RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 TRAPPC8Q9Y2L5 1435 aa26.55■■□□□ 1.84
FOXN3-214ENST00000557258 NBPF1Q3BBV0 1214 aa26.53■■□□□ 1.84
FOXN3-214ENST00000557258 ROCK2O75116 1388 aaKnown RBP26.53■■□□□ 1.84
FOXN3-214ENST00000557258 PLCH2O75038 1416 aa26.53■■□□□ 1.84
FOXN3-214ENST00000557258 MYT1LQ9UL68 1186 aa26.52■■□□□ 1.84
FOXN3-214ENST00000557258 KDM5CP41229 1560 aa26.52■■□□□ 1.84
FOXN3-214ENST00000557258 PLA2R1Q13018 1463 aa26.5■■□□□ 1.83
FOXN3-214ENST00000557258 RALGAPBQ86X10 1494 aa26.5■■□□□ 1.83
FOXN3-214ENST00000557258 UHRF1BP1Q6BDS2 1440 aa26.49■■□□□ 1.83
FOXN3-214ENST00000557258 DHX29Q7Z478 1369 aaKnown RBP26.47■■□□□ 1.83
FOXN3-214ENST00000557258 SPAG9O60271 1321 aaKnown RBP26.45■■□□□ 1.82
FOXN3-214ENST00000557258 POLR1AO95602 1720 aaPredicted RBP26.42■■□□□ 1.82
FOXN3-214ENST00000557258 MAST1Q9Y2H9 1570 aa26.41■■□□□ 1.82
FOXN3-214ENST00000557258 UHRF1BP1LA0JNW5 1464 aa26.4■■□□□ 1.82
FOXN3-214ENST00000557258 TSHZ2Q9NRE2 1034 aa26.4■■□□□ 1.82
FOXN3-214ENST00000557258 ABCC1P33527 1531 aa26.39■■□□□ 1.82
FOXN3-214ENST00000557258 UNC13BO14795 1591 aa26.39■■□□□ 1.82
FOXN3-214ENST00000557258 PRAG1Q86YV5 1406 aa26.39■■□□□ 1.81
FOXN3-214ENST00000557258 DUOX2Q9NRD8 1548 aa26.38■■□□□ 1.81
FOXN3-214ENST00000557258 A2MP01023 1474 aa26.38■■□□□ 1.81
FOXN3-214ENST00000557258 PLXNC1O60486 1568 aa26.38■■□□□ 1.81
FOXN3-214ENST00000557258 ERBINQ96RT1 1412 aa26.33■■□□□ 1.8
FOXN3-214ENST00000557258 IQGAP3Q86VI3 1631 aa26.32■■□□□ 1.8
FOXN3-214ENST00000557258 WDR7Q9Y4E6 1490 aa26.32■■□□□ 1.8
FOXN3-214ENST00000557258 KIF3BO15066 747 aa26.3■■□□□ 1.8
FOXN3-214ENST00000557258 FANCAO15360 1455 aa26.3■■□□□ 1.8
FOXN3-214ENST00000557258 SCAPERQ9BY12 1400 aa26.29■■□□□ 1.8
FOXN3-214ENST00000557258 TMC1Q8TDI8 760 aa26.29■■□□□ 1.8
FOXN3-214ENST00000557258 ZBED9Q6R2W3 1325 aa26.26■■□□□ 1.79
FOXN3-214ENST00000557258 TRPM1Q7Z4N2 1603 aa26.26■■□□□ 1.79
FOXN3-214ENST00000557258 ARID4BQ4LE39 1312 aaPredicted RBP26.26■■□□□ 1.79
FOXN3-214ENST00000557258 ASXL2Q76L83 1435 aa26.25■■□□□ 1.79
FOXN3-214ENST00000557258 ZFYVE16Q7Z3T8 1539 aa26.25■■□□□ 1.79
FOXN3-214ENST00000557258 DISP3Q9P2K9 1392 aa26.24■■□□□ 1.79
FOXN3-214ENST00000557258 MAGI2Q86UL8 1455 aa26.23■■□□□ 1.79
FOXN3-214ENST00000557258 ADGRL1O94910 1474 aa26.22■■□□□ 1.79
FOXN3-214ENST00000557258 SALL2Q9Y467 1007 aaPredicted RBP26.22■■□□□ 1.79
FOXN3-214ENST00000557258 CC2D1BQ5T0F9 858 aaKnown RBP26.21■■□□□ 1.79
FOXN3-214ENST00000557258 TESK2Q96S53 571 aa26.2■■□□□ 1.78
FOXN3-214ENST00000557258 PNISRQ8TF01 805 aaKnown RBP26.19■■□□□ 1.78
FOXN3-214ENST00000557258 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
FOXN3-214ENST00000557258 E9PCH4 1651 aa26.17■■□□□ 1.78
FOXN3-214ENST00000557258 ATP7AQ04656 1500 aa26.15■■□□□ 1.78
FOXN3-214ENST00000557258 NPM1P06748 294 aaKnown RBP eCLIP26.15■■□□□ 1.78
FOXN3-214ENST00000557258 ATP10AO60312 1499 aa26.15■■□□□ 1.78
FOXN3-214ENST00000557258 PANK3Q9H999 370 aa26.13■■□□□ 1.77
FOXN3-214ENST00000557258 GPRASP1Q5JY77 1395 aa26.13■■□□□ 1.77
FOXN3-214ENST00000557258 RTEL1-TNFRSF6BF6WH68 1400 aa26.13■■□□□ 1.77
FOXN3-214ENST00000557258 MYBBP1AQ9BQG0 1328 aaKnown RBP26.12■■□□□ 1.77
FOXN3-214ENST00000557258 UGGT1Q9NYU2 1555 aa26.11■■□□□ 1.77
FOXN3-214ENST00000557258 ABCA9Q8IUA7 1624 aa26.1■■□□□ 1.77
FOXN3-214ENST00000557258 PER1O15534 1290 aaPredicted RBP26.09■■□□□ 1.77
FOXN3-214ENST00000557258 PRDM15P57071 1507 aaPredicted RBP26.09■■□□□ 1.77
FOXN3-214ENST00000557258 KANK1Q14678 1352 aa26.08■■□□□ 1.77
FOXN3-214ENST00000557258 TMF1P82094 1093 aa26.08■■□□□ 1.76
FOXN3-214ENST00000557258 B4GALNT3Q6L9W6 998 aa26.08■■□□□ 1.76
FOXN3-214ENST00000557258 COL17A1Q9UMD9 1497 aaPredicted RBP26.07■■□□□ 1.76
FOXN3-214ENST00000557258 KTN1Q86UP2 1357 aaKnown RBP26.07■■□□□ 1.76
FOXN3-214ENST00000557258 CHGAP10645 457 aaKnown RBP26.07■■□□□ 1.76
FOXN3-214ENST00000557258 ARAP3Q8WWN8 1544 aa26.07■■□□□ 1.76
FOXN3-214ENST00000557258 RALBP1Q15311 655 aa26.06■■□□□ 1.76
FOXN3-214ENST00000557258 GGT6Q6P531 493 aa26.06■■□□□ 1.76
FOXN3-214ENST00000557258 CLTCL1P53675 1640 aa26.05■■□□□ 1.76
FOXN3-214ENST00000557258 INO80Q9ULG1 1556 aaPredicted RBP26.05■■□□□ 1.76
FOXN3-214ENST00000557258 SENP3Q9H4L4 574 aaPredicted RBP26.04■■□□□ 1.76
FOXN3-214ENST00000557258 TRPM2O94759 1503 aa26.03■■□□□ 1.76
FOXN3-214ENST00000557258 CFAP70Q5T0N1 1121 aa26.01■■□□□ 1.76
FOXN3-214ENST00000557258 RAPGEF3O95398 923 aa26.01■■□□□ 1.75
FOXN3-214ENST00000557258 EIF2AK4Q9P2K8 1649 aaKnown RBP26.01■■□□□ 1.75
FOXN3-214ENST00000557258 SPHKAPQ2M3C7 1700 aa26■■□□□ 1.75
FOXN3-214ENST00000557258 BRD4O60885 1362 aaPredicted RBP26■■□□□ 1.75
FOXN3-214ENST00000557258 NLRP13Q86W25 1043 aa26■■□□□ 1.75
FOXN3-214ENST00000557258 PTPRTO14522 1441 aa25.99■■□□□ 1.75
FOXN3-214ENST00000557258 NUDCQ9Y266 331 aa25.99■■□□□ 1.75
FOXN3-214ENST00000557258 CD109Q6YHK3 1445 aa25.99■■□□□ 1.75
FOXN3-214ENST00000557258 ADGRF5Q8IZF2 1346 aa25.99■■□□□ 1.75
FOXN3-214ENST00000557258 MADDQ8WXG6 1647 aa25.98■■□□□ 1.75
FOXN3-214ENST00000557258 PARD3Q8TEW0 1356 aa25.98■■□□□ 1.75
FOXN3-214ENST00000557258 DEPDC5O75140 1603 aa25.97■■□□□ 1.75
FOXN3-214ENST00000557258 RBM19Q9Y4C8 960 aaKnown RBP25.97■■□□□ 1.75
FOXN3-214ENST00000557258 CFAP65Q6ZU64 1925 aaKnown RBP25.95■■□□□ 1.75
FOXN3-214ENST00000557258 PPP4R2Q9NY27 417 aa25.95■■□□□ 1.75
FOXN3-214ENST00000557258 TET3O43151 1660 aa25.95■■□□□ 1.75
FOXN3-214ENST00000557258 SMG6Q86US8 1419 aaKnown RBP25.95■■□□□ 1.74
FOXN3-214ENST00000557258 KIDINS220Q9ULH0 1771 aa25.95■■□□□ 1.74
FOXN3-214ENST00000557258 LRPPRCP42704 1394 aaKnown RBP25.94■■□□□ 1.74
FOXN3-214ENST00000557258 MROH1Q8NDA8 1641 aa25.94■■□□□ 1.74
FOXN3-214ENST00000557258 NUTM2DQ5VT03 806 aaPredicted RBP25.93■■□□□ 1.74
FOXN3-214ENST00000557258 RNF17Q9BXT8 1623 aaKnown RBP25.92■■□□□ 1.74
FOXN3-214ENST00000557258 ZNF518AQ6AHZ1 1483 aa25.92■■□□□ 1.74
FOXN3-214ENST00000557258 CEP152O94986 1710 aa25.91■■□□□ 1.74
FOXN3-214ENST00000557258 LAMC1P11047 1609 aa25.91■■□□□ 1.74
FOXN3-214ENST00000557258 VWDEQ8N2E2 1590 aa25.89■■□□□ 1.74
FOXN3-214ENST00000557258 KNSTRNQ9Y448 316 aa25.88■■□□□ 1.73
FOXN3-214ENST00000557258 CDCA7LQ96GN5 454 aa25.88■■□□□ 1.73
FOXN3-214ENST00000557258 SCAF11Q99590 1463 aaKnown RBP25.87■■□□□ 1.73
FOXN3-214ENST00000557258 CYB5RLQ6IPT4 315 aa25.86■■□□□ 1.73
FOXN3-214ENST00000557258 MYT1Q01538 1121 aa25.86■■□□□ 1.73
FOXN3-214ENST00000557258 WASHC2CQ9Y4E1 1318 aa25.85■■□□□ 1.73
FOXN3-214ENST00000557258 PPRC1Q5VV67 1664 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms