RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 PHLDB1Q86UU1 1377 aa18.5■□□□□ 0.55
HMGB1P8-201ENST00000558211 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
HMGB1P8-201ENST00000558211 PHF12Q96QT6 1004 aa18.49■□□□□ 0.55
HMGB1P8-201ENST00000558211 KIF12Q96FN5 646 aa18.47■□□□□ 0.55
HMGB1P8-201ENST00000558211 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
HMGB1P8-201ENST00000558211 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
HMGB1P8-201ENST00000558211 ARAP3Q8WWN8 1544 aa18.46■□□□□ 0.55
HMGB1P8-201ENST00000558211 CFAP74Q9C0B2 1584 aa18.46■□□□□ 0.55
HMGB1P8-201ENST00000558211 ZNF644Q9H582 1327 aaPredicted RBP18.46■□□□□ 0.55
HMGB1P8-201ENST00000558211 NEO1Q92859 1461 aa18.46■□□□□ 0.54
HMGB1P8-201ENST00000558211 SLC24A1O60721 1099 aa18.45■□□□□ 0.54
HMGB1P8-201ENST00000558211 ADGRL1O94910 1474 aa18.42■□□□□ 0.54
HMGB1P8-201ENST00000558211 HNRNPMP52272 730 aaKnown RBP eCLIP18.42■□□□□ 0.54
HMGB1P8-201ENST00000558211 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
HMGB1P8-201ENST00000558211 KDM6BO15054 1643 aa18.41■□□□□ 0.54
HMGB1P8-201ENST00000558211 SCAPERQ9BY12 1400 aa18.41■□□□□ 0.54
HMGB1P8-201ENST00000558211 RAPGEF3O95398 923 aa18.4■□□□□ 0.54
HMGB1P8-201ENST00000558211 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
HMGB1P8-201ENST00000558211 MIA2Q96PC5 1412 aa18.4■□□□□ 0.54
HMGB1P8-201ENST00000558211 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.54
HMGB1P8-201ENST00000558211 MAP3K13O43283 966 aa18.39■□□□□ 0.53
HMGB1P8-201ENST00000558211 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.53
HMGB1P8-201ENST00000558211 RNF25Q96BH1 459 aaPredicted RBP18.39■□□□□ 0.53
HMGB1P8-201ENST00000558211 CAMSAP2Q08AD1 1489 aa18.39■□□□□ 0.53
HMGB1P8-201ENST00000558211 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
HMGB1P8-201ENST00000558211 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
HMGB1P8-201ENST00000558211 RGL2O15211 777 aa18.37■□□□□ 0.53
HMGB1P8-201ENST00000558211 SGIP1Q9BQI5 828 aa18.37■□□□□ 0.53
HMGB1P8-201ENST00000558211 ABCC1P33527 1531 aa18.37■□□□□ 0.53
HMGB1P8-201ENST00000558211 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
HMGB1P8-201ENST00000558211 AFAP1Q8N556 730 aa18.36■□□□□ 0.53
HMGB1P8-201ENST00000558211 ARHGEF12Q9NZN5 1544 aa18.36■□□□□ 0.53
HMGB1P8-201ENST00000558211 MYT1LQ9UL68 1186 aa18.36■□□□□ 0.53
HMGB1P8-201ENST00000558211 PLEKHH2Q8IVE3 1493 aa18.35■□□□□ 0.53
HMGB1P8-201ENST00000558211 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
HMGB1P8-201ENST00000558211 CLCN6P51797 869 aa18.33■□□□□ 0.52
HMGB1P8-201ENST00000558211 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
HMGB1P8-201ENST00000558211 RICTORQ6R327 1708 aa18.32■□□□□ 0.52
HMGB1P8-201ENST00000558211 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
HMGB1P8-201ENST00000558211 PCDHB13Q9Y5F0 798 aa18.31■□□□□ 0.52
HMGB1P8-201ENST00000558211 ITGAEP38570 1179 aa18.3■□□□□ 0.52
HMGB1P8-201ENST00000558211 TCOF1Q13428 1488 aaKnown RBP18.3■□□□□ 0.52
HMGB1P8-201ENST00000558211 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
HMGB1P8-201ENST00000558211 ZNF518AQ6AHZ1 1483 aa18.29■□□□□ 0.52
HMGB1P8-201ENST00000558211 MBD5Q9P267 1494 aa18.29■□□□□ 0.52
HMGB1P8-201ENST00000558211 IFNL1Q8IU54 200 aa18.29■□□□□ 0.52
HMGB1P8-201ENST00000558211 SP7Q8TDD2 431 aaPredicted RBP18.28■□□□□ 0.52
HMGB1P8-201ENST00000558211 MS4A3Q96HJ5 214 aa18.28■□□□□ 0.52
HMGB1P8-201ENST00000558211 RIOK3O14730 519 aaKnown RBP18.27■□□□□ 0.52
HMGB1P8-201ENST00000558211 TSPY4P0CV99 314 aa18.27■□□□□ 0.52
HMGB1P8-201ENST00000558211 TSPY10P0CW01 314 aa18.27■□□□□ 0.52
HMGB1P8-201ENST00000558211 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
HMGB1P8-201ENST00000558211 ZNF467Q7Z7K2 595 aaPredicted RBP18.27■□□□□ 0.52
HMGB1P8-201ENST00000558211 CCDC141Q6ZP82 1450 aa18.26■□□□□ 0.51
HMGB1P8-201ENST00000558211 SPAG9O60271 1321 aaKnown RBP18.26■□□□□ 0.51
HMGB1P8-201ENST00000558211 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
HMGB1P8-201ENST00000558211 PCDHB8Q9UN66 801 aa18.26■□□□□ 0.51
HMGB1P8-201ENST00000558211 GABBR2O75899 941 aa18.25■□□□□ 0.51
HMGB1P8-201ENST00000558211 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
HMGB1P8-201ENST00000558211 GALR2O43603 387 aaPredicted RBP18.24■□□□□ 0.51
HMGB1P8-201ENST00000558211 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
HMGB1P8-201ENST00000558211 ABCC5O15440 1437 aa18.23■□□□□ 0.51
HMGB1P8-201ENST00000558211 DAPK1P53355 1430 aa18.23■□□□□ 0.51
HMGB1P8-201ENST00000558211 KDM5CP41229 1560 aa18.22■□□□□ 0.51
HMGB1P8-201ENST00000558211 DNMT1P26358 1616 aaKnown RBP18.22■□□□□ 0.51
HMGB1P8-201ENST00000558211 HECW2Q9P2P5 1572 aa18.21■□□□□ 0.51
HMGB1P8-201ENST00000558211 ZMYM4Q5VZL5 1548 aa18.2■□□□□ 0.5
HMGB1P8-201ENST00000558211 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
HMGB1P8-201ENST00000558211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.5
HMGB1P8-201ENST00000558211 ZFYVE16Q7Z3T8 1539 aa18.19■□□□□ 0.5
HMGB1P8-201ENST00000558211 KIDINS220Q9ULH0 1771 aa18.19■□□□□ 0.5
HMGB1P8-201ENST00000558211 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
HMGB1P8-201ENST00000558211 CROCC2H7BZ55 1655 aa18.18■□□□□ 0.5
HMGB1P8-201ENST00000558211 ATP7AQ04656 1500 aa18.18■□□□□ 0.5
HMGB1P8-201ENST00000558211 C9orf84Q5VXU9 1444 aa18.18■□□□□ 0.5
HMGB1P8-201ENST00000558211 MAGI2Q86UL8 1455 aa18.17■□□□□ 0.5
HMGB1P8-201ENST00000558211 TRPC6Q9Y210 931 aa18.16■□□□□ 0.5
HMGB1P8-201ENST00000558211 INO80Q9ULG1 1556 aaPredicted RBP18.16■□□□□ 0.5
HMGB1P8-201ENST00000558211 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
HMGB1P8-201ENST00000558211 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
HMGB1P8-201ENST00000558211 RRP7BPQ9NSQ0 103 aa18.15■□□□□ 0.5
HMGB1P8-201ENST00000558211 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
HMGB1P8-201ENST00000558211 RTEL1-TNFRSF6BF6WH68 1400 aa18.15■□□□□ 0.5
HMGB1P8-201ENST00000558211 ARHGEF40Q8TER5 1519 aa18.13■□□□□ 0.49
HMGB1P8-201ENST00000558211 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
HMGB1P8-201ENST00000558211 MAST1Q9Y2H9 1570 aa18.13■□□□□ 0.49
HMGB1P8-201ENST00000558211 ATP10AO60312 1499 aa18.13■□□□□ 0.49
HMGB1P8-201ENST00000558211 SHANK2Q9UPX8 1470 aa18.13■□□□□ 0.49
HMGB1P8-201ENST00000558211 ARID4BQ4LE39 1312 aaPredicted RBP18.12■□□□□ 0.49
HMGB1P8-201ENST00000558211 PDAP1Q13442 181 aaKnown RBP18.11■□□□□ 0.49
HMGB1P8-201ENST00000558211 ANKRD30AQ9BXX3 1397 aa18.11■□□□□ 0.49
HMGB1P8-201ENST00000558211 ADGBQ8N7X0 1667 aa18.1■□□□□ 0.49
HMGB1P8-201ENST00000558211 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
HMGB1P8-201ENST00000558211 A2MP01023 1474 aa18.08■□□□□ 0.49
HMGB1P8-201ENST00000558211 KIF15Q9NS87 1388 aa18.08■□□□□ 0.49
HMGB1P8-201ENST00000558211 PSEN1P49768 467 aa18.08■□□□□ 0.48
HMGB1P8-201ENST00000558211 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
HMGB1P8-201ENST00000558211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.07■□□□□ 0.48
HMGB1P8-201ENST00000558211 MLECQ14165 292 aa18.07■□□□□ 0.48
HMGB1P8-201ENST00000558211 ZFP91Q96JP5 570 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms