RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
TRPM1-204ENST00000557948 ARHGAP5Q13017 1502 aa9.95□□□□□ -0.82
TRPM1-204ENST00000557948 NPHP4O75161 1426 aaPredicted RBP9.93□□□□□ -0.82
TRPM1-204ENST00000557948 ZNF772Q68DY9 489 aaPredicted RBP9.93□□□□□ -0.82
TRPM1-204ENST00000557948 KIDINS220Q9ULH0 1771 aa9.93□□□□□ -0.82
TRPM1-204ENST00000557948 IQGAP1P46940 1657 aa9.93□□□□□ -0.82
TRPM1-204ENST00000557948 FAM135BQ49AJ0 1406 aa9.92□□□□□ -0.82
TRPM1-204ENST00000557948 ZNF219Q9P2Y4 722 aaPredicted RBP9.92□□□□□ -0.82
TRPM1-204ENST00000557948 ZRANB1Q9UGI0 708 aa9.92□□□□□ -0.82
TRPM1-204ENST00000557948 ITSN2Q9NZM3 1697 aa9.92□□□□□ -0.82
TRPM1-204ENST00000557948 DEPDC5O75140 1603 aa9.91□□□□□ -0.82
TRPM1-204ENST00000557948 MED14O60244 1454 aa9.91□□□□□ -0.82
TRPM1-204ENST00000557948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRPM1-204ENST00000557948 RXRBP28702 533 aa9.9□□□□□ -0.82
TRPM1-204ENST00000557948 CDK13Q14004 1512 aaKnown RBP9.9□□□□□ -0.82
TRPM1-204ENST00000557948 ROBO1Q9Y6N7 1651 aa9.9□□□□□ -0.83
TRPM1-204ENST00000557948 ABCC1P33527 1531 aa9.89□□□□□ -0.83
TRPM1-204ENST00000557948 MEX3CQ5U5Q3 659 aaKnown RBP9.89□□□□□ -0.83
TRPM1-204ENST00000557948 RBM33Q96EV2 1170 aaKnown RBP9.89□□□□□ -0.83
TRPM1-204ENST00000557948 XIRP1Q702N8 1843 aaKnown RBP9.89□□□□□ -0.83
TRPM1-204ENST00000557948 PRXQ9BXM0 1461 aa9.88□□□□□ -0.83
TRPM1-204ENST00000557948 CDK12Q9NYV4 1490 aaPredicted RBP9.88□□□□□ -0.83
TRPM1-204ENST00000557948 THEMISQ8N1K5 641 aaPredicted RBP9.88□□□□□ -0.83
TRPM1-204ENST00000557948 KIF14Q15058 1648 aa9.88□□□□□ -0.83
TRPM1-204ENST00000557948 SETBP1Q9Y6X0 1596 aa9.88□□□□□ -0.83
TRPM1-204ENST00000557948 JCADQ9P266 1359 aa9.88□□□□□ -0.83
TRPM1-204ENST00000557948 GGT6Q6P531 493 aa9.87□□□□□ -0.83
TRPM1-204ENST00000557948 PHLPP1O60346 1717 aa9.87□□□□□ -0.83
TRPM1-204ENST00000557948 TNRQ92752 1358 aa9.87□□□□□ -0.83
TRPM1-204ENST00000557948 RANGAP1P46060 587 aaPredicted RBP9.86□□□□□ -0.83
TRPM1-204ENST00000557948 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
TRPM1-204ENST00000557948 CDC42BPBQ9Y5S2 1711 aa9.86□□□□□ -0.83
TRPM1-204ENST00000557948 AMER1Q5JTC6 1135 aaPredicted RBP9.85□□□□□ -0.83
TRPM1-204ENST00000557948 FAM135AQ9P2D6 1515 aa9.85□□□□□ -0.83
TRPM1-204ENST00000557948 CDK11AQ9UQ88 783 aaPredicted RBP9.84□□□□□ -0.83
TRPM1-204ENST00000557948 UGGT1Q9NYU2 1555 aa9.84□□□□□ -0.83
TRPM1-204ENST00000557948 NUTM2BA6NNL0 878 aaPredicted RBP9.83□□□□□ -0.84
TRPM1-204ENST00000557948 NUTM2EB1AL46 878 aaPredicted RBP9.83□□□□□ -0.84
TRPM1-204ENST00000557948 APLP2Q06481 763 aa9.83□□□□□ -0.84
TRPM1-204ENST00000557948 NUTM2DQ5VT03 806 aaPredicted RBP9.83□□□□□ -0.84
TRPM1-204ENST00000557948 NUTM2AQ8IVF1 878 aaPredicted RBP9.83□□□□□ -0.84
TRPM1-204ENST00000557948 LRP6O75581 1613 aa9.82□□□□□ -0.84
TRPM1-204ENST00000557948 KDM5DQ9BY66 1539 aa9.82□□□□□ -0.84
TRPM1-204ENST00000557948 SPATA31A6Q5VVP1 1343 aa9.82□□□□□ -0.84
TRPM1-204ENST00000557948 ZC3H13Q5T200 1668 aaKnown RBP9.81□□□□□ -0.84
TRPM1-204ENST00000557948 PLXNC1O60486 1568 aa9.81□□□□□ -0.84
TRPM1-204ENST00000557948 SAMD9LQ8IVG5 1584 aa9.81□□□□□ -0.84
TRPM1-204ENST00000557948 LRRC9Q6ZRR7 1453 aa9.81□□□□□ -0.84
TRPM1-204ENST00000557948 FBXO31Q5XUX0 539 aaPredicted RBP9.81□□□□□ -0.84
TRPM1-204ENST00000557948 SPINK5Q9NQ38 1064 aaPredicted RBP9.81□□□□□ -0.84
TRPM1-204ENST00000557948 SPAG9O60271 1321 aaKnown RBP9.81□□□□□ -0.84
TRPM1-204ENST00000557948 A2MP01023 1474 aa9.8□□□□□ -0.84
TRPM1-204ENST00000557948 NLRP1Q9C000 1473 aa9.8□□□□□ -0.84
TRPM1-204ENST00000557948 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-204ENST00000557948 PREX2Q70Z35 1606 aa9.8□□□□□ -0.84
TRPM1-204ENST00000557948 CLIP1P30622 1438 aa9.8□□□□□ -0.84
TRPM1-204ENST00000557948 RGS12O14924 1447 aa9.79□□□□□ -0.84
TRPM1-204ENST00000557948 ATP7AQ04656 1500 aa9.78□□□□□ -0.84
TRPM1-204ENST00000557948 TROQ12816 1431 aaPredicted RBP9.78□□□□□ -0.84
TRPM1-204ENST00000557948 PZPP20742 1482 aa9.78□□□□□ -0.84
TRPM1-204ENST00000557948 ATAD2Q6PL18 1390 aa9.77□□□□□ -0.84
TRPM1-204ENST00000557948 LRP5O75197 1615 aa9.77□□□□□ -0.85
TRPM1-204ENST00000557948 COL16A1Q07092 1604 aaPredicted RBP9.77□□□□□ -0.85
TRPM1-204ENST00000557948 TMEM94Q12767 1356 aa9.76□□□□□ -0.85
TRPM1-204ENST00000557948 FGD6Q6ZV73 1430 aa9.76□□□□□ -0.85
TRPM1-204ENST00000557948 MIA2Q96PC5 1412 aa9.76□□□□□ -0.85
TRPM1-204ENST00000557948 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
TRPM1-204ENST00000557948 RNF39Q9H2S5 420 aa9.76□□□□□ -0.85
TRPM1-204ENST00000557948 SHPRHQ149N8 1683 aa9.75□□□□□ -0.85
TRPM1-204ENST00000557948 ADGBQ8N7X0 1667 aa9.75□□□□□ -0.85
TRPM1-204ENST00000557948 RBM6P78332 1123 aaKnown RBP9.75□□□□□ -0.85
TRPM1-204ENST00000557948 AFF2P51816 1311 aa9.75□□□□□ -0.85
TRPM1-204ENST00000557948 INO80Q9ULG1 1556 aaPredicted RBP9.74□□□□□ -0.85
TRPM1-204ENST00000557948 SCAF11Q99590 1463 aaKnown RBP9.73□□□□□ -0.85
TRPM1-204ENST00000557948 SYCP2Q9BX26 1530 aa9.73□□□□□ -0.85
TRPM1-204ENST00000557948 SLAIN2Q9P270 581 aa9.73□□□□□ -0.85
TRPM1-204ENST00000557948 ZNF777Q9ULD5 760 aaPredicted RBP9.73□□□□□ -0.85
TRPM1-204ENST00000557948 CDC42BPAQ5VT25 1732 aa9.73□□□□□ -0.85
TRPM1-204ENST00000557948 MAP3K1Q13233 1512 aa9.72□□□□□ -0.85
TRPM1-204ENST00000557948 YY1P25490 414 aa9.72□□□□□ -0.85
TRPM1-204ENST00000557948 PROSER2Q86WR7 435 aaPredicted RBP9.72□□□□□ -0.85
TRPM1-204ENST00000557948 QTRT2Q9H974 415 aaKnown RBP9.72□□□□□ -0.85
TRPM1-204ENST00000557948 CAPN15O75808 1086 aa9.71□□□□□ -0.86
TRPM1-204ENST00000557948 HNRNPMP52272 730 aaKnown RBP eCLIP9.71□□□□□ -0.86
TRPM1-204ENST00000557948 NGLY1Q96IV0 654 aa9.71□□□□□ -0.86
TRPM1-204ENST00000557948 MSH6P52701 1360 aa9.71□□□□□ -0.86
TRPM1-204ENST00000557948 POLA2Q14181 598 aa9.7□□□□□ -0.86
TRPM1-204ENST00000557948 CCDC125Q86Z20 511 aa9.7□□□□□ -0.86
TRPM1-204ENST00000557948 WASHC2CQ9Y4E1 1318 aa9.7□□□□□ -0.86
TRPM1-204ENST00000557948 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
TRPM1-204ENST00000557948 TIAM1Q13009 1591 aa9.69□□□□□ -0.86
TRPM1-204ENST00000557948 TXNDC2Q86VQ3 553 aa9.69□□□□□ -0.86
TRPM1-204ENST00000557948 EP400Q96L91 3159 aa9.69□□□□□ -0.86
TRPM1-204ENST00000557948 UBR1Q8IWV7 1749 aa9.68□□□□□ -0.86
TRPM1-204ENST00000557948 FMN1Q68DA7 1419 aa9.67□□□□□ -0.86
TRPM1-204ENST00000557948 KCNA6P17658 529 aa9.67□□□□□ -0.86
TRPM1-204ENST00000557948 LTKP29376 864 aa9.67□□□□□ -0.86
TRPM1-204ENST00000557948 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
TRPM1-204ENST00000557948 PRDM15P57071 1507 aaPredicted RBP9.66□□□□□ -0.86
TRPM1-204ENST00000557948 KIF3BO15066 747 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms