RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 PPP6R1Q9UPN7 881 aa26.1■■□□□ 1.77
RPL28-205ENST00000558131 EIF2AK4Q9P2K8 1649 aaKnown RBP26.08■■□□□ 1.77
RPL28-205ENST00000558131 KANK4Q5T7N3 995 aaPredicted RBP26.08■■□□□ 1.77
RPL28-205ENST00000558131 PZPP20742 1482 aa26.08■■□□□ 1.77
RPL28-205ENST00000558131 CROCC2H7BZ55 1655 aa26.08■■□□□ 1.77
RPL28-205ENST00000558131 MROH1Q8NDA8 1641 aa26.07■■□□□ 1.76
RPL28-205ENST00000558131 POLR1AO95602 1720 aaPredicted RBP26.07■■□□□ 1.76
RPL28-205ENST00000558131 A2ML1A8K2U0 1454 aa26.06■■□□□ 1.76
RPL28-205ENST00000558131 ZC3H13Q5T200 1668 aaKnown RBP26.06■■□□□ 1.76
RPL28-205ENST00000558131 MYOM3Q5VTT5 1437 aa26.05■■□□□ 1.76
RPL28-205ENST00000558131 RSPH4AQ5TD94 716 aa26.05■■□□□ 1.76
RPL28-205ENST00000558131 MIA2Q96PC5 1412 aa26.04■■□□□ 1.76
RPL28-205ENST00000558131 IQSEC2Q5JU85 1478 aa26.04■■□□□ 1.76
RPL28-205ENST00000558131 NEURL4Q96JN8 1562 aa26.03■■□□□ 1.76
RPL28-205ENST00000558131 KIF3BO15066 747 aa26.02■■□□□ 1.76
RPL28-205ENST00000558131 NCKAP5LQ9HCH0 1330 aa26■■□□□ 1.75
RPL28-205ENST00000558131 ABCC3O15438 1527 aa25.99■■□□□ 1.75
RPL28-205ENST00000558131 CEP152O94986 1710 aa25.99■■□□□ 1.75
RPL28-205ENST00000558131 PTPN23Q9H3S7 1636 aa25.96■■□□□ 1.75
RPL28-205ENST00000558131 TNRQ92752 1358 aa25.95■■□□□ 1.75
RPL28-205ENST00000558131 FBXO31Q5XUX0 539 aaPredicted RBP25.95■■□□□ 1.74
RPL28-205ENST00000558131 SPATA31D1Q6ZQQ2 1576 aa25.95■■□□□ 1.74
RPL28-205ENST00000558131 SHANK2Q9UPX8 1470 aa25.93■■□□□ 1.74
RPL28-205ENST00000558131 PKD2Q13563 968 aa25.93■■□□□ 1.74
RPL28-205ENST00000558131 ZNF335Q9H4Z2 1342 aaPredicted RBP25.92■■□□□ 1.74
RPL28-205ENST00000558131 TSPY4P0CV99 314 aa25.92■■□□□ 1.74
RPL28-205ENST00000558131 TSPY10P0CW01 314 aa25.92■■□□□ 1.74
RPL28-205ENST00000558131 DUOX2Q9NRD8 1548 aa25.92■■□□□ 1.74
RPL28-205ENST00000558131 PRDM15P57071 1507 aaPredicted RBP25.91■■□□□ 1.74
RPL28-205ENST00000558131 NLRP1Q9C000 1473 aa25.91■■□□□ 1.74
RPL28-205ENST00000558131 WASHC2CQ9Y4E1 1318 aa25.9■■□□□ 1.74
RPL28-205ENST00000558131 DEPDC5O75140 1603 aa25.9■■□□□ 1.74
RPL28-205ENST00000558131 ABCC5O15440 1437 aa25.88■■□□□ 1.73
RPL28-205ENST00000558131 UGGT1Q9NYU2 1555 aa25.87■■□□□ 1.73
RPL28-205ENST00000558131 ERVK-7P63135 1459 aa25.86■■□□□ 1.73
RPL28-205ENST00000558131 UBR1Q8IWV7 1749 aa25.84■■□□□ 1.73
RPL28-205ENST00000558131 VWDEQ8N2E2 1590 aa25.83■■□□□ 1.73
RPL28-205ENST00000558131 FGD6Q6ZV73 1430 aa25.83■■□□□ 1.73
RPL28-205ENST00000558131 DAPK1P53355 1430 aa25.82■■□□□ 1.72
RPL28-205ENST00000558131 ERBINQ96RT1 1412 aa25.81■■□□□ 1.72
RPL28-205ENST00000558131 IQGAP1P46940 1657 aa25.81■■□□□ 1.72
RPL28-205ENST00000558131 MED14O60244 1454 aa25.81■■□□□ 1.72
RPL28-205ENST00000558131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.81■■□□□ 1.72
RPL28-205ENST00000558131 CFAP65Q6ZU64 1925 aaKnown RBP25.8■■□□□ 1.72
RPL28-205ENST00000558131 KIF15Q9NS87 1388 aa25.8■■□□□ 1.72
RPL28-205ENST00000558131 STRCP1A6NGW2 1772 aa25.77■■□□□ 1.72
RPL28-205ENST00000558131 CPS1P31327 1500 aa25.75■■□□□ 1.71
RPL28-205ENST00000558131 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
RPL28-205ENST00000558131 NPHP4O75161 1426 aaPredicted RBP25.72■■□□□ 1.71
RPL28-205ENST00000558131 ALKQ9UM73 1620 aa25.71■■□□□ 1.71
RPL28-205ENST00000558131 PIK3C2BO00750 1634 aa25.7■■□□□ 1.71
RPL28-205ENST00000558131 LMTK2Q8IWU2 1503 aa25.7■■□□□ 1.7
RPL28-205ENST00000558131 ADGRL2O95490 1459 aa25.69■■□□□ 1.7
RPL28-205ENST00000558131 THEMISQ8N1K5 641 aaPredicted RBP25.69■■□□□ 1.7
RPL28-205ENST00000558131 ARHGAP23Q9P227 1491 aa25.68■■□□□ 1.7
RPL28-205ENST00000558131 SLIT1O75093 1534 aa25.68■■□□□ 1.7
RPL28-205ENST00000558131 ANKLE2Q86XL3 938 aa25.67■■□□□ 1.7
RPL28-205ENST00000558131 RRP7BPQ9NSQ0 103 aa25.67■■□□□ 1.7
RPL28-205ENST00000558131 KDM5AP29375 1690 aaKnown RBP25.67■■□□□ 1.7
RPL28-205ENST00000558131 SYNMO15061 1565 aa25.65■■□□□ 1.7
RPL28-205ENST00000558131 APLP2Q06481 763 aa25.65■■□□□ 1.7
RPL28-205ENST00000558131 EFCAB6Q5THR3 1501 aa25.64■■□□□ 1.7
RPL28-205ENST00000558131 UBAP1LF5GYI3 381 aa25.63■■□□□ 1.69
RPL28-205ENST00000558131 ANKRD30AQ9BXX3 1397 aa25.61■■□□□ 1.69
RPL28-205ENST00000558131 DISP3Q9P2K9 1392 aa25.61■■□□□ 1.69
RPL28-205ENST00000558131 SCAF11Q99590 1463 aaKnown RBP25.6■■□□□ 1.69
RPL28-205ENST00000558131 XIRP1Q702N8 1843 aaKnown RBP25.59■■□□□ 1.69
RPL28-205ENST00000558131 ILDR2Q71H61 639 aa25.57■■□□□ 1.68
RPL28-205ENST00000558131 CHIC2Q9UKJ5 165 aa25.57■■□□□ 1.68
RPL28-205ENST00000558131 LRRC7Q96NW7 1537 aa25.57■■□□□ 1.68
RPL28-205ENST00000558131 NOS1P29475 1434 aa25.54■■□□□ 1.68
RPL28-205ENST00000558131 UNC13BO14795 1591 aa25.54■■□□□ 1.68
RPL28-205ENST00000558131 KANK1Q14678 1352 aa25.53■■□□□ 1.68
RPL28-205ENST00000558131 ADGRB3O60242 1522 aa25.53■■□□□ 1.68
RPL28-205ENST00000558131 TET3O43151 1660 aa25.52■■□□□ 1.68
RPL28-205ENST00000558131 LTKP29376 864 aa25.52■■□□□ 1.68
RPL28-205ENST00000558131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.52■■□□□ 1.68
RPL28-205ENST00000558131 GCC2Q8IWJ2 1684 aa25.51■■□□□ 1.67
RPL28-205ENST00000558131 MYO5BQ9ULV0 1848 aa25.5■■□□□ 1.67
RPL28-205ENST00000558131 ANKRD50Q9ULJ7 1429 aa25.48■■□□□ 1.67
RPL28-205ENST00000558131 TMEM2Q9UHN6 1383 aa25.48■■□□□ 1.67
RPL28-205ENST00000558131 RPRD2Q5VT52 1461 aaKnown RBP25.46■■□□□ 1.67
RPL28-205ENST00000558131 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
RPL28-205ENST00000558131 E9PCH4 1651 aa25.44■■□□□ 1.66
RPL28-205ENST00000558131 FAM50AQ14320 339 aaKnown RBP25.43■■□□□ 1.66
RPL28-205ENST00000558131 IQGAP3Q86VI3 1631 aa25.42■■□□□ 1.66
RPL28-205ENST00000558131 TOM1O60784 492 aa25.42■■□□□ 1.66
RPL28-205ENST00000558131 HSPA1LP34931 641 aa25.42■■□□□ 1.66
RPL28-205ENST00000558131 IDI1Q13907 227 aa25.42■■□□□ 1.66
RPL28-205ENST00000558131 TXNDC2Q86VQ3 553 aa25.42■■□□□ 1.66
RPL28-205ENST00000558131 PIP4K2BP78356 416 aa25.41■■□□□ 1.66
RPL28-205ENST00000558131 TMEM131LA2VDJ0 1609 aa25.41■■□□□ 1.66
RPL28-205ENST00000558131 NWD1Q149M9 1564 aa25.4■■□□□ 1.66
RPL28-205ENST00000558131 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
RPL28-205ENST00000558131 ZFYVE9O95405 1425 aa25.37■■□□□ 1.65
RPL28-205ENST00000558131 ROCK1Q13464 1354 aa25.36■■□□□ 1.65
RPL28-205ENST00000558131 EID1Q9Y6B2 187 aa25.33■■□□□ 1.65
RPL28-205ENST00000558131 SOCS7O14512 581 aa25.32■■□□□ 1.64
RPL28-205ENST00000558131 CHD2O14647 1828 aaKnown RBP25.3■■□□□ 1.64
RPL28-205ENST00000558131 SLC52A1Q9NWF4 448 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms