RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 MYOM3Q5VTT5 1437 aa8.86□□□□□ -0.99
SMAD3-209ENST00000558894 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
SMAD3-209ENST00000558894 PPP6R1Q9UPN7 881 aa8.85□□□□□ -0.99
SMAD3-209ENST00000558894 MIA2Q96PC5 1412 aa8.85□□□□□ -0.99
SMAD3-209ENST00000558894 POLR1AO95602 1720 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-209ENST00000558894 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
SMAD3-209ENST00000558894 ZC3H13Q5T200 1668 aaKnown RBP8.85□□□□□ -0.99
SMAD3-209ENST00000558894 TCOF1Q13428 1488 aaKnown RBP8.84□□□□□ -0.99
SMAD3-209ENST00000558894 CEP152O94986 1710 aa8.84□□□□□ -0.99
SMAD3-209ENST00000558894 GGT6Q6P531 493 aa8.84□□□□□ -0.99
SMAD3-209ENST00000558894 CERKQ8TCT0 537 aa8.84□□□□□ -0.99
SMAD3-209ENST00000558894 PTPN23Q9H3S7 1636 aa8.83□□□□□ -1
SMAD3-209ENST00000558894 ESF1Q9H501 851 aaKnown RBP8.83□□□□□ -1
SMAD3-209ENST00000558894 DEPDC5O75140 1603 aa8.83□□□□□ -1
SMAD3-209ENST00000558894 PZPP20742 1482 aa8.83□□□□□ -1
SMAD3-209ENST00000558894 PLA2R1Q13018 1463 aa8.83□□□□□ -1
SMAD3-209ENST00000558894 SPATA31D1Q6ZQQ2 1576 aa8.82□□□□□ -1
SMAD3-209ENST00000558894 NEURL4Q96JN8 1562 aa8.82□□□□□ -1
SMAD3-209ENST00000558894 ABCC3O15438 1527 aa8.82□□□□□ -1
SMAD3-209ENST00000558894 A2ML1A8K2U0 1454 aa8.82□□□□□ -1
SMAD3-209ENST00000558894 ABCC5O15440 1437 aa8.81□□□□□ -1
SMAD3-209ENST00000558894 KIF3BO15066 747 aa8.81□□□□□ -1
SMAD3-209ENST00000558894 DMRT2Q9Y5R5 561 aa8.81□□□□□ -1
SMAD3-209ENST00000558894 CFAP65Q6ZU64 1925 aaKnown RBP8.81□□□□□ -1
SMAD3-209ENST00000558894 FBXO31Q5XUX0 539 aaPredicted RBP8.8□□□□□ -1
SMAD3-209ENST00000558894 PHF23Q9BUL5 403 aaPredicted RBP8.8□□□□□ -1
SMAD3-209ENST00000558894 SHANK2Q9UPX8 1470 aa8.8□□□□□ -1
SMAD3-209ENST00000558894 PRDM15P57071 1507 aaPredicted RBP8.8□□□□□ -1
SMAD3-209ENST00000558894 DUOX2Q9NRD8 1548 aa8.8□□□□□ -1
SMAD3-209ENST00000558894 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
SMAD3-209ENST00000558894 UBR1Q8IWV7 1749 aa8.79□□□□□ -1
SMAD3-209ENST00000558894 FGD6Q6ZV73 1430 aa8.79□□□□□ -1
SMAD3-209ENST00000558894 IQSEC2Q5JU85 1478 aa8.78□□□□□ -1
SMAD3-209ENST00000558894 TSPY4P0CV99 314 aa8.78□□□□□ -1
SMAD3-209ENST00000558894 TSPY10P0CW01 314 aa8.78□□□□□ -1
SMAD3-209ENST00000558894 DAPK1P53355 1430 aa8.78□□□□□ -1
SMAD3-209ENST00000558894 VWDEQ8N2E2 1590 aa8.78□□□□□ -1
SMAD3-209ENST00000558894 TNRQ92752 1358 aa8.77□□□□□ -1.01
SMAD3-209ENST00000558894 STRCP1A6NGW2 1772 aa8.77□□□□□ -1.01
SMAD3-209ENST00000558894 WASHC2CQ9Y4E1 1318 aa8.77□□□□□ -1.01
SMAD3-209ENST00000558894 ERBINQ96RT1 1412 aa8.76□□□□□ -1.01
SMAD3-209ENST00000558894 ERVK-7P63135 1459 aa8.76□□□□□ -1.01
SMAD3-209ENST00000558894 NLRP1Q9C000 1473 aa8.76□□□□□ -1.01
SMAD3-209ENST00000558894 SRCAPQ6ZRS2 3230 aa8.75□□□□□ -1.01
SMAD3-209ENST00000558894 UGGT1Q9NYU2 1555 aa8.75□□□□□ -1.01
SMAD3-209ENST00000558894 PKD2Q13563 968 aa8.75□□□□□ -1.01
SMAD3-209ENST00000558894 MED14O60244 1454 aa8.75□□□□□ -1.01
SMAD3-209ENST00000558894 ZNF335Q9H4Z2 1342 aaPredicted RBP8.75□□□□□ -1.01
SMAD3-209ENST00000558894 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
SMAD3-209ENST00000558894 ARHGAP31Q2M1Z3 1444 aa8.74□□□□□ -1.01
SMAD3-209ENST00000558894 ADGRL2O95490 1459 aa8.74□□□□□ -1.01
SMAD3-209ENST00000558894 LMTK2Q8IWU2 1503 aa8.74□□□□□ -1.01
SMAD3-209ENST00000558894 KIF15Q9NS87 1388 aa8.73□□□□□ -1.01
SMAD3-209ENST00000558894 PIK3C2BO00750 1634 aa8.73□□□□□ -1.01
SMAD3-209ENST00000558894 ALKQ9UM73 1620 aa8.73□□□□□ -1.01
SMAD3-209ENST00000558894 KDM5AP29375 1690 aaKnown RBP8.73□□□□□ -1.01
SMAD3-209ENST00000558894 XIRP1Q702N8 1843 aaKnown RBP8.73□□□□□ -1.01
SMAD3-209ENST00000558894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMAD3-209ENST00000558894 SYNMO15061 1565 aa8.72□□□□□ -1.01
SMAD3-209ENST00000558894 ARHGAP23Q9P227 1491 aa8.71□□□□□ -1.01
SMAD3-209ENST00000558894 SENP3Q9H4L4 574 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-209ENST00000558894 RRP7BPQ9NSQ0 103 aa8.71□□□□□ -1.02
SMAD3-209ENST00000558894 MYO5BQ9ULV0 1848 aa8.7□□□□□ -1.02
SMAD3-209ENST00000558894 SLIT1O75093 1534 aa8.7□□□□□ -1.02
SMAD3-209ENST00000558894 EFCAB6Q5THR3 1501 aa8.7□□□□□ -1.02
SMAD3-209ENST00000558894 UNC13BO14795 1591 aa8.69□□□□□ -1.02
SMAD3-209ENST00000558894 GCC2Q8IWJ2 1684 aa8.69□□□□□ -1.02
SMAD3-209ENST00000558894 APLP2Q06481 763 aa8.69□□□□□ -1.02
SMAD3-209ENST00000558894 THEMISQ8N1K5 641 aaPredicted RBP8.69□□□□□ -1.02
SMAD3-209ENST00000558894 ANKRD30AQ9BXX3 1397 aa8.69□□□□□ -1.02
SMAD3-209ENST00000558894 NPHP4O75161 1426 aaPredicted RBP8.69□□□□□ -1.02
SMAD3-209ENST00000558894 CPS1P31327 1500 aa8.69□□□□□ -1.02
SMAD3-209ENST00000558894 TET3O43151 1660 aa8.69□□□□□ -1.02
SMAD3-209ENST00000558894 CHIC2Q9UKJ5 165 aa8.68□□□□□ -1.02
SMAD3-209ENST00000558894 NOS1P29475 1434 aa8.68□□□□□ -1.02
SMAD3-209ENST00000558894 E9PCH4 1651 aa8.68□□□□□ -1.02
SMAD3-209ENST00000558894 ANKLE2Q86XL3 938 aa8.67□□□□□ -1.02
SMAD3-209ENST00000558894 LTKP29376 864 aa8.66□□□□□ -1.02
SMAD3-209ENST00000558894 IQGAP3Q86VI3 1631 aa8.65□□□□□ -1.02
SMAD3-209ENST00000558894 LRRC7Q96NW7 1537 aa8.65□□□□□ -1.02
SMAD3-209ENST00000558894 SCAF11Q99590 1463 aaKnown RBP8.65□□□□□ -1.02
SMAD3-209ENST00000558894 ANKRD50Q9ULJ7 1429 aa8.65□□□□□ -1.02
SMAD3-209ENST00000558894 TMEM131LA2VDJ0 1609 aa8.65□□□□□ -1.03
SMAD3-209ENST00000558894 ADGRB3O60242 1522 aa8.64□□□□□ -1.03
SMAD3-209ENST00000558894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.64□□□□□ -1.032e-8■■□□□ 13.2
SMAD3-209ENST00000558894 RPRD2Q5VT52 1461 aaKnown RBP8.64□□□□□ -1.03
SMAD3-209ENST00000558894 ROCK1Q13464 1354 aa8.63□□□□□ -1.03
SMAD3-209ENST00000558894 TMEM2Q9UHN6 1383 aa8.63□□□□□ -1.03
SMAD3-209ENST00000558894 IDI1Q13907 227 aa8.63□□□□□ -1.03
SMAD3-209ENST00000558894 FAM50AQ14320 339 aaKnown RBP8.63□□□□□ -1.03
SMAD3-209ENST00000558894 KANK1Q14678 1352 aa8.62□□□□□ -1.03
SMAD3-209ENST00000558894 CHD2O14647 1828 aaKnown RBP8.62□□□□□ -1.03
SMAD3-209ENST00000558894 NWD1Q149M9 1564 aa8.61□□□□□ -1.03
SMAD3-209ENST00000558894 UBAP1LF5GYI3 381 aa8.61□□□□□ -1.03
SMAD3-209ENST00000558894 ZFYVE9O95405 1425 aa8.61□□□□□ -1.03
SMAD3-209ENST00000558894 TXNDC2Q86VQ3 553 aa8.6□□□□□ -1.03
SMAD3-209ENST00000558894 SPHKAPQ2M3C7 1700 aa8.6□□□□□ -1.03
SMAD3-209ENST00000558894 PPARGC1BQ86YN6 1023 aaKnown RBP8.59□□□□□ -1.03
SMAD3-209ENST00000558894 RRBP1Q9P2E9 1410 aaKnown RBP8.59□□□□□ -1.03
SMAD3-209ENST00000558894 HSPA1LP34931 641 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms