501 851 aaKnown RBP8.93□□□□□ -0.98
CHRNA3-203ENST00000558903 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
CHRNA3-203ENST00000558903 CLTCQ00610 1675 aaKnown RBP8.92□□□□□ -0.98
CHRNA3-203ENST00000558903 A2MP01023 1474 aa8.92□□□□□ -0.98
CHRNA3-203ENST00000558903 MBD5Q9P267 1494 aa8.92□□□□□ -0.98
CHRNA3-203ENST00000558903 SHANK2Q9UPX8 1470 aa8.92□□□□□ -0.98
CHRNA3-203ENST00000558903 MLECQ14165 292 aa8.92□□□□□ -0.98
CHRNA3-203ENST00000558903 RTEL1-TNFRSF6BF6WH68 1400 aa8.91□□□□□ -0.98
CHRNA3-203ENST00000558903 DAPK1P53355 1430 aa8.91□□□□□ -0.98
CHRNA3-203ENST00000558903 PROM2Q8N271 834 aa8.91□□□□□ -0.98
CHRNA3-203ENST00000558903 MROH2AA6NES4 1674 aa8.91□□□□□ -0.98
CHRNA3-203ENST00000558903 ZC3H13Q5T200 1668 aaKnown RBP8.9□□□□□ -0.98
CHRNA3-203ENST00000558903 AGLP35573 1532 aa8.9□□□□□ -0.99
CHRNA3-203ENST00000558903 CEP152O94986 1710 aa8.89□□□□□ -0.99
CHRNA3-203ENST00000558903 DUOX2Q9NRD8 1548 aa8.89□□□□□ -0.99
CHRNA3-203ENST00000558903 C3P01024 1663 aa8.88□□□□□ -0.99
CHRNA3-203ENST00000558903 ITGAEP38570 1179 aa8.88□□□□□ -0.99
CHRNA3-203ENST00000558903 CACNB1Q02641 598 aaPredicted RBP8.88□□□□□ -0.99
CHRNA3-203ENST00000558903 GCC2Q8IWJ2 1684 aa8.88□□□□□ -0.99
CHRNA3-203ENST00000558903 RNF17Q9BXT8 1623 aaKnown RBP8.87□□□□□ -0.99
CHRNA3-203ENST00000558903 ANKRD30AQ9BXX3 1397 aa8.87□□□□□ -0.99
CHRNA3-203ENST00000558903 PREX1Q8TCU6 1659 aa8.87□□□□□ -0.99
CHRNA3-203ENST00000558903 ABCC5O15440 1437 aa8.87□□□□□ -0.99
CHRNA3-203ENST00000558903 KIF15Q9NS87 1388 aa8.86□□□□□ -0.99
CHRNA3-203ENST00000558903 CHIC2Q9UKJ5 165 aa8.86□□□□□ -0.99
CHRNA3-203ENST00000558903 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
CHRNA3-203ENST00000558903 PTPRMP28827 1452 aa8.85□□□□□ -0.99
CHRNA3-203ENST00000558903 CAMSAP1Q5T5Y3 1602 aa8.85□□□□□ -0.99
CHRNA3-203ENST00000558903 KDM4FA0A1W2PPD8 638 aa8.85□□□□□ -0.99
CHRNA3-203ENST00000558903 ERBINQ96RT1 1412 aa8.85□□□□□ -0.99
CHRNA3-203ENST00000558903 CNTLNQ9NXG0 1405 aa8.85□□□□□ -0.99
CHRNA3-203ENST00000558903 DHX29Q7Z478 1369 aaKnown RBP8.85□□□□□ -0.99
CHRNA3-203ENST00000558903 FAM135AQ9P2D6 1515 aa8.85□□□□□ -0.99
CHRNA3-203ENST00000558903 KIF3BO15066 747 aa8.84□□□□□ -0.99
CHRNA3-203ENST00000558903 GGT6Q6P531 493 aa8.84□□□□□ -0.99
CHRNA3-203ENST00000558903 RRBP1Q9P2E9 1410 aaKnown RBP8.84□□□□□ -0.99
CHRNA3-203ENST00000558903 CFAP65Q6ZU64 1925 aaKnown RBP8.84□□□□□ -1
CHRNA3-203ENST00000558903 DEPDC5O75140 1603 aa8.83□□□□□ -1
CHRNA3-203ENST00000558903 ADGRL2O95490 1459 aa8.83□□□□□ -1
CHRNA3-203ENST00000558903 RRP7BPQ9NSQ0 103 aa8.83□□□□□ -1
CHRNA3-203ENST00000558903 KANK1Q14678 1352 aa8.83□□□□□ -1
CHRNA3-203ENST00000558903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
CHRNA3-203ENST00000558903 PRDM15P57071 1507 aaPredicted RBP8.82□□□□□ -1
CHRNA3-203ENST00000558903 SPDYE2BA6NHP3 402 aa8.82□□□□□ -1
CHRNA3-203ENST00000558903 SPDYE6P0CI01 402 aa8.82□□□□□ -1
CHRNA3-203ENST00000558903 SPDYE2Q495Y8 402 aa8.82□□□□□ -1
CHRNA3-203ENST00000558903 MYO3AQ8NEV4 1616 aa8.81□□□□□ -1
CHRNA3-203ENST00000558903 UNC13BO14795 1591 aa8.81□□□□□ -1
CHRNA3-203ENST00000558903 MROH1Q8NDA8 1641 aa8.8□□□□□ -1
CHRNA3-203ENST00000558903 RTN4Q9NQC3 1192 aaKnown RBP8.8□□□□□ -1
CHRNA3-203ENST00000558903 NCOA1Q15788 1441 aa8.8□□□□□ -1
CHRNA3-203ENST00000558903 WASHC2CQ9Y4E1 1318 aa8.8□□□□□ -1
CHRNA3-203ENST00000558903 ROCK1Q13464 1354 aa8.79□□□□□ -1
CHRNA3-203ENST00000558903 ABCC3O15438 1527 aa8.79□□□□□ -1
CHRNA3-203ENST00000558903 ANKRD50Q9ULJ7 1429 aa8.79□□□□□ -1
CHRNA3-203ENST00000558903 SETD1BQ9UPS6 1966 aaKnown RBP8.79□□□□□ -1
CHRNA3-203ENST00000558903 TET3O43151 1660 aa8.78□□□□□ -1
CHRNA3-203ENST00000558903 ZNF142P52746 1687 aaPredicted RBP8.78□□□□□ -1
CHRNA3-203ENST00000558903 IQGAP3Q86VI3 1631 aa8.77□□□□□ -1.01
CHRNA3-203ENST00000558903 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
CHRNA3-203ENST00000558903 UHRF1BP1Q6BDS2 1440 aa8.77□□□□□ -1.01
CHRNA3-203ENST00000558903 PTPRKQ15262 1439 aa8.76□□□□□ -1.01
CHRNA3-203ENST00000558903 EFCAB6Q5THR3 1501 aa8.75□□□□□ -1.01
CHRNA3-203ENST00000558903 POLR1AO95602 1720 aaPredicted RBP8.75□□□□□ -1.01
CHRNA3-203ENST00000558903 CEBPAP49715 358 aaPredicted RBP8.75□□□□□ -1.01
CHRNA3-203ENST00000558903 PZPP20742 1482 aa8.75□□□□□ -1.01
CHRNA3-203ENST00000558903 ZMYM3Q14202 1370 aa8.74□□□□□ -1.01
CHRNA3-203ENST00000558903 SPHKAPQ2M3C7 1700 aa8.74□□□□□ -1.01
CHRNA3-203ENST00000558903 CEP170BQ9Y4F5 1589 aaPredicted RBP8.74□□□□□ -1.01
CHRNA3-203ENST00000558903 NPATQ14207 1427 aa8.74□□□□□ -1.01
CHRNA3-203ENST00000558903 SSUH2Q9Y2M2 353 aa8.74□□□□□ -1.01
CHRNA3-203ENST00000558903 E9PCH4 1651 aa8.74□□□□□ -1.01
CHRNA3-203ENST00000558903 VASPP50552 380 aaPredicted RBP8.73□□□□□ -1.01
CHRNA3-203ENST00000558903 VWDEQ8N2E2 1590 aa8.73□□□□□ -1.01
CHRNA3-203ENST00000558903 HFM1A2PYH4 1435 aa8.72□□□□□ -1.01
CHRNA3-203ENST00000558903 LMTK3Q96Q04 1460 aa8.72□□□□□ -1.01
CHRNA3-203ENST00000558903 LMTK2Q8IWU2 1503 aa8.72□□□□□ -1.01
CHRNA3-203ENST00000558903 SPATA31D1Q6ZQQ2 1576 aa8.72□□□□□ -1.01
CHRNA3-203ENST00000558903 NAIPQ13075 1403 aa8.71□□□□□ -1.01
CHRNA3-203ENST00000558903 ERVK-7P63135 1459 aa8.71□□□□□ -1.01
CHRNA3-203ENST00000558903 KIF1BO60333 1816 aa8.71□□□□□ -1.01
CHRNA3-203ENST00000558903 TRIM52Q96A61 297 aa8.71□□□□□ -1.02
CHRNA3-203ENST00000558903 STAG3Q9UJ98 1225 aa8.71□□□□□ -1.02
CHRNA3-203ENST00000558903 NUP155O75694 1391 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms