RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 NCOA2Q15596 1464 aa16.29■□□□□ 0.2
RDH11-209ENST00000557273 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
RDH11-209ENST00000557273 ARHGEF5Q12774 1597 aa16.29■□□□□ 0.2
RDH11-209ENST00000557273 PZPP20742 1482 aa16.29■□□□□ 0.2
RDH11-209ENST00000557273 ZNF335Q9H4Z2 1342 aaPredicted RBP16.28■□□□□ 0.2
RDH11-209ENST00000557273 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
RDH11-209ENST00000557273 ILDR2Q71H61 639 aa16.25■□□□□ 0.19
RDH11-209ENST00000557273 TNRQ92752 1358 aa16.25■□□□□ 0.19
RDH11-209ENST00000557273 SOCS7O14512 581 aa16.23■□□□□ 0.19
RDH11-209ENST00000557273 KIF3BO15066 747 aa16.23■□□□□ 0.19
RDH11-209ENST00000557273 RNF17Q9BXT8 1623 aaKnown RBP16.23■□□□□ 0.19
RDH11-209ENST00000557273 NLRP1Q9C000 1473 aa16.22■□□□□ 0.19
RDH11-209ENST00000557273 MAST1Q9Y2H9 1570 aa16.22■□□□□ 0.19
RDH11-209ENST00000557273 CPS1P31327 1500 aa16.22■□□□□ 0.19
RDH11-209ENST00000557273 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.19
RDH11-209ENST00000557273 DEPDC5O75140 1603 aa16.2■□□□□ 0.18
RDH11-209ENST00000557273 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
RDH11-209ENST00000557273 MED14O60244 1454 aa16.19■□□□□ 0.18
RDH11-209ENST00000557273 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
RDH11-209ENST00000557273 UBAP1LF5GYI3 381 aa16.19■□□□□ 0.18
RDH11-209ENST00000557273 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
RDH11-209ENST00000557273 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
RDH11-209ENST00000557273 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
RDH11-209ENST00000557273 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
RDH11-209ENST00000557273 VPS8Q8N3P4 1428 aa16.18■□□□□ 0.18
RDH11-209ENST00000557273 UGGT1Q9NYU2 1555 aa16.17■□□□□ 0.18
RDH11-209ENST00000557273 SHANK2Q9UPX8 1470 aa16.17■□□□□ 0.18
RDH11-209ENST00000557273 VWDEQ8N2E2 1590 aa16.17■□□□□ 0.18
RDH11-209ENST00000557273 ABCC3O15438 1527 aa16.16■□□□□ 0.18
RDH11-209ENST00000557273 TSPY4P0CV99 314 aa16.16■□□□□ 0.18
RDH11-209ENST00000557273 TSPY10P0CW01 314 aa16.16■□□□□ 0.18
RDH11-209ENST00000557273 MROH1Q8NDA8 1641 aa16.15■□□□□ 0.18
RDH11-209ENST00000557273 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
RDH11-209ENST00000557273 THEMISQ8N1K5 641 aaPredicted RBP16.14■□□□□ 0.17
RDH11-209ENST00000557273 IQGAP1P46940 1657 aa16.14■□□□□ 0.17
RDH11-209ENST00000557273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.17
RDH11-209ENST00000557273 NPHP4O75161 1426 aaPredicted RBP16.12■□□□□ 0.17
RDH11-209ENST00000557273 ERVK-7P63135 1459 aa16.11■□□□□ 0.17
RDH11-209ENST00000557273 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
RDH11-209ENST00000557273 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
RDH11-209ENST00000557273 CEP152O94986 1710 aa16.09■□□□□ 0.17
RDH11-209ENST00000557273 TOM1O60784 492 aa16.09■□□□□ 0.17
RDH11-209ENST00000557273 SYNMO15061 1565 aa16.09■□□□□ 0.17
RDH11-209ENST00000557273 ALKQ9UM73 1620 aa16.08■□□□□ 0.17
RDH11-209ENST00000557273 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.17
RDH11-209ENST00000557273 PRDM15P57071 1507 aaPredicted RBP16.08■□□□□ 0.16
RDH11-209ENST00000557273 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.16
RDH11-209ENST00000557273 STRCP1A6NGW2 1772 aa16.07■□□□□ 0.16
RDH11-209ENST00000557273 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
RDH11-209ENST00000557273 ARHGAP31Q2M1Z3 1444 aa16.06■□□□□ 0.16
RDH11-209ENST00000557273 CFAP65Q6ZU64 1925 aaKnown RBP16.06■□□□□ 0.16
RDH11-209ENST00000557273 ERBINQ96RT1 1412 aa16.04■□□□□ 0.16
RDH11-209ENST00000557273 HSPA1LP34931 641 aa16.04■□□□□ 0.16
RDH11-209ENST00000557273 KANK4Q5T7N3 995 aaPredicted RBP16.04■□□□□ 0.16
RDH11-209ENST00000557273 SLIT1O75093 1534 aa16.04■□□□□ 0.16
RDH11-209ENST00000557273 ARHGAP23Q9P227 1491 aa16.03■□□□□ 0.16
RDH11-209ENST00000557273 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
RDH11-209ENST00000557273 SCAF11Q99590 1463 aaKnown RBP16.02■□□□□ 0.15
RDH11-209ENST00000557273 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.15
RDH11-209ENST00000557273 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
RDH11-209ENST00000557273 KIF15Q9NS87 1388 aa16■□□□□ 0.15
RDH11-209ENST00000557273 PIP4K2BP78356 416 aa16■□□□□ 0.15
RDH11-209ENST00000557273 ABCC5O15440 1437 aa16■□□□□ 0.15
RDH11-209ENST00000557273 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
RDH11-209ENST00000557273 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
RDH11-209ENST00000557273 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
RDH11-209ENST00000557273 PIK3C2BO00750 1634 aa15.97■□□□□ 0.15
RDH11-209ENST00000557273 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.15
RDH11-209ENST00000557273 DAPK1P53355 1430 aa15.96■□□□□ 0.15
RDH11-209ENST00000557273 LTKP29376 864 aa15.94■□□□□ 0.14
RDH11-209ENST00000557273 FGD6Q6ZV73 1430 aa15.94■□□□□ 0.14
RDH11-209ENST00000557273 TMEM2Q9UHN6 1383 aa15.93■□□□□ 0.14
RDH11-209ENST00000557273 TXNDC2Q86VQ3 553 aa15.92■□□□□ 0.14
RDH11-209ENST00000557273 KANK1Q14678 1352 aa15.91■□□□□ 0.14
RDH11-209ENST00000557273 EFCAB6Q5THR3 1501 aa15.91■□□□□ 0.14
RDH11-209ENST00000557273 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
RDH11-209ENST00000557273 ANKRD30AQ9BXX3 1397 aa15.9■□□□□ 0.14
RDH11-209ENST00000557273 EID1Q9Y6B2 187 aa15.9■□□□□ 0.14
RDH11-209ENST00000557273 ADGRL2O95490 1459 aa15.9■□□□□ 0.14
RDH11-209ENST00000557273 NOS1P29475 1434 aa15.89■□□□□ 0.13
RDH11-209ENST00000557273 TET3O43151 1660 aa15.89■□□□□ 0.13
RDH11-209ENST00000557273 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
RDH11-209ENST00000557273 APLP2Q06481 763 aa15.87■□□□□ 0.13
RDH11-209ENST00000557273 ADGRB3O60242 1522 aa15.87■□□□□ 0.13
RDH11-209ENST00000557273 RPRD2Q5VT52 1461 aaKnown RBP15.86■□□□□ 0.13
RDH11-209ENST00000557273 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
RDH11-209ENST00000557273 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
RDH11-209ENST00000557273 IDI1Q13907 227 aa15.85■□□□□ 0.13
RDH11-209ENST00000557273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
RDH11-209ENST00000557273 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
RDH11-209ENST00000557273 KCNA6P17658 529 aa15.82■□□□□ 0.12
RDH11-209ENST00000557273 SLC52A1Q9NWF4 448 aa15.82■□□□□ 0.12
RDH11-209ENST00000557273 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
RDH11-209ENST00000557273 TMEM94Q12767 1356 aa15.82■□□□□ 0.12
RDH11-209ENST00000557273 ANKRD50Q9ULJ7 1429 aa15.8■□□□□ 0.12
RDH11-209ENST00000557273 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
RDH11-209ENST00000557273 GCC2Q8IWJ2 1684 aa15.79■□□□□ 0.12
RDH11-209ENST00000557273 ROBO1Q9Y6N7 1651 aa15.79■□□□□ 0.12
RDH11-209ENST00000557273 MYO5BQ9ULV0 1848 aa15.79■□□□□ 0.12
RDH11-209ENST00000557273 ZFYVE9O95405 1425 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms