RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 RANGAP1P46060 587 aaPredicted RBP13.81□□□□□ -0.2
SHC4-205ENST00000558220 FHOD3Q2V2M9 1422 aa13.8□□□□□ -0.2
SHC4-205ENST00000558220 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
SHC4-205ENST00000558220 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
SHC4-205ENST00000558220 ST18O60284 1047 aa13.78□□□□□ -0.2
SHC4-205ENST00000558220 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
SHC4-205ENST00000558220 CFAP74Q9C0B2 1584 aa13.78□□□□□ -0.2
SHC4-205ENST00000558220 RAPGEF3O95398 923 aa13.76□□□□□ -0.21
SHC4-205ENST00000558220 GSE1Q14687 1217 aa13.75□□□□□ -0.21
SHC4-205ENST00000558220 CDAN1Q8IWY9 1227 aa13.75□□□□□ -0.21
SHC4-205ENST00000558220 DENND4BO75064 1496 aaPredicted RBP13.74□□□□□ -0.21
SHC4-205ENST00000558220 ADAMTSL3P82987 1691 aa13.73□□□□□ -0.21
SHC4-205ENST00000558220 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
SHC4-205ENST00000558220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHC4-205ENST00000558220 FANCAO15360 1455 aa13.72□□□□□ -0.21
SHC4-205ENST00000558220 FMN1Q68DA7 1419 aa13.72□□□□□ -0.21
SHC4-205ENST00000558220 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
SHC4-205ENST00000558220 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.21
SHC4-205ENST00000558220 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
SHC4-205ENST00000558220 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
SHC4-205ENST00000558220 CDK11AQ9UQ88 783 aaPredicted RBP13.71□□□□□ -0.21
SHC4-205ENST00000558220 FRMPD1Q5SYB0 1578 aa13.71□□□□□ -0.22
SHC4-205ENST00000558220 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
SHC4-205ENST00000558220 PTPRMP28827 1452 aa13.69□□□□□ -0.22
SHC4-205ENST00000558220 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
SHC4-205ENST00000558220 HECW1Q76N89 1606 aa13.68□□□□□ -0.22
SHC4-205ENST00000558220 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
SHC4-205ENST00000558220 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
SHC4-205ENST00000558220 ARHGEF40Q8TER5 1519 aa13.68□□□□□ -0.22
SHC4-205ENST00000558220 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
SHC4-205ENST00000558220 TTC37Q6PGP7 1564 aa13.67□□□□□ -0.22
SHC4-205ENST00000558220 POGZQ7Z3K3 1410 aa13.67□□□□□ -0.22
SHC4-205ENST00000558220 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
SHC4-205ENST00000558220 ZMYM4Q5VZL5 1548 aa13.66□□□□□ -0.22
SHC4-205ENST00000558220 ATP1B4Q9UN42 357 aaPredicted RBP13.66□□□□□ -0.22
SHC4-205ENST00000558220 PLCH2O75038 1416 aa13.65□□□□□ -0.22
SHC4-205ENST00000558220 CDK13Q14004 1512 aaKnown RBP13.65□□□□□ -0.22
SHC4-205ENST00000558220 MYO5CQ9NQX4 1742 aa13.65□□□□□ -0.22
SHC4-205ENST00000558220 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
SHC4-205ENST00000558220 ARHGAP35Q9NRY4 1499 aa13.64□□□□□ -0.23
SHC4-205ENST00000558220 ZFYVE16Q7Z3T8 1539 aa13.64□□□□□ -0.23
SHC4-205ENST00000558220 MKRN3Q13064 507 aaKnown RBP13.63□□□□□ -0.23
SHC4-205ENST00000558220 EFCAB2Q5VUJ9 269 aa13.63□□□□□ -0.23
SHC4-205ENST00000558220 GOLGA2Q08379 1002 aa13.62□□□□□ -0.23
SHC4-205ENST00000558220 CLIP1P30622 1438 aa13.62□□□□□ -0.23
SHC4-205ENST00000558220 SCAPERQ9BY12 1400 aa13.62□□□□□ -0.23
SHC4-205ENST00000558220 RIMS1Q86UR5 1692 aaKnown RBP13.61□□□□□ -0.23
SHC4-205ENST00000558220 PSEN1P49768 467 aa13.61□□□□□ -0.23
SHC4-205ENST00000558220 TMEM121BQ9BXQ6 578 aaPredicted RBP13.61□□□□□ -0.23
SHC4-205ENST00000558220 KIF14Q15058 1648 aa13.61□□□□□ -0.23
SHC4-205ENST00000558220 SNPHO15079 494 aa13.6□□□□□ -0.23
SHC4-205ENST00000558220 PCF11O94913 1555 aaKnown RBP13.59□□□□□ -0.23
SHC4-205ENST00000558220 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
SHC4-205ENST00000558220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.24
SHC4-205ENST00000558220 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
SHC4-205ENST00000558220 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
SHC4-205ENST00000558220 ATP10AO60312 1499 aa13.56□□□□□ -0.24
SHC4-205ENST00000558220 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
SHC4-205ENST00000558220 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
SHC4-205ENST00000558220 L3MBTL3Q96JM7 780 aaPredicted RBP13.56□□□□□ -0.24
SHC4-205ENST00000558220 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
SHC4-205ENST00000558220 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
SHC4-205ENST00000558220 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
SHC4-205ENST00000558220 LRRIQ1Q96JM4 1722 aa13.55□□□□□ -0.24
SHC4-205ENST00000558220 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
SHC4-205ENST00000558220 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
SHC4-205ENST00000558220 MARVELD3Q96A59 401 aa13.54□□□□□ -0.24
SHC4-205ENST00000558220 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
SHC4-205ENST00000558220 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
SHC4-205ENST00000558220 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
SHC4-205ENST00000558220 CASKIN1Q8WXD9 1431 aa13.53□□□□□ -0.24
SHC4-205ENST00000558220 MLECQ14165 292 aa13.52□□□□□ -0.25
SHC4-205ENST00000558220 MYT1LQ9UL68 1186 aa13.52□□□□□ -0.25
SHC4-205ENST00000558220 SIGLEC1Q9BZZ2 1709 aa13.52□□□□□ -0.25
SHC4-205ENST00000558220 CDC42BPBQ9Y5S2 1711 aa13.52□□□□□ -0.25
SHC4-205ENST00000558220 SETD1BQ9UPS6 1966 aaKnown RBP13.51□□□□□ -0.25
SHC4-205ENST00000558220 KDM5CP41229 1560 aa13.51□□□□□ -0.25
SHC4-205ENST00000558220 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
SHC4-205ENST00000558220 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
SHC4-205ENST00000558220 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
SHC4-205ENST00000558220 AFAP1Q8N556 730 aa13.49□□□□□ -0.25
SHC4-205ENST00000558220 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
SHC4-205ENST00000558220 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
SHC4-205ENST00000558220 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
SHC4-205ENST00000558220 PREX1Q8TCU6 1659 aa13.47□□□□□ -0.25
SHC4-205ENST00000558220 DPY19L2Q6NUT2 758 aa13.47□□□□□ -0.25
SHC4-205ENST00000558220 CDC42BPAQ5VT25 1732 aa13.46□□□□□ -0.25
SHC4-205ENST00000558220 ITSN2Q9NZM3 1697 aa13.46□□□□□ -0.26
SHC4-205ENST00000558220 ABCC1P33527 1531 aa13.45□□□□□ -0.26
SHC4-205ENST00000558220 HSPA2P54652 639 aa13.45□□□□□ -0.26
SHC4-205ENST00000558220 ESF1Q9H501 851 aaKnown RBP13.45□□□□□ -0.26
SHC4-205ENST00000558220 CABP2Q9NPB3 220 aa13.45□□□□□ -0.26
SHC4-205ENST00000558220 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
SHC4-205ENST00000558220 SPNS2Q8IVW8 549 aa13.43□□□□□ -0.26
SHC4-205ENST00000558220 AGLP35573 1532 aa13.43□□□□□ -0.26
SHC4-205ENST00000558220 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
SHC4-205ENST00000558220 TRAPPC8Q9Y2L5 1435 aa13.41□□□□□ -0.26
SHC4-205ENST00000558220 EMP3P54852 163 aa13.41□□□□□ -0.26
SHC4-205ENST00000558220 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
SHC4-205ENST00000558220 KIDINS220Q9ULH0 1771 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms