RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
CPNE6-204ENST00000557829 NEO1Q92859 1461 aa18.25■□□□□ 0.51
CPNE6-204ENST00000557829 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
CPNE6-204ENST00000557829 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
CPNE6-204ENST00000557829 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
CPNE6-204ENST00000557829 ZFYVE16Q7Z3T8 1539 aa18.24■□□□□ 0.51
CPNE6-204ENST00000557829 RTEL1-TNFRSF6BF6WH68 1400 aa18.23■□□□□ 0.51
CPNE6-204ENST00000557829 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
CPNE6-204ENST00000557829 POGZQ7Z3K3 1410 aa18.22■□□□□ 0.51
CPNE6-204ENST00000557829 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
CPNE6-204ENST00000557829 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
CPNE6-204ENST00000557829 PZPP20742 1482 aa18.22■□□□□ 0.51
CPNE6-204ENST00000557829 ZNF518AQ6AHZ1 1483 aa18.21■□□□□ 0.51
CPNE6-204ENST00000557829 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
CPNE6-204ENST00000557829 RAPGEF3O95398 923 aa18.2■□□□□ 0.5
CPNE6-204ENST00000557829 INO80Q9ULG1 1556 aaPredicted RBP18.2■□□□□ 0.5
CPNE6-204ENST00000557829 CCDC7Q96M83 1385 aa18.2■□□□□ 0.5
CPNE6-204ENST00000557829 ATP7AQ04656 1500 aa18.2■□□□□ 0.5
CPNE6-204ENST00000557829 DUOX2Q9NRD8 1548 aa18.18■□□□□ 0.5
CPNE6-204ENST00000557829 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
CPNE6-204ENST00000557829 FOXD1Q16676 465 aa18.17■□□□□ 0.5
CPNE6-204ENST00000557829 KDM5CP41229 1560 aa18.17■□□□□ 0.5
CPNE6-204ENST00000557829 FRMPD1Q5SYB0 1578 aa18.16■□□□□ 0.5
CPNE6-204ENST00000557829 NUP155O75694 1391 aa18.16■□□□□ 0.5
CPNE6-204ENST00000557829 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
CPNE6-204ENST00000557829 SPATA31E1Q6ZUB1 1445 aa18.15■□□□□ 0.5
CPNE6-204ENST00000557829 KDM5DQ9BY66 1539 aa18.15■□□□□ 0.5
CPNE6-204ENST00000557829 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
CPNE6-204ENST00000557829 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.49
CPNE6-204ENST00000557829 KIDINS220Q9ULH0 1771 aa18.14■□□□□ 0.49
CPNE6-204ENST00000557829 UNC13BO14795 1591 aa18.13■□□□□ 0.49
CPNE6-204ENST00000557829 MLH3Q9UHC1 1453 aa18.13■□□□□ 0.49
CPNE6-204ENST00000557829 RICTORQ6R327 1708 aa18.12■□□□□ 0.49
CPNE6-204ENST00000557829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
CPNE6-204ENST00000557829 HECW2Q9P2P5 1572 aa18.1■□□□□ 0.49
CPNE6-204ENST00000557829 C11orf95C9JLR9 678 aaPredicted RBP18.1■□□□□ 0.49
CPNE6-204ENST00000557829 NBPF8Q3BBV2 869 aa18.1■□□□□ 0.49
CPNE6-204ENST00000557829 DHX29Q7Z478 1369 aaKnown RBP18.1■□□□□ 0.49
CPNE6-204ENST00000557829 ZBED9Q6R2W3 1325 aa18.09■□□□□ 0.49
CPNE6-204ENST00000557829 PKD2Q13563 968 aa18.08■□□□□ 0.49
CPNE6-204ENST00000557829 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.48
CPNE6-204ENST00000557829 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
CPNE6-204ENST00000557829 FAM135AQ9P2D6 1515 aa18.07■□□□□ 0.48
CPNE6-204ENST00000557829 ABCA6Q8N139 1617 aa18.06■□□□□ 0.48
CPNE6-204ENST00000557829 A2MP01023 1474 aa18.06■□□□□ 0.48
CPNE6-204ENST00000557829 MAGI2Q86UL8 1455 aa18.06■□□□□ 0.48
CPNE6-204ENST00000557829 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
CPNE6-204ENST00000557829 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
CPNE6-204ENST00000557829 KIF7Q2M1P5 1343 aa18.05■□□□□ 0.48
CPNE6-204ENST00000557829 KIF3BO15066 747 aa18.05■□□□□ 0.48
CPNE6-204ENST00000557829 ARID4BQ4LE39 1312 aaPredicted RBP18.05■□□□□ 0.48
CPNE6-204ENST00000557829 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
CPNE6-204ENST00000557829 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
CPNE6-204ENST00000557829 DIP2CQ9Y2E4 1556 aa18.02■□□□□ 0.48
CPNE6-204ENST00000557829 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.48
CPNE6-204ENST00000557829 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
CPNE6-204ENST00000557829 EIF2AK4Q9P2K8 1649 aaKnown RBP18■□□□□ 0.47
CPNE6-204ENST00000557829 DEPDC5O75140 1603 aa17.99■□□□□ 0.47
CPNE6-204ENST00000557829 MROH1Q8NDA8 1641 aa17.98■□□□□ 0.47
CPNE6-204ENST00000557829 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
CPNE6-204ENST00000557829 SIGLEC1Q9BZZ2 1709 aa17.98■□□□□ 0.47
CPNE6-204ENST00000557829 ARHGEF40Q8TER5 1519 aa17.97■□□□□ 0.47
CPNE6-204ENST00000557829 UHRF1BP1Q6BDS2 1440 aa17.97■□□□□ 0.47
CPNE6-204ENST00000557829 BCORL1Q5H9F3 1711 aa17.96■□□□□ 0.47
CPNE6-204ENST00000557829 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
CPNE6-204ENST00000557829 PRDM15P57071 1507 aaPredicted RBP17.95■□□□□ 0.46
CPNE6-204ENST00000557829 VWDEQ8N2E2 1590 aa17.95■□□□□ 0.46
CPNE6-204ENST00000557829 IRX6P78412 446 aaPredicted RBP17.95■□□□□ 0.46
CPNE6-204ENST00000557829 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
CPNE6-204ENST00000557829 PLA2R1Q13018 1463 aa17.93■□□□□ 0.46
CPNE6-204ENST00000557829 KANK1Q14678 1352 aa17.93■□□□□ 0.46
CPNE6-204ENST00000557829 USP47Q96K76 1375 aa17.93■□□□□ 0.46
CPNE6-204ENST00000557829 GGT6Q6P531 493 aa17.93■□□□□ 0.46
CPNE6-204ENST00000557829 RNF17Q9BXT8 1623 aaKnown RBP17.93■□□□□ 0.46
CPNE6-204ENST00000557829 MSH5O43196 834 aa17.93■□□□□ 0.46
CPNE6-204ENST00000557829 ATP10AO60312 1499 aa17.92■□□□□ 0.46
CPNE6-204ENST00000557829 RALGAPBQ86X10 1494 aa17.92■□□□□ 0.46
CPNE6-204ENST00000557829 E9PCH4 1651 aa17.92■□□□□ 0.46
CPNE6-204ENST00000557829 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
CPNE6-204ENST00000557829 TET3O43151 1660 aa17.88■□□□□ 0.45
CPNE6-204ENST00000557829 KTN1Q86UP2 1357 aaKnown RBP17.87■□□□□ 0.45
CPNE6-204ENST00000557829 SPHKAPQ2M3C7 1700 aa17.87■□□□□ 0.45
CPNE6-204ENST00000557829 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
CPNE6-204ENST00000557829 LMTK2Q8IWU2 1503 aa17.86■□□□□ 0.45
CPNE6-204ENST00000557829 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
CPNE6-204ENST00000557829 CEP152O94986 1710 aa17.86■□□□□ 0.45
CPNE6-204ENST00000557829 CCDC144AA2RUR9 1427 aa17.85■□□□□ 0.45
CPNE6-204ENST00000557829 REREQ9P2R6 1566 aa17.85■□□□□ 0.45
CPNE6-204ENST00000557829 ABCC3O15438 1527 aa17.84■□□□□ 0.45
CPNE6-204ENST00000557829 WASHC2CQ9Y4E1 1318 aa17.84■□□□□ 0.45
CPNE6-204ENST00000557829 EFCAB6Q5THR3 1501 aa17.84■□□□□ 0.45
CPNE6-204ENST00000557829 PTPRTO14522 1441 aa17.82■□□□□ 0.44
CPNE6-204ENST00000557829 AGLP35573 1532 aa17.82■□□□□ 0.44
CPNE6-204ENST00000557829 B4GALNT3Q6L9W6 998 aa17.81■□□□□ 0.44
CPNE6-204ENST00000557829 PNISRQ8TF01 805 aaKnown RBP17.8■□□□□ 0.44
CPNE6-204ENST00000557829 NPATQ14207 1427 aa17.8■□□□□ 0.44
CPNE6-204ENST00000557829 ERICH6Q7L0X2 663 aa17.8■□□□□ 0.44
CPNE6-204ENST00000557829 TRPM2O94759 1503 aa17.79■□□□□ 0.44
CPNE6-204ENST00000557829 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
CPNE6-204ENST00000557829 BRD4O60885 1362 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms