RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 EPAS1Q99814 870 aa7.97□□□□□ -1.13
FOXN3-216ENST00000557496 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
FOXN3-216ENST00000557496 PROX2Q3B8N5 592 aa7.96□□□□□ -1.14
FOXN3-216ENST00000557496 MRPL50Q8N5N7 158 aaKnown RBP7.96□□□□□ -1.14
FOXN3-216ENST00000557496 NBPF3Q9H094 633 aa7.96□□□□□ -1.14
FOXN3-216ENST00000557496 THSD4Q6ZMP0 1018 aa7.95□□□□□ -1.14
FOXN3-216ENST00000557496 DDX12PQ92771 950 aa7.95□□□□□ -1.14
FOXN3-216ENST00000557496 C6orf132Q5T0Z8 1188 aa7.94□□□□□ -1.14
FOXN3-216ENST00000557496 RABGEF1Q9UJ41 708 aa7.94□□□□□ -1.14
FOXN3-216ENST00000557496 E2F4Q16254 413 aa7.93□□□□□ -1.14
FOXN3-216ENST00000557496 WNT2BQ93097 391 aa7.93□□□□□ -1.14
FOXN3-216ENST00000557496 ARIH1Q9Y4X5 557 aaPredicted RBP7.93□□□□□ -1.14
FOXN3-216ENST00000557496 GOLGA8CPA6NN73 597 aa7.92□□□□□ -1.14
FOXN3-216ENST00000557496 SPDYE16A6NNV3 312 aaPredicted RBP7.92□□□□□ -1.14
FOXN3-216ENST00000557496 PTPN5P54829 565 aa7.92□□□□□ -1.14
FOXN3-216ENST00000557496 EN1Q05925 392 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-216ENST00000557496 NBR1Q14596 966 aa7.91□□□□□ -1.14
FOXN3-216ENST00000557496 RBM33Q96EV2 1170 aaKnown RBP7.91□□□□□ -1.14
FOXN3-216ENST00000557496 WDR70Q9NW82 654 aa7.9□□□□□ -1.14
FOXN3-216ENST00000557496 ONECUT3O60422 494 aaPredicted RBP7.89□□□□□ -1.15
FOXN3-216ENST00000557496 KIAA1468Q9P260 1216 aa7.89□□□□□ -1.15
FOXN3-216ENST00000557496 TRIM6-TRIM34B2RNG4 842 aa7.88□□□□□ -1.15
FOXN3-216ENST00000557496 TSR1Q2NL82 804 aaKnown RBP7.88□□□□□ -1.15
FOXN3-216ENST00000557496 LAPTM4BQ86VI4 370 aa7.88□□□□□ -1.15
FOXN3-216ENST00000557496 MAP3K7O43318 606 aa7.87□□□□□ -1.15
FOXN3-216ENST00000557496 ANKK1Q8NFD2 765 aa7.86□□□□□ -1.15
FOXN3-216ENST00000557496 PRIM1P49642 420 aaKnown RBP7.85□□□□□ -1.15
FOXN3-216ENST00000557496 ZFRQ96KR1 1074 aaKnown RBP7.85□□□□□ -1.15
FOXN3-216ENST00000557496 SEPT9Q9UHD8 586 aaPredicted RBP7.85□□□□□ -1.15
FOXN3-216ENST00000557496 SOWAHBA6NEL2 793 aa7.84□□□□□ -1.15
FOXN3-216ENST00000557496 IFFO2Q5TF58 517 aa7.84□□□□□ -1.15
FOXN3-216ENST00000557496 BCAMP50895 628 aa7.83□□□□□ -1.16
FOXN3-216ENST00000557496 FAM98CQ17RN3 349 aaKnown RBP7.83□□□□□ -1.16
FOXN3-216ENST00000557496 TSKSQ9UJT2 592 aa7.83□□□□□ -1.16
FOXN3-216ENST00000557496 GRXCR2A6NFK2 248 aa7.82□□□□□ -1.16
FOXN3-216ENST00000557496 OSBPP22059 807 aa7.81□□□□□ -1.16
FOXN3-216ENST00000557496 TSHZ2Q9NRE2 1034 aa7.81□□□□□ -1.16
FOXN3-216ENST00000557496 CERKQ8TCT0 537 aa7.8□□□□□ -1.16
FOXN3-216ENST00000557496 CDCA7LQ96GN5 454 aa7.8□□□□□ -1.16
FOXN3-216ENST00000557496 PACS2Q86VP3 889 aa7.79□□□□□ -1.16
FOXN3-216ENST00000557496 CDHR5Q9HBB8 845 aa7.79□□□□□ -1.16
FOXN3-216ENST00000557496 PRSS12P56730 875 aa7.78□□□□□ -1.16
FOXN3-216ENST00000557496 NYAP1Q6ZVC0 841 aa7.78□□□□□ -1.16
FOXN3-216ENST00000557496 WBP1LQ9NX94 342 aa7.78□□□□□ -1.16
FOXN3-216ENST00000557496 FAM198AQ9UFP1 575 aa7.78□□□□□ -1.16
FOXN3-216ENST00000557496 A0A0G2JS52 829 aa7.77□□□□□ -1.17
FOXN3-216ENST00000557496 ITGBL1O95965 494 aaPredicted RBP7.77□□□□□ -1.17
FOXN3-216ENST00000557496 LRCH3Q96II8 777 aa7.77□□□□□ -1.17
FOXN3-216ENST00000557496 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.77□□□□□ -1.17
FOXN3-216ENST00000557496 C3orf80F5H4A9 247 aa7.76□□□□□ -1.17
FOXN3-216ENST00000557496 KCNV2Q8TDN2 545 aa7.76□□□□□ -1.17
FOXN3-216ENST00000557496 ARHGEF1Q92888 912 aaKnown RBP7.76□□□□□ -1.17
FOXN3-216ENST00000557496 RBM27Q9P2N5 1060 aaKnown RBP7.76□□□□□ -1.17
FOXN3-216ENST00000557496 TSR3Q9UJK0 312 aaKnown RBP7.75□□□□□ -1.17
FOXN3-216ENST00000557496 HPS5Q9UPZ3 1129 aa7.75□□□□□ -1.17
FOXN3-216ENST00000557496 NBPF26B4DH59 902 aa7.74□□□□□ -1.17
FOXN3-216ENST00000557496 SMAPO00193 183 aa7.74□□□□□ -1.17
FOXN3-216ENST00000557496 TATDN2Q93075 761 aa7.73□□□□□ -1.17
FOXN3-216ENST00000557496 NPDC1Q9NQX5 325 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-216ENST00000557496 RGS20O76081 388 aa7.72□□□□□ -1.17
FOXN3-216ENST00000557496 MLLT3P42568 568 aaPredicted RBP7.72□□□□□ -1.17
FOXN3-216ENST00000557496 TTC13Q8NBP0 860 aa7.72□□□□□ -1.17
FOXN3-216ENST00000557496 PNMA3Q9UL41 463 aa7.72□□□□□ -1.17
FOXN3-216ENST00000557496 SAMD7Q7Z3H4 446 aa7.71□□□□□ -1.18
FOXN3-216ENST00000557496 PADI6Q6TGC4 694 aa7.7□□□□□ -1.18
FOXN3-216ENST00000557496 NUDT18Q6ZVK8 323 aa7.7□□□□□ -1.18
FOXN3-216ENST00000557496 PPP4CP60510 307 aa7.68□□□□□ -1.18
FOXN3-216ENST00000557496 KCNC4Q03721 635 aa7.68□□□□□ -1.18
FOXN3-216ENST00000557496 P3H3Q8IVL6 736 aa7.68□□□□□ -1.18
FOXN3-216ENST00000557496 PLCB2Q00722 1185 aa7.65□□□□□ -1.18
FOXN3-216ENST00000557496 PTGDRQ13258 359 aa7.64□□□□□ -1.19
FOXN3-216ENST00000557496 EYA1Q99502 592 aa7.64□□□□□ -1.19
FOXN3-216ENST00000557496 RNF40O75150 1001 aa7.63□□□□□ -1.19
FOXN3-216ENST00000557496 TJAP1Q5JTD0 557 aa7.63□□□□□ -1.19
FOXN3-216ENST00000557496 SEMA3EO15041 775 aa7.62□□□□□ -1.19
FOXN3-216ENST00000557496 HDGFP51858 240 aaKnown RBP7.62□□□□□ -1.19
FOXN3-216ENST00000557496 SWT1Q5T5J6 900 aaKnown RBP7.62□□□□□ -1.19
FOXN3-216ENST00000557496 APLP1P51693 650 aa7.61□□□□□ -1.19
FOXN3-216ENST00000557496 MTRQ99707 1265 aa7.61□□□□□ -1.19
FOXN3-216ENST00000557496 SLF2Q8IX21 1173 aa7.6□□□□□ -1.19
FOXN3-216ENST00000557496 NECTIN2Q92692 538 aa7.59□□□□□ -1.19
FOXN3-216ENST00000557496 IRX2Q9BZI1 471 aaPredicted RBP7.59□□□□□ -1.19
FOXN3-216ENST00000557496 IL21Q9HBE4 155 aa7.59□□□□□ -1.19
FOXN3-216ENST00000557496 NUTM2FA1L443 756 aa7.58□□□□□ -1.2
FOXN3-216ENST00000557496 ADGRG1Q9Y653 693 aa7.58□□□□□ -1.2
FOXN3-216ENST00000557496 DNAJB2P25686 324 aa7.57□□□□□ -1.2
FOXN3-216ENST00000557496 TESPA1A2RU30 521 aaPredicted RBP7.56□□□□□ -1.2
FOXN3-216ENST00000557496 FCHSD2O94868 740 aa7.56□□□□□ -1.2
FOXN3-216ENST00000557496 RBM46Q8TBY0 533 aaKnown RBP7.56□□□□□ -1.2
FOXN3-216ENST00000557496 SLC4A3P48751 1232 aa7.55□□□□□ -1.2
FOXN3-216ENST00000557496 ZNF516Q92618 1163 aa7.55□□□□□ -1.2
FOXN3-216ENST00000557496 TMEM134Q9H6X4 195 aa7.55□□□□□ -1.2
FOXN3-216ENST00000557496 FAM161AQ3B820 660 aa7.54□□□□□ -1.2
FOXN3-216ENST00000557496 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
FOXN3-216ENST00000557496 PPP1R18Q6NYC8 613 aa7.53□□□□□ -1.2
FOXN3-216ENST00000557496 COPS2P61201 443 aa7.52□□□□□ -1.21
FOXN3-216ENST00000557496 HIC1Q14526 733 aa7.52□□□□□ -1.21
FOXN3-216ENST00000557496 RBM26Q5T8P6 1007 aaKnown RBP7.52□□□□□ -1.21
FOXN3-216ENST00000557496 PRR14Q9BWN1 585 aa7.52□□□□□ -1.21
FOXN3-216ENST00000557496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms