RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
SUPT16H-207ENST00000557394 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
SUPT16H-207ENST00000557394 PRG4Q92954 1404 aaPredicted RBP13.87□□□□□ -0.19
SUPT16H-207ENST00000557394 NFKBIBQ15653 356 aa13.87□□□□□ -0.19
SUPT16H-207ENST00000557394 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
SUPT16H-207ENST00000557394 DENND4BO75064 1496 aaPredicted RBP13.85□□□□□ -0.19
SUPT16H-207ENST00000557394 HECW1Q76N89 1606 aa13.84□□□□□ -0.19
SUPT16H-207ENST00000557394 SPATA31E1Q6ZUB1 1445 aa13.84□□□□□ -0.19
SUPT16H-207ENST00000557394 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
SUPT16H-207ENST00000557394 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.2
SUPT16H-207ENST00000557394 KIF7Q2M1P5 1343 aa13.83□□□□□ -0.2
SUPT16H-207ENST00000557394 RRP1P56182 461 aaKnown RBP13.81□□□□□ -0.2
SUPT16H-207ENST00000557394 ERCC6L2Q5T890 1561 aa13.81□□□□□ -0.2
SUPT16H-207ENST00000557394 CCDC9Q9Y3X0 531 aaKnown RBP13.8□□□□□ -0.2
SUPT16H-207ENST00000557394 EXOC6Q8TAG9 804 aa13.79□□□□□ -0.2
SUPT16H-207ENST00000557394 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
SUPT16H-207ENST00000557394 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
SUPT16H-207ENST00000557394 GCC2Q8IWJ2 1684 aa13.77□□□□□ -0.21
SUPT16H-207ENST00000557394 LRRIQ1Q96JM4 1722 aa13.77□□□□□ -0.21
SUPT16H-207ENST00000557394 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
SUPT16H-207ENST00000557394 L3MBTL2Q969R5 705 aa13.76□□□□□ -0.21
SUPT16H-207ENST00000557394 PTPRGP23470 1445 aa13.76□□□□□ -0.21
SUPT16H-207ENST00000557394 DCAF11Q8TEB1 546 aa13.76□□□□□ -0.21
SUPT16H-207ENST00000557394 KDM2AQ9Y2K7 1162 aa13.76□□□□□ -0.21
SUPT16H-207ENST00000557394 ABCA8O94911 1581 aa13.76□□□□□ -0.21
SUPT16H-207ENST00000557394 LRPPRCP42704 1394 aaKnown RBP13.76□□□□□ -0.21
SUPT16H-207ENST00000557394 MIA2Q96PC5 1412 aa13.74□□□□□ -0.21
SUPT16H-207ENST00000557394 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
SUPT16H-207ENST00000557394 TEX14Q8IWB6 1497 aa13.73□□□□□ -0.21
SUPT16H-207ENST00000557394 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
SUPT16H-207ENST00000557394 PLB1Q6P1J6 1458 aa13.73□□□□□ -0.21
SUPT16H-207ENST00000557394 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
SUPT16H-207ENST00000557394 VSIG10Q8N0Z9 540 aa13.72□□□□□ -0.21
SUPT16H-207ENST00000557394 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
SUPT16H-207ENST00000557394 ATP1B4Q9UN42 357 aaPredicted RBP13.72□□□□□ -0.21
SUPT16H-207ENST00000557394 NUP153P49790 1475 aaKnown RBP13.71□□□□□ -0.21
SUPT16H-207ENST00000557394 RPRD2Q5VT52 1461 aaKnown RBP13.71□□□□□ -0.21
SUPT16H-207ENST00000557394 EPRSP07814 1512 aaKnown RBP13.71□□□□□ -0.21
SUPT16H-207ENST00000557394 ARID4BQ4LE39 1312 aaPredicted RBP13.68□□□□□ -0.22
SUPT16H-207ENST00000557394 FRAT2O75474 233 aaPredicted RBP13.68□□□□□ -0.22
SUPT16H-207ENST00000557394 RRAGDQ9NQL2 400 aaPredicted RBP13.68□□□□□ -0.22
SUPT16H-207ENST00000557394 ARHGEF11O15085 1522 aa13.68□□□□□ -0.22
SUPT16H-207ENST00000557394 ABCC2Q92887 1545 aa13.68□□□□□ -0.22
SUPT16H-207ENST00000557394 MTUS2Q5JR59 1369 aa13.67□□□□□ -0.22
SUPT16H-207ENST00000557394 SLC4A3P48751 1232 aa13.67□□□□□ -0.22
SUPT16H-207ENST00000557394 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
SUPT16H-207ENST00000557394 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
SUPT16H-207ENST00000557394 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
SUPT16H-207ENST00000557394 TCOF1Q13428 1488 aaKnown RBP13.67□□□□□ -0.22
SUPT16H-207ENST00000557394 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
SUPT16H-207ENST00000557394 KDM6BO15054 1643 aa13.67□□□□□ -0.22
SUPT16H-207ENST00000557394 ANKRD30BQ9BXX2 1392 aa13.66□□□□□ -0.22
SUPT16H-207ENST00000557394 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
SUPT16H-207ENST00000557394 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
SUPT16H-207ENST00000557394 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
SUPT16H-207ENST00000557394 PUS7Q96PZ0 661 aaKnown RBP13.65□□□□□ -0.22
SUPT16H-207ENST00000557394 TMC1Q8TDI8 760 aa13.65□□□□□ -0.22
SUPT16H-207ENST00000557394 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.65□□□□□ -0.22
SUPT16H-207ENST00000557394 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
SUPT16H-207ENST00000557394 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
SUPT16H-207ENST00000557394 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
SUPT16H-207ENST00000557394 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
SUPT16H-207ENST00000557394 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
SUPT16H-207ENST00000557394 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
SUPT16H-207ENST00000557394 RRP9O43818 475 aaKnown RBP13.63□□□□□ -0.23
SUPT16H-207ENST00000557394 KDM2BQ8NHM5 1336 aa13.63□□□□□ -0.23
SUPT16H-207ENST00000557394 ROCK2O75116 1388 aaKnown RBP13.63□□□□□ -0.23
SUPT16H-207ENST00000557394 ATP10BO94823 1461 aa13.62□□□□□ -0.23
SUPT16H-207ENST00000557394 ADCY10Q96PN6 1610 aa13.62□□□□□ -0.23
SUPT16H-207ENST00000557394 TICAM2Q86XR7 235 aa13.62□□□□□ -0.23
SUPT16H-207ENST00000557394 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
SUPT16H-207ENST00000557394 PRDM10Q9NQV6 1147 aa13.62□□□□□ -0.23
SUPT16H-207ENST00000557394 MAGI3Q5TCQ9 1506 aa13.62□□□□□ -0.23
SUPT16H-207ENST00000557394 ZNF592Q92610 1267 aa13.62□□□□□ -0.23
SUPT16H-207ENST00000557394 RRP7BPQ9NSQ0 103 aa13.62□□□□□ -0.23
SUPT16H-207ENST00000557394 FAM161AQ3B820 660 aa13.61□□□□□ -0.23
SUPT16H-207ENST00000557394 C8orf34Q49A92 452 aa13.61□□□□□ -0.23
SUPT16H-207ENST00000557394 L1TD1Q5T7N2 865 aaKnown RBP13.61□□□□□ -0.23
SUPT16H-207ENST00000557394 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
SUPT16H-207ENST00000557394 MBD5Q9P267 1494 aa13.6□□□□□ -0.23
SUPT16H-207ENST00000557394 KIF15Q9NS87 1388 aa13.6□□□□□ -0.23
SUPT16H-207ENST00000557394 SKAP1Q86WV1 359 aa13.6□□□□□ -0.23
SUPT16H-207ENST00000557394 ZCCHC11Q5TAX3 1644 aaKnown RBP13.6□□□□□ -0.23
SUPT16H-207ENST00000557394 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
SUPT16H-207ENST00000557394 NCLP19338 710 aaKnown RBP13.59□□□□□ -0.23
SUPT16H-207ENST00000557394 MYBBP1AQ9BQG0 1328 aaKnown RBP13.59□□□□□ -0.23
SUPT16H-207ENST00000557394 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
SUPT16H-207ENST00000557394 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
SUPT16H-207ENST00000557394 CRBNQ96SW2 442 aa13.58□□□□□ -0.23
SUPT16H-207ENST00000557394 CHMP4BQ9H444 224 aaKnown RBP13.58□□□□□ -0.23
SUPT16H-207ENST00000557394 KDM5CP41229 1560 aa13.58□□□□□ -0.24
SUPT16H-207ENST00000557394 HSP90AA2PQ14568 343 aaPredicted RBP13.58□□□□□ -0.24
SUPT16H-207ENST00000557394 USP47Q96K76 1375 aa13.58□□□□□ -0.24
SUPT16H-207ENST00000557394 CLCN1P35523 988 aa13.57□□□□□ -0.24
SUPT16H-207ENST00000557394 INSRP06213 1382 aa13.57□□□□□ -0.24
SUPT16H-207ENST00000557394 RALBP1Q15311 655 aa13.57□□□□□ -0.24
SUPT16H-207ENST00000557394 CENPQQ7L2Z9 268 aaPredicted RBP13.57□□□□□ -0.24
SUPT16H-207ENST00000557394 POGKQ9P215 609 aa13.57□□□□□ -0.24
SUPT16H-207ENST00000557394 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
SUPT16H-207ENST00000557394 ZMYM4Q5VZL5 1548 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms