RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 SEMA3EO15041 775 aa12.89□□□□□ -0.35
PSMA4-208ENST00000558639 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
PSMA4-208ENST00000558639 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
PSMA4-208ENST00000558639 TESPA1A2RU30 521 aaPredicted RBP12.87□□□□□ -0.35
PSMA4-208ENST00000558639 SLC39A7Q92504 469 aa12.87□□□□□ -0.35
PSMA4-208ENST00000558639 DSG2Q14126 1118 aa12.86□□□□□ -0.35
PSMA4-208ENST00000558639 FOXK1P85037 733 aa12.85□□□□□ -0.35
PSMA4-208ENST00000558639 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
PSMA4-208ENST00000558639 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
PSMA4-208ENST00000558639 IGF1RP08069 1367 aa12.83□□□□□ -0.36
PSMA4-208ENST00000558639 C7P10643 843 aa12.83□□□□□ -0.36
PSMA4-208ENST00000558639 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.36
PSMA4-208ENST00000558639 SHROOM2Q13796 1616 aa12.83□□□□□ -0.36
PSMA4-208ENST00000558639 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
PSMA4-208ENST00000558639 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
PSMA4-208ENST00000558639 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
PSMA4-208ENST00000558639 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
PSMA4-208ENST00000558639 DPYSL4O14531 572 aa12.77□□□□□ -0.37
PSMA4-208ENST00000558639 KIF3CO14782 793 aa12.77□□□□□ -0.37
PSMA4-208ENST00000558639 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
PSMA4-208ENST00000558639 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
PSMA4-208ENST00000558639 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
PSMA4-208ENST00000558639 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
PSMA4-208ENST00000558639 KIAA0586Q9BVV6 1533 aa12.76□□□□□ -0.37
PSMA4-208ENST00000558639 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
PSMA4-208ENST00000558639 PTPRGP23470 1445 aa12.73□□□□□ -0.37
PSMA4-208ENST00000558639 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
PSMA4-208ENST00000558639 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
PSMA4-208ENST00000558639 ZC3H15Q8WU90 426 aaKnown RBP12.71□□□□□ -0.37
PSMA4-208ENST00000558639 KIF13AQ9H1H9 1805 aa12.7□□□□□ -0.38
PSMA4-208ENST00000558639 PDIA6Q15084 440 aa12.7□□□□□ -0.38
PSMA4-208ENST00000558639 CUL7Q14999 1698 aa12.7□□□□□ -0.38
PSMA4-208ENST00000558639 POTEFA5A3E0 1075 aa12.69□□□□□ -0.38
PSMA4-208ENST00000558639 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
PSMA4-208ENST00000558639 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
PSMA4-208ENST00000558639 CARMIL2Q6F5E8 1435 aa12.69□□□□□ -0.38
PSMA4-208ENST00000558639 TMEM92Q6UXU6 159 aa12.68□□□□□ -0.38
PSMA4-208ENST00000558639 MLLT3P42568 568 aaPredicted RBP12.67□□□□□ -0.38
PSMA4-208ENST00000558639 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
PSMA4-208ENST00000558639 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
PSMA4-208ENST00000558639 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
PSMA4-208ENST00000558639 MAPKBP1O60336 1514 aa12.64□□□□□ -0.39
PSMA4-208ENST00000558639 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
PSMA4-208ENST00000558639 TBC1D12O60347 775 aa12.63□□□□□ -0.39
PSMA4-208ENST00000558639 RBM26Q5T8P6 1007 aaKnown RBP12.62□□□□□ -0.39
PSMA4-208ENST00000558639 RAPGEF2Q9Y4G8 1499 aa12.61□□□□□ -0.39
PSMA4-208ENST00000558639 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
PSMA4-208ENST00000558639 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
PSMA4-208ENST00000558639 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
PSMA4-208ENST00000558639 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
PSMA4-208ENST00000558639 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
PSMA4-208ENST00000558639 ZMYND10O75800 440 aa12.59□□□□□ -0.39
PSMA4-208ENST00000558639 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
PSMA4-208ENST00000558639 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
PSMA4-208ENST00000558639 GRXCR2A6NFK2 248 aa12.58□□□□□ -0.4
PSMA4-208ENST00000558639 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
PSMA4-208ENST00000558639 ABCC2Q92887 1545 aa12.57□□□□□ -0.4
PSMA4-208ENST00000558639 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
PSMA4-208ENST00000558639 KCNH8Q96L42 1107 aa12.57□□□□□ -0.4
PSMA4-208ENST00000558639 KDM6BO15054 1643 aa12.57□□□□□ -0.4
PSMA4-208ENST00000558639 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
PSMA4-208ENST00000558639 PLB1Q6P1J6 1458 aa12.55□□□□□ -0.4
PSMA4-208ENST00000558639 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
PSMA4-208ENST00000558639 DISP1Q96F81 1524 aa12.55□□□□□ -0.4
PSMA4-208ENST00000558639 EVI5O60447 810 aa12.54□□□□□ -0.4
PSMA4-208ENST00000558639 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
PSMA4-208ENST00000558639 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
PSMA4-208ENST00000558639 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
PSMA4-208ENST00000558639 UHRF1BP1LA0JNW5 1464 aa12.53□□□□□ -0.4
PSMA4-208ENST00000558639 ARID3CA6NKF2 412 aa12.52□□□□□ -0.41
PSMA4-208ENST00000558639 PTGER2P43116 358 aa12.52□□□□□ -0.41
PSMA4-208ENST00000558639 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.41
PSMA4-208ENST00000558639 SLC34A2O95436 690 aa12.51□□□□□ -0.41
PSMA4-208ENST00000558639 UGGT2Q9NYU1 1516 aa12.5□□□□□ -0.41
PSMA4-208ENST00000558639 DDX12PQ92771 950 aa12.49□□□□□ -0.41
PSMA4-208ENST00000558639 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
PSMA4-208ENST00000558639 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
PSMA4-208ENST00000558639 KIAA0556O60303 1618 aa12.47□□□□□ -0.41
PSMA4-208ENST00000558639 GLI2P10070 1586 aa12.47□□□□□ -0.41
PSMA4-208ENST00000558639 EPRSP07814 1512 aaKnown RBP12.47□□□□□ -0.41
PSMA4-208ENST00000558639 OSBPP22059 807 aa12.46□□□□□ -0.41
PSMA4-208ENST00000558639 GOLGA3Q08378 1498 aa12.46□□□□□ -0.42
PSMA4-208ENST00000558639 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
PSMA4-208ENST00000558639 AK7Q96M32 723 aa12.45□□□□□ -0.42
PSMA4-208ENST00000558639 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
PSMA4-208ENST00000558639 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
PSMA4-208ENST00000558639 TMEM132AQ24JP5 1023 aa12.44□□□□□ -0.42
PSMA4-208ENST00000558639 CTTNBP2Q8WZ74 1663 aa12.43□□□□□ -0.42
PSMA4-208ENST00000558639 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
PSMA4-208ENST00000558639 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
PSMA4-208ENST00000558639 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
PSMA4-208ENST00000558639 PPRC1Q5VV67 1664 aaKnown RBP12.42□□□□□ -0.42
PSMA4-208ENST00000558639 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
PSMA4-208ENST00000558639 WDR7Q9Y4E6 1490 aa12.41□□□□□ -0.42
PSMA4-208ENST00000558639 CD109Q6YHK3 1445 aa12.41□□□□□ -0.42
PSMA4-208ENST00000558639 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
PSMA4-208ENST00000558639 FCHSD2O94868 740 aa12.39□□□□□ -0.43
PSMA4-208ENST00000558639 MAP3K4Q9Y6R4 1608 aa12.39□□□□□ -0.43
PSMA4-208ENST00000558639 EPAS1Q99814 870 aa12.38□□□□□ -0.43
PSMA4-208ENST00000558639 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms