RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CEP170BQ9Y4F5 1589 aaPredicted RBP26.77■■□□□ 1.88
LRRC28-210ENST00000558879 GGT6Q6P531 493 aa26.77■■□□□ 1.88
LRRC28-210ENST00000558879 FGD6Q6ZV73 1430 aa26.76■■□□□ 1.87
LRRC28-210ENST00000558879 ILDR1Q86SU0 546 aaPredicted RBP26.75■■□□□ 1.87
LRRC28-210ENST00000558879 TSPY4P0CV99 314 aa26.74■■□□□ 1.87
LRRC28-210ENST00000558879 TSPY10P0CW01 314 aa26.74■■□□□ 1.87
LRRC28-210ENST00000558879 APLP2Q06481 763 aa26.74■■□□□ 1.87
LRRC28-210ENST00000558879 CEP152O94986 1710 aa26.73■■□□□ 1.87
LRRC28-210ENST00000558879 DUOX2Q9NRD8 1548 aa26.72■■□□□ 1.87
LRRC28-210ENST00000558879 CAMSAP1Q5T5Y3 1602 aa26.72■■□□□ 1.87
LRRC28-210ENST00000558879 PZPP20742 1482 aa26.71■■□□□ 1.87
LRRC28-210ENST00000558879 NCOA1Q15788 1441 aa26.71■■□□□ 1.87
LRRC28-210ENST00000558879 KIF3BO15066 747 aa26.7■■□□□ 1.86
LRRC28-210ENST00000558879 ABCC5O15440 1437 aa26.7■■□□□ 1.86
LRRC28-210ENST00000558879 DEPDC5O75140 1603 aa26.68■■□□□ 1.86
LRRC28-210ENST00000558879 DAPK1P53355 1430 aa26.68■■□□□ 1.86
LRRC28-210ENST00000558879 ABCC3O15438 1527 aa26.67■■□□□ 1.86
LRRC28-210ENST00000558879 PRDM15P57071 1507 aaPredicted RBP26.67■■□□□ 1.86
LRRC28-210ENST00000558879 PTPRTO14522 1441 aa26.65■■□□□ 1.86
LRRC28-210ENST00000558879 POLR1AO95602 1720 aaPredicted RBP26.65■■□□□ 1.86
LRRC28-210ENST00000558879 PLA2R1Q13018 1463 aa26.65■■□□□ 1.86
LRRC28-210ENST00000558879 A2ML1A8K2U0 1454 aa26.62■■□□□ 1.85
LRRC28-210ENST00000558879 ERBINQ96RT1 1412 aa26.62■■□□□ 1.85
LRRC28-210ENST00000558879 SPATA31D1Q6ZQQ2 1576 aa26.6■■□□□ 1.85
LRRC28-210ENST00000558879 KIF15Q9NS87 1388 aa26.59■■□□□ 1.85
LRRC28-210ENST00000558879 CFAP65Q6ZU64 1925 aaKnown RBP26.59■■□□□ 1.85
LRRC28-210ENST00000558879 DMRT2Q9Y5R5 561 aa26.58■■□□□ 1.85
LRRC28-210ENST00000558879 ADGRL2O95490 1459 aa26.57■■□□□ 1.84
LRRC28-210ENST00000558879 FBXO41Q8TF61 875 aa26.57■■□□□ 1.84
LRRC28-210ENST00000558879 WASHC2CQ9Y4E1 1318 aa26.56■■□□□ 1.84
LRRC28-210ENST00000558879 TNRQ92752 1358 aa26.55■■□□□ 1.84
LRRC28-210ENST00000558879 LTBP4Q8N2S1 1624 aa26.54■■□□□ 1.84
LRRC28-210ENST00000558879 VWDEQ8N2E2 1590 aa26.52■■□□□ 1.84
LRRC28-210ENST00000558879 NEURL4Q96JN8 1562 aa26.52■■□□□ 1.84
LRRC28-210ENST00000558879 NLRP1Q9C000 1473 aa26.52■■□□□ 1.84
LRRC28-210ENST00000558879 ERVK-7P63135 1459 aa26.51■■□□□ 1.83
LRRC28-210ENST00000558879 FBXO31Q5XUX0 539 aaPredicted RBP26.5■■□□□ 1.83
LRRC28-210ENST00000558879 ANKRD30AQ9BXX3 1397 aa26.48■■□□□ 1.83
LRRC28-210ENST00000558879 UBR1Q8IWV7 1749 aa26.48■■□□□ 1.83
LRRC28-210ENST00000558879 CERKQ8TCT0 537 aa26.47■■□□□ 1.83
LRRC28-210ENST00000558879 UGGT1Q9NYU2 1555 aa26.46■■□□□ 1.83
LRRC28-210ENST00000558879 LMTK2Q8IWU2 1503 aa26.46■■□□□ 1.83
LRRC28-210ENST00000558879 ARHGAP31Q2M1Z3 1444 aa26.46■■□□□ 1.83
LRRC28-210ENST00000558879 RRP7BPQ9NSQ0 103 aa26.44■■□□□ 1.82
LRRC28-210ENST00000558879 PKD2Q13563 968 aa26.43■■□□□ 1.82
LRRC28-210ENST00000558879 IQSEC2Q5JU85 1478 aa26.41■■□□□ 1.82
LRRC28-210ENST00000558879 NCKAP5LQ9HCH0 1330 aa26.4■■□□□ 1.82
LRRC28-210ENST00000558879 EFCAB6Q5THR3 1501 aa26.39■■□□□ 1.82
LRRC28-210ENST00000558879 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
LRRC28-210ENST00000558879 UNC13BO14795 1591 aa26.38■■□□□ 1.81
LRRC28-210ENST00000558879 CHIC2Q9UKJ5 165 aa26.37■■□□□ 1.81
LRRC28-210ENST00000558879 IQGAP1P46940 1657 aa26.37■■□□□ 1.81
LRRC28-210ENST00000558879 GCC2Q8IWJ2 1684 aa26.36■■□□□ 1.81
LRRC28-210ENST00000558879 PIK3C2BO00750 1634 aa26.36■■□□□ 1.81
LRRC28-210ENST00000558879 FAM50AQ14320 339 aaKnown RBP26.35■■□□□ 1.81
LRRC28-210ENST00000558879 TET3O43151 1660 aa26.34■■□□□ 1.81
LRRC28-210ENST00000558879 MED14O60244 1454 aa26.34■■□□□ 1.81
LRRC28-210ENST00000558879 SYNMO15061 1565 aa26.33■■□□□ 1.81
LRRC28-210ENST00000558879 KANK1Q14678 1352 aa26.33■■□□□ 1.8
LRRC28-210ENST00000558879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.33■■□□□ 1.8
LRRC28-210ENST00000558879 ANKRD50Q9ULJ7 1429 aa26.32■■□□□ 1.8
LRRC28-210ENST00000558879 SLIT1O75093 1534 aa26.29■■□□□ 1.8
LRRC28-210ENST00000558879 ZNF335Q9H4Z2 1342 aaPredicted RBP26.28■■□□□ 1.8
LRRC28-210ENST00000558879 ROCK1Q13464 1354 aa26.28■■□□□ 1.8
LRRC28-210ENST00000558879 THEMISQ8N1K5 641 aaPredicted RBP26.27■■□□□ 1.8
LRRC28-210ENST00000558879 ARHGAP23Q9P227 1491 aa26.27■■□□□ 1.8
LRRC28-210ENST00000558879 IQGAP3Q86VI3 1631 aa26.27■■□□□ 1.8
LRRC28-210ENST00000558879 STRCP1A6NGW2 1772 aa26.25■■□□□ 1.79
LRRC28-210ENST00000558879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.25■■□□□ 1.79
LRRC28-210ENST00000558879 MYO5BQ9ULV0 1848 aa26.25■■□□□ 1.79
LRRC28-210ENST00000558879 RPRD2Q5VT52 1461 aaKnown RBP26.24■■□□□ 1.79
LRRC28-210ENST00000558879 NPHP4O75161 1426 aaPredicted RBP26.24■■□□□ 1.79
LRRC28-210ENST00000558879 NOS1P29475 1434 aa26.24■■□□□ 1.79
LRRC28-210ENST00000558879 E9PCH4 1651 aa26.24■■□□□ 1.79
LRRC28-210ENST00000558879 CPS1P31327 1500 aa26.23■■□□□ 1.79
LRRC28-210ENST00000558879 ADGRB3O60242 1522 aa26.21■■□□□ 1.79
LRRC28-210ENST00000558879 ANKLE2Q86XL3 938 aa26.21■■□□□ 1.79
LRRC28-210ENST00000558879 RRBP1Q9P2E9 1410 aaKnown RBP26.21■■□□□ 1.79
LRRC28-210ENST00000558879 SCAF11Q99590 1463 aaKnown RBP26.2■■□□□ 1.78
LRRC28-210ENST00000558879 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
LRRC28-210ENST00000558879 TMEM131LA2VDJ0 1609 aa26.1■■□□□ 1.77
LRRC28-210ENST00000558879 XIRP1Q702N8 1843 aaKnown RBP26.1■■□□□ 1.77
LRRC28-210ENST00000558879 TMEM2Q9UHN6 1383 aa26.09■■□□□ 1.77
LRRC28-210ENST00000558879 SPHKAPQ2M3C7 1700 aa26.08■■□□□ 1.77
LRRC28-210ENST00000558879 IDI1Q13907 227 aa26.06■■□□□ 1.76
LRRC28-210ENST00000558879 LTKP29376 864 aa26.05■■□□□ 1.76
LRRC28-210ENST00000558879 ALKQ9UM73 1620 aa26.04■■□□□ 1.76
LRRC28-210ENST00000558879 ITGAEP38570 1179 aa26.02■■□□□ 1.76
LRRC28-210ENST00000558879 LRRC7Q96NW7 1537 aa26.01■■□□□ 1.75
LRRC28-210ENST00000558879 SLC52A1Q9NWF4 448 aa26.01■■□□□ 1.75
LRRC28-210ENST00000558879 ZFYVE9O95405 1425 aa25.99■■□□□ 1.75
LRRC28-210ENST00000558879 TXNDC2Q86VQ3 553 aa25.99■■□□□ 1.75
LRRC28-210ENST00000558879 NWD1Q149M9 1564 aa25.99■■□□□ 1.75
LRRC28-210ENST00000558879 NAIPQ13075 1403 aa25.97■■□□□ 1.75
LRRC28-210ENST00000558879 NUP155O75694 1391 aa25.97■■□□□ 1.75
LRRC28-210ENST00000558879 STAG3Q9UJ98 1225 aa25.96■■□□□ 1.75
LRRC28-210ENST00000558879 EID1Q9Y6B2 187 aa25.96■■□□□ 1.75
LRRC28-210ENST00000558879 CHD2O14647 1828 aaKnown RBP25.95■■□□□ 1.74
LRRC28-210ENST00000558879 UBAP1LF5GYI3 381 aa25.94■■□□□ 1.74
LRRC28-210ENST00000558879 HFM1A2PYH4 1435 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms