RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 EFCAB3Q8N7B9 438 aa9.45□□□□□ -0.9
LRRC28-208ENST00000558771 BCL11BQ9C0K0 894 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-208ENST00000558771 OCEL1Q9H607 264 aa9.45□□□□□ -0.9
LRRC28-208ENST00000558771 GOLGA3Q08378 1498 aa9.45□□□□□ -0.9
LRRC28-208ENST00000558771 ADAMTSL3P82987 1691 aa9.45□□□□□ -0.9
LRRC28-208ENST00000558771 STK25O00506 426 aa9.44□□□□□ -0.9
LRRC28-208ENST00000558771 PLCG2P16885 1265 aa9.44□□□□□ -0.9
LRRC28-208ENST00000558771 STK24Q9Y6E0 443 aa9.44□□□□□ -0.9
LRRC28-208ENST00000558771 RTN4Q9NQC3 1192 aaKnown RBP9.43□□□□□ -0.9
LRRC28-208ENST00000558771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.43□□□□□ -0.9
LRRC28-208ENST00000558771 ARID3CA6NKF2 412 aa9.42□□□□□ -0.9
LRRC28-208ENST00000558771 RAPGEF3O95398 923 aa9.41□□□□□ -0.9
LRRC28-208ENST00000558771 POTEJP0CG39 1038 aa9.41□□□□□ -0.9
LRRC28-208ENST00000558771 BCORL1Q5H9F3 1711 aa9.41□□□□□ -0.9
LRRC28-208ENST00000558771 PCF11O94913 1555 aaKnown RBP9.41□□□□□ -0.9
LRRC28-208ENST00000558771 ATP10BO94823 1461 aa9.4□□□□□ -0.9
LRRC28-208ENST00000558771 PHLDB1Q86UU1 1377 aa9.4□□□□□ -0.9
LRRC28-208ENST00000558771 ABCA9Q8IUA7 1624 aa9.4□□□□□ -0.9
LRRC28-208ENST00000558771 MADDQ8WXG6 1647 aa9.4□□□□□ -0.9
LRRC28-208ENST00000558771 LMTK3Q96Q04 1460 aa9.4□□□□□ -0.91
LRRC28-208ENST00000558771 SOX12O15370 315 aa9.39□□□□□ -0.91
LRRC28-208ENST00000558771 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
LRRC28-208ENST00000558771 FRMPD1Q5SYB0 1578 aa9.37□□□□□ -0.91
LRRC28-208ENST00000558771 ARID4BQ4LE39 1312 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-208ENST00000558771 NEO1Q92859 1461 aa9.37□□□□□ -0.91
LRRC28-208ENST00000558771 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
LRRC28-208ENST00000558771 P3H3Q8IVL6 736 aa9.37□□□□□ -0.91
LRRC28-208ENST00000558771 PRXQ9BXM0 1461 aa9.36□□□□□ -0.91
LRRC28-208ENST00000558771 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
LRRC28-208ENST00000558771 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
LRRC28-208ENST00000558771 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
LRRC28-208ENST00000558771 RIMS1Q86UR5 1692 aaKnown RBP9.36□□□□□ -0.91
LRRC28-208ENST00000558771 HSPA2P54652 639 aa9.35□□□□□ -0.91
LRRC28-208ENST00000558771 MAMSTRQ6ZN01 415 aa9.35□□□□□ -0.91
LRRC28-208ENST00000558771 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
LRRC28-208ENST00000558771 FAM9AQ8IZU1 332 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-208ENST00000558771 ARHGEF40Q8TER5 1519 aa9.34□□□□□ -0.91
LRRC28-208ENST00000558771 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
LRRC28-208ENST00000558771 NLRP6P59044 892 aa9.32□□□□□ -0.92
LRRC28-208ENST00000558771 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
LRRC28-208ENST00000558771 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-208ENST00000558771 RICTORQ6R327 1708 aa9.31□□□□□ -0.92
LRRC28-208ENST00000558771 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
LRRC28-208ENST00000558771 DENND4BO75064 1496 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-208ENST00000558771 SAMD9Q5K651 1589 aa9.31□□□□□ -0.92
LRRC28-208ENST00000558771 MS4A4AQ96JQ5 239 aa9.3□□□□□ -0.92
LRRC28-208ENST00000558771 MFRPQ9BY79 579 aa9.3□□□□□ -0.92
LRRC28-208ENST00000558771 SIGLEC1Q9BZZ2 1709 aa9.3□□□□□ -0.92
LRRC28-208ENST00000558771 FHOD3Q2V2M9 1422 aa9.3□□□□□ -0.92
LRRC28-208ENST00000558771 AKNAQ7Z591 1439 aa9.3□□□□□ -0.92
LRRC28-208ENST00000558771 FANCAO15360 1455 aa9.29□□□□□ -0.92
LRRC28-208ENST00000558771 NUP153P49790 1475 aaKnown RBP9.29□□□□□ -0.92
LRRC28-208ENST00000558771 FBXO22Q8NEZ5 403 aa9.29□□□□□ -0.92
LRRC28-208ENST00000558771 POGZQ7Z3K3 1410 aa9.29□□□□□ -0.92
LRRC28-208ENST00000558771 YEATS2Q9ULM3 1422 aa9.28□□□□□ -0.92
LRRC28-208ENST00000558771 ZMYM4Q5VZL5 1548 aa9.27□□□□□ -0.93
LRRC28-208ENST00000558771 ZFYVE16Q7Z3T8 1539 aa9.27□□□□□ -0.93
LRRC28-208ENST00000558771 MLECQ14165 292 aa9.27□□□□□ -0.93
LRRC28-208ENST00000558771 ILDR2Q71H61 639 aa9.27□□□□□ -0.93
LRRC28-208ENST00000558771 CFAP74Q9C0B2 1584 aa9.27□□□□□ -0.93
LRRC28-208ENST00000558771 EFCAB5A4FU69 1503 aa9.26□□□□□ -0.93
LRRC28-208ENST00000558771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.26□□□□□ -0.93
LRRC28-208ENST00000558771 PLEKHD1A6NEE1 506 aa9.26□□□□□ -0.93
LRRC28-208ENST00000558771 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
LRRC28-208ENST00000558771 FER1L4A9Z1Z3 1794 aa9.26□□□□□ -0.93
LRRC28-208ENST00000558771 DISP3Q9P2K9 1392 aa9.25□□□□□ -0.93
LRRC28-208ENST00000558771 TTC37Q6PGP7 1564 aa9.25□□□□□ -0.93
LRRC28-208ENST00000558771 G3V3G9 751 aa9.25□□□□□ -0.93
LRRC28-208ENST00000558771 HECW1Q76N89 1606 aa9.24□□□□□ -0.93
LRRC28-208ENST00000558771 MAGI2Q86UL8 1455 aa9.24□□□□□ -0.93
LRRC28-208ENST00000558771 POTEMA6NI47 508 aa9.24□□□□□ -0.93
LRRC28-208ENST00000558771 RANGAP1P46060 587 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-208ENST00000558771 NKX1-1Q15270 411 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-208ENST00000558771 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.24□□□□□ -0.93
LRRC28-208ENST00000558771 SOCS7O14512 581 aa9.23□□□□□ -0.93
LRRC28-208ENST00000558771 PREX1Q8TCU6 1659 aa9.23□□□□□ -0.93
LRRC28-208ENST00000558771 ARHGEF12Q9NZN5 1544 aa9.22□□□□□ -0.93
LRRC28-208ENST00000558771 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
LRRC28-208ENST00000558771 TMEM121BQ9BXQ6 578 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-208ENST00000558771 SCAPERQ9BY12 1400 aa9.22□□□□□ -0.93
LRRC28-208ENST00000558771 CEBPAP49715 358 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-208ENST00000558771 SLAIN1Q8ND83 568 aa9.21□□□□□ -0.94
LRRC28-208ENST00000558771 STRCQ7RTU9 1775 aa9.21□□□□□ -0.94
LRRC28-208ENST00000558771 POTEGQ6S5H5 508 aa9.2□□□□□ -0.94
LRRC28-208ENST00000558771 MICALL2Q8IY33 904 aa9.2□□□□□ -0.94
LRRC28-208ENST00000558771 PLCH2O75038 1416 aa9.2□□□□□ -0.94
LRRC28-208ENST00000558771 C9orf84Q5VXU9 1444 aa9.2□□□□□ -0.94
LRRC28-208ENST00000558771 ATP10AO60312 1499 aa9.2□□□□□ -0.94
LRRC28-208ENST00000558771 PPP1R37O75864 691 aa9.19□□□□□ -0.94
LRRC28-208ENST00000558771 CDK13Q14004 1512 aaKnown RBP9.19□□□□□ -0.94
LRRC28-208ENST00000558771 UHRF1BP1Q6BDS2 1440 aa9.18□□□□□ -0.94
LRRC28-208ENST00000558771 SPATA31D1Q6ZQQ2 1576 aa9.18□□□□□ -0.94
LRRC28-208ENST00000558771 SETD1BQ9UPS6 1966 aaKnown RBP9.16□□□□□ -0.94
LRRC28-208ENST00000558771 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-208ENST00000558771 RYDENQ9NUL5 291 aaKnown RBP9.16□□□□□ -0.94
LRRC28-208ENST00000558771 GTPBP6O43824 516 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-208ENST00000558771 EFCAB2Q5VUJ9 269 aa9.15□□□□□ -0.94
LRRC28-208ENST00000558771 PTPRTO14522 1441 aa9.14□□□□□ -0.95
LRRC28-208ENST00000558771 MYO5CQ9NQX4 1742 aa9.14□□□□□ -0.95
LRRC28-208ENST00000558771 ZNF518AQ6AHZ1 1483 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms