RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 KIF3BO15066 747 aa22.61■■□□□ 1.21
SLIRP-210ENST00000557431 NEURL4Q96JN8 1562 aa22.6■■□□□ 1.21
SLIRP-210ENST00000557431 FBXO31Q5XUX0 539 aaPredicted RBP22.6■■□□□ 1.21
SLIRP-210ENST00000557431 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
SLIRP-210ENST00000557431 ARHGEF5Q12774 1597 aa22.58■■□□□ 1.2
SLIRP-210ENST00000557431 PKD2Q13563 968 aa22.56■■□□□ 1.2
SLIRP-210ENST00000557431 CEP152O94986 1710 aa22.56■■□□□ 1.2
SLIRP-210ENST00000557431 TNRQ92752 1358 aa22.55■■□□□ 1.2
SLIRP-210ENST00000557431 PZPP20742 1482 aa22.54■■□□□ 1.2
SLIRP-210ENST00000557431 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
SLIRP-210ENST00000557431 UBAP1LF5GYI3 381 aa22.53■■□□□ 1.2
SLIRP-210ENST00000557431 LOC105371045A0A1W2PR82 267 aa22.52■■□□□ 1.2
SLIRP-210ENST00000557431 RNF17Q9BXT8 1623 aaKnown RBP22.51■■□□□ 1.19
SLIRP-210ENST00000557431 LRRC9Q6ZRR7 1453 aa22.51■■□□□ 1.19
SLIRP-210ENST00000557431 WASHC2CQ9Y4E1 1318 aa22.49■■□□□ 1.19
SLIRP-210ENST00000557431 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
SLIRP-210ENST00000557431 FAM135AQ9P2D6 1515 aa22.48■■□□□ 1.19
SLIRP-210ENST00000557431 MAST1Q9Y2H9 1570 aa22.48■■□□□ 1.19
SLIRP-210ENST00000557431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.48■■□□□ 1.19
SLIRP-210ENST00000557431 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
SLIRP-210ENST00000557431 ZC3H13Q5T200 1668 aaKnown RBP22.47■■□□□ 1.19
SLIRP-210ENST00000557431 MROH1Q8NDA8 1641 aa22.46■■□□□ 1.19
SLIRP-210ENST00000557431 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
SLIRP-210ENST00000557431 KANK4Q5T7N3 995 aaPredicted RBP22.45■■□□□ 1.18
SLIRP-210ENST00000557431 ABCC3O15438 1527 aa22.45■■□□□ 1.18
SLIRP-210ENST00000557431 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
SLIRP-210ENST00000557431 VWDEQ8N2E2 1590 aa22.44■■□□□ 1.18
SLIRP-210ENST00000557431 EIF2AK4Q9P2K8 1649 aaKnown RBP22.44■■□□□ 1.18
SLIRP-210ENST00000557431 TSPY4P0CV99 314 aa22.43■■□□□ 1.18
SLIRP-210ENST00000557431 TSPY10P0CW01 314 aa22.43■■□□□ 1.18
SLIRP-210ENST00000557431 CROCC2H7BZ55 1655 aa22.42■■□□□ 1.18
SLIRP-210ENST00000557431 MIA2Q96PC5 1412 aa22.42■■□□□ 1.18
SLIRP-210ENST00000557431 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
SLIRP-210ENST00000557431 SOCS7O14512 581 aa22.42■■□□□ 1.18
SLIRP-210ENST00000557431 RSPH4AQ5TD94 716 aa22.42■■□□□ 1.18
SLIRP-210ENST00000557431 SHANK2Q9UPX8 1470 aa22.41■■□□□ 1.18
SLIRP-210ENST00000557431 DEPDC5O75140 1603 aa22.41■■□□□ 1.18
SLIRP-210ENST00000557431 UBR1Q8IWV7 1749 aa22.4■■□□□ 1.18
SLIRP-210ENST00000557431 CPS1P31327 1500 aa22.4■■□□□ 1.18
SLIRP-210ENST00000557431 NLRP1Q9C000 1473 aa22.4■■□□□ 1.18
SLIRP-210ENST00000557431 PIP4K2BP78356 416 aa22.39■■□□□ 1.17
SLIRP-210ENST00000557431 ERVK-7P63135 1459 aa22.37■■□□□ 1.17
SLIRP-210ENST00000557431 NPHP4O75161 1426 aaPredicted RBP22.37■■□□□ 1.17
SLIRP-210ENST00000557431 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
SLIRP-210ENST00000557431 ALKQ9UM73 1620 aa22.36■■□□□ 1.17
SLIRP-210ENST00000557431 ANKLE2Q86XL3 938 aa22.36■■□□□ 1.17
SLIRP-210ENST00000557431 HSPA1LP34931 641 aa22.34■■□□□ 1.17
SLIRP-210ENST00000557431 THEMISQ8N1K5 641 aaPredicted RBP22.34■■□□□ 1.17
SLIRP-210ENST00000557431 MED14O60244 1454 aa22.34■■□□□ 1.17
SLIRP-210ENST00000557431 PTPN23Q9H3S7 1636 aa22.33■■□□□ 1.17
SLIRP-210ENST00000557431 MED1Q15648 1581 aaPredicted RBP22.33■■□□□ 1.16
SLIRP-210ENST00000557431 MAP3K1Q13233 1512 aa22.32■■□□□ 1.16
SLIRP-210ENST00000557431 DUOX2Q9NRD8 1548 aa22.31■■□□□ 1.16
SLIRP-210ENST00000557431 XIRP1Q702N8 1843 aaKnown RBP22.31■■□□□ 1.16
SLIRP-210ENST00000557431 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
SLIRP-210ENST00000557431 PRDM15P57071 1507 aaPredicted RBP22.28■■□□□ 1.16
SLIRP-210ENST00000557431 PIK3C2BO00750 1634 aa22.28■■□□□ 1.16
SLIRP-210ENST00000557431 TOM1O60784 492 aa22.26■■□□□ 1.15
SLIRP-210ENST00000557431 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
SLIRP-210ENST00000557431 SYNMO15061 1565 aa22.25■■□□□ 1.15
SLIRP-210ENST00000557431 ABCC5O15440 1437 aa22.25■■□□□ 1.15
SLIRP-210ENST00000557431 LRRC7Q96NW7 1537 aa22.25■■□□□ 1.15
SLIRP-210ENST00000557431 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
SLIRP-210ENST00000557431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.154e-8■■■■□ 19.3
SLIRP-210ENST00000557431 DAPK1P53355 1430 aa22.21■■□□□ 1.15
SLIRP-210ENST00000557431 SCAF11Q99590 1463 aaKnown RBP22.21■■□□□ 1.15
SLIRP-210ENST00000557431 MYO5BQ9ULV0 1848 aa22.2■■□□□ 1.14
SLIRP-210ENST00000557431 LTKP29376 864 aa22.19■■□□□ 1.14
SLIRP-210ENST00000557431 ERBINQ96RT1 1412 aa22.19■■□□□ 1.14
SLIRP-210ENST00000557431 SLIT1O75093 1534 aa22.18■■□□□ 1.14
SLIRP-210ENST00000557431 ARHGAP23Q9P227 1491 aa22.18■■□□□ 1.14
SLIRP-210ENST00000557431 CHIC2Q9UKJ5 165 aa22.18■■□□□ 1.14
SLIRP-210ENST00000557431 FGD6Q6ZV73 1430 aa22.16■■□□□ 1.14
SLIRP-210ENST00000557431 ARHGAP31Q2M1Z3 1444 aa22.14■■□□□ 1.14
SLIRP-210ENST00000557431 TXNDC2Q86VQ3 553 aa22.14■■□□□ 1.13
SLIRP-210ENST00000557431 APLP2Q06481 763 aa22.12■■□□□ 1.13
SLIRP-210ENST00000557431 KDM5AP29375 1690 aaKnown RBP22.1■■□□□ 1.13
SLIRP-210ENST00000557431 EFCAB6Q5THR3 1501 aa22.09■■□□□ 1.13
SLIRP-210ENST00000557431 KANK1Q14678 1352 aa22.08■■□□□ 1.12
SLIRP-210ENST00000557431 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
SLIRP-210ENST00000557431 LMTK2Q8IWU2 1503 aa22.07■■□□□ 1.12
SLIRP-210ENST00000557431 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
SLIRP-210ENST00000557431 PHF23Q9BUL5 403 aaPredicted RBP22.06■■□□□ 1.12
SLIRP-210ENST00000557431 ANKRD30AQ9BXX3 1397 aa22.06■■□□□ 1.12
SLIRP-210ENST00000557431 TMEM2Q9UHN6 1383 aa22.06■■□□□ 1.12
SLIRP-210ENST00000557431 ADGRB3O60242 1522 aa22.05■■□□□ 1.12
SLIRP-210ENST00000557431 IDI1Q13907 227 aa22.04■■□□□ 1.12
SLIRP-210ENST00000557431 EID1Q9Y6B2 187 aa22.04■■□□□ 1.12
SLIRP-210ENST00000557431 RBM33Q96EV2 1170 aaKnown RBP22.03■■□□□ 1.12
SLIRP-210ENST00000557431 TET3O43151 1660 aa22.01■■□□□ 1.11
SLIRP-210ENST00000557431 ROBO1Q9Y6N7 1651 aa22.01■■□□□ 1.11
SLIRP-210ENST00000557431 SLC26A8Q96RN1 970 aa22.01■■□□□ 1.11
SLIRP-210ENST00000557431 NOS1P29475 1434 aa22■■□□□ 1.11
SLIRP-210ENST00000557431 FAM50AQ14320 339 aaKnown RBP22■■□□□ 1.11
SLIRP-210ENST00000557431 ADGRL2O95490 1459 aa22■■□□□ 1.11
SLIRP-210ENST00000557431 CHD2O14647 1828 aaKnown RBP21.98■■□□□ 1.11
SLIRP-210ENST00000557431 TMEM94Q12767 1356 aa21.98■■□□□ 1.11
SLIRP-210ENST00000557431 NWD1Q149M9 1564 aa21.96■■□□□ 1.11
SLIRP-210ENST00000557431 E9PCH4 1651 aa21.95■■□□□ 1.1
SLIRP-210ENST00000557431 TMEM131LA2VDJ0 1609 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms