RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 RDXP35241 583 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-201ENST00000558282 TPM1P09493 284 aa14.45□□□□□ -0.1
CSPG4P12-201ENST00000558282 MNS1Q8NEH6 495 aa14.45□□□□□ -0.1
CSPG4P12-201ENST00000558282 RAB3GAP2Q9H2M9 1393 aa14.44□□□□□ -0.1
CSPG4P12-201ENST00000558282 TRAK2O60296 914 aa14.44□□□□□ -0.1
CSPG4P12-201ENST00000558282 TAOK2Q9UL54 1235 aa14.44□□□□□ -0.1
CSPG4P12-201ENST00000558282 AAMPQ13685 434 aa14.44□□□□□ -0.1
CSPG4P12-201ENST00000558282 AK7Q96M32 723 aa14.44□□□□□ -0.1
CSPG4P12-201ENST00000558282 CDR1P51861 262 aa14.44□□□□□ -0.1
CSPG4P12-201ENST00000558282 CFDP1Q9UEE9 299 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P12-201ENST00000558282 TSR1Q2NL82 804 aaKnown RBP14.43□□□□□ -0.1
CSPG4P12-201ENST00000558282 CHMP4AQ9BY43 222 aa14.43□□□□□ -0.1
CSPG4P12-201ENST00000558282 SMC4Q9NTJ3 1288 aa14.43□□□□□ -0.1
CSPG4P12-201ENST00000558282 HOMER1Q86YM7 354 aa14.43□□□□□ -0.1
CSPG4P12-201ENST00000558282 DCAF11Q8TEB1 546 aa14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 KCNH8Q96L42 1107 aa14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 PDCL3Q9H2J4 239 aa14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 MYBBP1AQ9BQG0 1328 aaKnown RBP14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 KIF15Q9NS87 1388 aa14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 ERCC4Q92889 916 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 IFT57Q9NWB7 429 aa14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 ATAD2BQ9ULI0 1458 aa14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 CRBNQ96SW2 442 aa14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 HDAC5Q9UQL6 1122 aa14.42□□□□□ -0.1
CSPG4P12-201ENST00000558282 USP8P40818 1118 aa14.41□□□□□ -0.1
CSPG4P12-201ENST00000558282 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
CSPG4P12-201ENST00000558282 PRKRIP1Q9H875 184 aaPredicted RBP14.41□□□□□ -0.1
CSPG4P12-201ENST00000558282 ESPNB1AK53 854 aa14.41□□□□□ -0.1
CSPG4P12-201ENST00000558282 RBM10P98175 930 aaKnown RBP14.41□□□□□ -0.1
CSPG4P12-201ENST00000558282 LEKR1Q6ZMV7 388 aa14.41□□□□□ -0.1
CSPG4P12-201ENST00000558282 PDCL2Q8N4E4 241 aa14.41□□□□□ -0.1
CSPG4P12-201ENST00000558282 H0YHG0 523 aa14.4□□□□□ -0.1
CSPG4P12-201ENST00000558282 HSP90B1P14625 803 aaKnown RBP14.4□□□□□ -0.1
CSPG4P12-201ENST00000558282 SF3A1Q15459 793 aaKnown RBP14.4□□□□□ -0.1
CSPG4P12-201ENST00000558282 NGEFQ8N5V2 710 aa14.4□□□□□ -0.1
CSPG4P12-201ENST00000558282 APBB1O00213 710 aa14.4□□□□□ -0.1
CSPG4P12-201ENST00000558282 CCDC191Q8NCU4 936 aa14.4□□□□□ -0.1
CSPG4P12-201ENST00000558282 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
CSPG4P12-201ENST00000558282 REC8O95072 547 aa14.39□□□□□ -0.11
CSPG4P12-201ENST00000558282 LETM1O95202 739 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P12-201ENST00000558282 MBD3O95983 291 aa14.39□□□□□ -0.11
CSPG4P12-201ENST00000558282 TULP1O00294 542 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P12-201ENST00000558282 RRP12Q5JTH9 1297 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-201ENST00000558282 TRIM6-TRIM34B2RNG4 842 aa14.38□□□□□ -0.11
CSPG4P12-201ENST00000558282 FRAT2O75474 233 aaPredicted RBP14.38□□□□□ -0.11
CSPG4P12-201ENST00000558282 EIF3AQ14152 1382 aaKnown RBP14.38□□□□□ -0.11
CSPG4P12-201ENST00000558282 RUFY1Q96T51 708 aa14.37□□□□□ -0.11
CSPG4P12-201ENST00000558282 FOXD4L5Q5VV16 416 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P12-201ENST00000558282 CAVIN1Q6NZI2 390 aaKnown RBP14.37□□□□□ -0.11
CSPG4P12-201ENST00000558282 FOXD4L4Q8WXT5 416 aaPredicted RBP14.37□□□□□ -0.11
CSPG4P12-201ENST00000558282 E9PSI1 815 aa14.37□□□□□ -0.11
CSPG4P12-201ENST00000558282 DCTN1Q14203 1278 aa14.37□□□□□ -0.11
CSPG4P12-201ENST00000558282 DEF6Q9H4E7 631 aa14.37□□□□□ -0.11
CSPG4P12-201ENST00000558282 PAK3O75914 559 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P12-201ENST00000558282 IPO7O95373 1038 aaKnown RBP14.36□□□□□ -0.11
CSPG4P12-201ENST00000558282 ZMYND15Q9H091 742 aa14.36□□□□□ -0.11
CSPG4P12-201ENST00000558282 ABCC8Q09428 1581 aa14.36□□□□□ -0.11
CSPG4P12-201ENST00000558282 UQCRHLA0A096LP55 91 aa14.36□□□□□ -0.11
CSPG4P12-201ENST00000558282 UQCRHP07919 91 aa14.36□□□□□ -0.11
CSPG4P12-201ENST00000558282 DHX8Q14562 1220 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 PDE4CQ08493 712 aa14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 CCP110O43303 1012 aa14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 C22orf23Q9BZE7 217 aa14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 GRPEL1Q9HAV7 217 aa14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 U2AF1L5P0DN76 240 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 U2AF1Q01081 240 aaKnown RBP eCLIP14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 NOL8Q76FK4 1167 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 CLUAP1Q96AJ1 413 aa14.35□□□□□ -0.11
CSPG4P12-201ENST00000558282 H3BQV1 296 aa14.34□□□□□ -0.11
CSPG4P12-201ENST00000558282 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
CSPG4P12-201ENST00000558282 MCTP1Q6DN14 999 aa14.34□□□□□ -0.11
CSPG4P12-201ENST00000558282 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
CSPG4P12-201ENST00000558282 SASS6Q6UVJ0 657 aa14.33□□□□□ -0.12
CSPG4P12-201ENST00000558282 CEP89Q96ST8 783 aa14.33□□□□□ -0.12
CSPG4P12-201ENST00000558282 ZKSCAN2Q63HK3 967 aa14.33□□□□□ -0.12
CSPG4P12-201ENST00000558282 POGKQ9P215 609 aa14.32□□□□□ -0.12
CSPG4P12-201ENST00000558282 TPD52L1Q16890 204 aaPredicted RBP14.32□□□□□ -0.12
CSPG4P12-201ENST00000558282 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
CSPG4P12-201ENST00000558282 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
CSPG4P12-201ENST00000558282 PATL2C9JE40 543 aaKnown RBP14.32□□□□□ -0.12
CSPG4P12-201ENST00000558282 ZSCAN30Q86W11 494 aa14.32□□□□□ -0.12
CSPG4P12-201ENST00000558282 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSPG4P12-201ENST00000558282 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
CSPG4P12-201ENST00000558282 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
CSPG4P12-201ENST00000558282 PLIN1O60240 522 aa14.3□□□□□ -0.12
CSPG4P12-201ENST00000558282 CALCOCO1Q9P1Z2 691 aa14.3□□□□□ -0.12
CSPG4P12-201ENST00000558282 ANKRD20A12PQ8NF67 263 aa14.3□□□□□ -0.12
CSPG4P12-201ENST00000558282 CUX2O14529 1486 aa14.3□□□□□ -0.12
CSPG4P12-201ENST00000558282 TSPY26PQ9H489 355 aa14.3□□□□□ -0.12
CSPG4P12-201ENST00000558282 SOGA1O94964 1423 aa14.3□□□□□ -0.12
CSPG4P12-201ENST00000558282 ANKRD45Q5TZF3 282 aa14.29□□□□□ -0.12
CSPG4P12-201ENST00000558282 C14orf37Q86TY3 774 aa14.29□□□□□ -0.12
CSPG4P12-201ENST00000558282 BACH2Q9BYV9 841 aa14.29□□□□□ -0.12
CSPG4P12-201ENST00000558282 DDX19BQ9UMR2 479 aa14.29□□□□□ -0.12
CSPG4P12-201ENST00000558282 CADPSQ9ULU8 1353 aa14.29□□□□□ -0.12
CSPG4P12-201ENST00000558282 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
CSPG4P12-201ENST00000558282 STK31Q9BXU1 1019 aa14.29□□□□□ -0.12
CSPG4P12-201ENST00000558282 CCDC112Q8NEF3 446 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms