RNA–Protein interactions for RNA: ENST00000557856.5

NTRK3-208, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NTRK3, Length 2,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-208ENST00000557856 RPRD2Q5VT52 1461 aaKnown RBP13.31□□□□□ -0.28
NTRK3-208ENST00000557856 CCDC141Q6ZP82 1450 aa13.31□□□□□ -0.28
NTRK3-208ENST00000557856 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
NTRK3-208ENST00000557856 ARHGAP5Q13017 1502 aa13.3□□□□□ -0.28
NTRK3-208ENST00000557856 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
NTRK3-208ENST00000557856 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
NTRK3-208ENST00000557856 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
NTRK3-208ENST00000557856 NEFMP07197 916 aa13.28□□□□□ -0.28
NTRK3-208ENST00000557856 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
NTRK3-208ENST00000557856 CNTLNQ9NXG0 1405 aa13.28□□□□□ -0.28
NTRK3-208ENST00000557856 L3MBTL2Q969R5 705 aa13.27□□□□□ -0.28
NTRK3-208ENST00000557856 KIAA1107Q9UPP5 1409 aa13.27□□□□□ -0.28
NTRK3-208ENST00000557856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
NTRK3-208ENST00000557856 USP35Q9P2H5 1018 aa13.27□□□□□ -0.29
NTRK3-208ENST00000557856 PLEKHH2Q8IVE3 1493 aa13.27□□□□□ -0.29
NTRK3-208ENST00000557856 EIF4G2P78344 907 aaKnown RBP eCLIP13.26□□□□□ -0.29
NTRK3-208ENST00000557856 SYCP2Q9BX26 1530 aa13.26□□□□□ -0.29
NTRK3-208ENST00000557856 EFCAB2Q5VUJ9 269 aa13.26□□□□□ -0.29
NTRK3-208ENST00000557856 ASXL2Q76L83 1435 aa13.26□□□□□ -0.29
NTRK3-208ENST00000557856 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
NTRK3-208ENST00000557856 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
NTRK3-208ENST00000557856 TEX14Q8IWB6 1497 aa13.25□□□□□ -0.29
NTRK3-208ENST00000557856 KDM5DQ9BY66 1539 aa13.25□□□□□ -0.29
NTRK3-208ENST00000557856 MAST1Q9Y2H9 1570 aa13.24□□□□□ -0.29
NTRK3-208ENST00000557856 NUP155O75694 1391 aa13.24□□□□□ -0.29
NTRK3-208ENST00000557856 PLCH2O75038 1416 aa13.24□□□□□ -0.29
NTRK3-208ENST00000557856 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
NTRK3-208ENST00000557856 PKD2Q13563 968 aa13.24□□□□□ -0.29
NTRK3-208ENST00000557856 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
NTRK3-208ENST00000557856 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
NTRK3-208ENST00000557856 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
NTRK3-208ENST00000557856 NUDCQ9Y266 331 aa13.22□□□□□ -0.29
NTRK3-208ENST00000557856 TRAPPC8Q9Y2L5 1435 aa13.2□□□□□ -0.3
NTRK3-208ENST00000557856 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
NTRK3-208ENST00000557856 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
NTRK3-208ENST00000557856 CCDC7Q96M83 1385 aa13.19□□□□□ -0.3
NTRK3-208ENST00000557856 ARAP3Q8WWN8 1544 aa13.19□□□□□ -0.3
NTRK3-208ENST00000557856 NBPF8Q3BBV2 869 aa13.17□□□□□ -0.3
NTRK3-208ENST00000557856 ABCC1P33527 1531 aa13.17□□□□□ -0.3
NTRK3-208ENST00000557856 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
NTRK3-208ENST00000557856 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
NTRK3-208ENST00000557856 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
NTRK3-208ENST00000557856 FAM135AQ9P2D6 1515 aa13.16□□□□□ -0.3
NTRK3-208ENST00000557856 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
NTRK3-208ENST00000557856 PDE4AP27815 886 aa13.16□□□□□ -0.3
NTRK3-208ENST00000557856 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
NTRK3-208ENST00000557856 UNC13BO14795 1591 aa13.15□□□□□ -0.3
NTRK3-208ENST00000557856 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
NTRK3-208ENST00000557856 FANCAO15360 1455 aa13.15□□□□□ -0.3
NTRK3-208ENST00000557856 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
NTRK3-208ENST00000557856 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
NTRK3-208ENST00000557856 GSE1Q14687 1217 aa13.14□□□□□ -0.31
NTRK3-208ENST00000557856 ZNF326Q5BKZ1 582 aaKnown RBP13.14□□□□□ -0.31
NTRK3-208ENST00000557856 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
NTRK3-208ENST00000557856 ERBINQ96RT1 1412 aa13.13□□□□□ -0.31
NTRK3-208ENST00000557856 FAM69CQ0P6D2 419 aa13.12□□□□□ -0.31
NTRK3-208ENST00000557856 BACH2Q9BYV9 841 aa13.12□□□□□ -0.31
NTRK3-208ENST00000557856 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
NTRK3-208ENST00000557856 ABCA9Q8IUA7 1624 aa13.12□□□□□ -0.31
NTRK3-208ENST00000557856 SPATA31E1Q6ZUB1 1445 aa13.12□□□□□ -0.31
NTRK3-208ENST00000557856 SENP3-EIF4A1A0A087X0R7 540 aa13.11□□□□□ -0.31
NTRK3-208ENST00000557856 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
NTRK3-208ENST00000557856 RTEL1-TNFRSF6BF6WH68 1400 aa13.1□□□□□ -0.31
NTRK3-208ENST00000557856 IQGAP3Q86VI3 1631 aa13.1□□□□□ -0.31
NTRK3-208ENST00000557856 KIF7Q2M1P5 1343 aa13.1□□□□□ -0.31
NTRK3-208ENST00000557856 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
NTRK3-208ENST00000557856 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
NTRK3-208ENST00000557856 UHRF1BP1Q6BDS2 1440 aa13.1□□□□□ -0.31
NTRK3-208ENST00000557856 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
NTRK3-208ENST00000557856 ZMYND15Q9H091 742 aa13.09□□□□□ -0.31
NTRK3-208ENST00000557856 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
NTRK3-208ENST00000557856 KIF3BO15066 747 aa13.09□□□□□ -0.31
NTRK3-208ENST00000557856 MS4A1P11836 297 aa13.09□□□□□ -0.31
NTRK3-208ENST00000557856 RGL3Q3MIN7 710 aa13.09□□□□□ -0.31
NTRK3-208ENST00000557856 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.32
NTRK3-208ENST00000557856 ZFYVE16Q7Z3T8 1539 aa13.07□□□□□ -0.32
NTRK3-208ENST00000557856 FRAT1Q92837 279 aaPredicted RBP13.07□□□□□ -0.32
NTRK3-208ENST00000557856 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
NTRK3-208ENST00000557856 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
NTRK3-208ENST00000557856 DDRGK1Q96HY6 314 aa13.07□□□□□ -0.32
NTRK3-208ENST00000557856 FAM43AQ8N2R8 423 aa13.06□□□□□ -0.32
NTRK3-208ENST00000557856 RALGAPBQ86X10 1494 aa13.06□□□□□ -0.32
NTRK3-208ENST00000557856 RRP1P56182 461 aaKnown RBP13.05□□□□□ -0.32
NTRK3-208ENST00000557856 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
NTRK3-208ENST00000557856 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
NTRK3-208ENST00000557856 PLA2R1Q13018 1463 aa13.05□□□□□ -0.32
NTRK3-208ENST00000557856 GLIPR1L2Q4G1C9 344 aa13.05□□□□□ -0.32
NTRK3-208ENST00000557856 USP47Q96K76 1375 aa13.04□□□□□ -0.32
NTRK3-208ENST00000557856 ATP10AO60312 1499 aa13.04□□□□□ -0.32
NTRK3-208ENST00000557856 GGT6Q6P531 493 aa13.04□□□□□ -0.32
NTRK3-208ENST00000557856 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
NTRK3-208ENST00000557856 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
NTRK3-208ENST00000557856 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
NTRK3-208ENST00000557856 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
NTRK3-208ENST00000557856 DCAF11Q8TEB1 546 aa13.03□□□□□ -0.32
NTRK3-208ENST00000557856 KDM5CP41229 1560 aa13.02□□□□□ -0.32
NTRK3-208ENST00000557856 TMC1Q8TDI8 760 aa13.02□□□□□ -0.33
NTRK3-208ENST00000557856 DHX29Q7Z478 1369 aaKnown RBP13.02□□□□□ -0.33
NTRK3-208ENST00000557856 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
NTRK3-208ENST00000557856 SLC4A3P48751 1232 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms