RNA–Protein interactions for RNA: ENST00000557087.5

PSMA3-211, Transcript of proteasome subunit alpha 3, humanhuman

TSL 3

Gene PSMA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-211ENST00000557087 AMER1Q5JTC6 1135 aaPredicted RBP11.55□□□□□ -0.56
PSMA3-211ENST00000557087 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
PSMA3-211ENST00000557087 DDX12PQ92771 950 aa11.53□□□□□ -0.56
PSMA3-211ENST00000557087 WNT2BQ93097 391 aa11.53□□□□□ -0.56
PSMA3-211ENST00000557087 RABGEF1Q9UJ41 708 aa11.52□□□□□ -0.57
PSMA3-211ENST00000557087 EPAS1Q99814 870 aa11.51□□□□□ -0.57
PSMA3-211ENST00000557087 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
PSMA3-211ENST00000557087 KIAA1468Q9P260 1216 aa11.5□□□□□ -0.57
PSMA3-211ENST00000557087 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
PSMA3-211ENST00000557087 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
PSMA3-211ENST00000557087 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
PSMA3-211ENST00000557087 PRIM1P49642 420 aaKnown RBP11.48□□□□□ -0.57
PSMA3-211ENST00000557087 PDIA6Q15084 440 aa11.48□□□□□ -0.57
PSMA3-211ENST00000557087 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
PSMA3-211ENST00000557087 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
PSMA3-211ENST00000557087 TSR1Q2NL82 804 aaKnown RBP11.45□□□□□ -0.58
PSMA3-211ENST00000557087 ONECUT3O60422 494 aaPredicted RBP11.44□□□□□ -0.58
PSMA3-211ENST00000557087 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
PSMA3-211ENST00000557087 BCAMP50895 628 aa11.43□□□□□ -0.58
PSMA3-211ENST00000557087 E2F4Q16254 413 aa11.43□□□□□ -0.58
PSMA3-211ENST00000557087 SEPT9Q9UHD8 586 aaPredicted RBP11.43□□□□□ -0.58
PSMA3-211ENST00000557087 ARIH1Q9Y4X5 557 aaPredicted RBP11.43□□□□□ -0.58
PSMA3-211ENST00000557087 EN1Q05925 392 aaPredicted RBP11.42□□□□□ -0.58
PSMA3-211ENST00000557087 NBR1Q14596 966 aa11.42□□□□□ -0.58
PSMA3-211ENST00000557087 LAPTM4BQ86VI4 370 aa11.42□□□□□ -0.58
PSMA3-211ENST00000557087 IFFO2Q5TF58 517 aa11.41□□□□□ -0.58
PSMA3-211ENST00000557087 ZFRQ96KR1 1074 aaKnown RBP11.41□□□□□ -0.58
PSMA3-211ENST00000557087 SPDYE16A6NNV3 312 aaPredicted RBP11.4□□□□□ -0.58
PSMA3-211ENST00000557087 TSKSQ9UJT2 592 aa11.4□□□□□ -0.58
PSMA3-211ENST00000557087 SOWAHBA6NEL2 793 aa11.39□□□□□ -0.59
PSMA3-211ENST00000557087 ANKK1Q8NFD2 765 aa11.39□□□□□ -0.59
PSMA3-211ENST00000557087 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
PSMA3-211ENST00000557087 C3orf80F5H4A9 247 aa11.37□□□□□ -0.59
PSMA3-211ENST00000557087 MAP3K7O43318 606 aa11.37□□□□□ -0.59
PSMA3-211ENST00000557087 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
PSMA3-211ENST00000557087 GRXCR2A6NFK2 248 aa11.34□□□□□ -0.59
PSMA3-211ENST00000557087 OSBPP22059 807 aa11.34□□□□□ -0.59
PSMA3-211ENST00000557087 FAM98CQ17RN3 349 aaKnown RBP11.34□□□□□ -0.59
PSMA3-211ENST00000557087 A0A0G2JS52 829 aa11.33□□□□□ -0.6
PSMA3-211ENST00000557087 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
PSMA3-211ENST00000557087 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
PSMA3-211ENST00000557087 CDCA7LQ96GN5 454 aa11.31□□□□□ -0.6
PSMA3-211ENST00000557087 CDHR5Q9HBB8 845 aa11.31□□□□□ -0.6
PSMA3-211ENST00000557087 SMAPO00193 183 aa11.3□□□□□ -0.6
PSMA3-211ENST00000557087 PRSS12P56730 875 aa11.3□□□□□ -0.6
PSMA3-211ENST00000557087 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
PSMA3-211ENST00000557087 PACS2Q86VP3 889 aa11.28□□□□□ -0.6
PSMA3-211ENST00000557087 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
PSMA3-211ENST00000557087 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
PSMA3-211ENST00000557087 TSR3Q9UJK0 312 aaKnown RBP11.25□□□□□ -0.61
PSMA3-211ENST00000557087 HPS5Q9UPZ3 1129 aa11.25□□□□□ -0.61
PSMA3-211ENST00000557087 RGS20O76081 388 aa11.24□□□□□ -0.61
PSMA3-211ENST00000557087 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
PSMA3-211ENST00000557087 LRCH3Q96II8 777 aa11.24□□□□□ -0.61
PSMA3-211ENST00000557087 TATDN2Q93075 761 aa11.23□□□□□ -0.61
PSMA3-211ENST00000557087 CERKQ8TCT0 537 aa11.22□□□□□ -0.61
PSMA3-211ENST00000557087 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
PSMA3-211ENST00000557087 TTC13Q8NBP0 860 aa11.21□□□□□ -0.61
PSMA3-211ENST00000557087 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
PSMA3-211ENST00000557087 PNMA3Q9UL41 463 aa11.19□□□□□ -0.62
PSMA3-211ENST00000557087 NUDT18Q6ZVK8 323 aa11.18□□□□□ -0.62
PSMA3-211ENST00000557087 KCNV2Q8TDN2 545 aa11.18□□□□□ -0.62
PSMA3-211ENST00000557087 KCNC4Q03721 635 aa11.17□□□□□ -0.62
PSMA3-211ENST00000557087 PPP4CP60510 307 aa11.16□□□□□ -0.62
PSMA3-211ENST00000557087 RBM27Q9P2N5 1060 aaKnown RBP11.16□□□□□ -0.62
PSMA3-211ENST00000557087 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
PSMA3-211ENST00000557087 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
PSMA3-211ENST00000557087 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
PSMA3-211ENST00000557087 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
PSMA3-211ENST00000557087 EYA1Q99502 592 aa11.1□□□□□ -0.63
PSMA3-211ENST00000557087 IRX2Q9BZI1 471 aaPredicted RBP11.1□□□□□ -0.63
PSMA3-211ENST00000557087 APLP1P51693 650 aa11.09□□□□□ -0.63
PSMA3-211ENST00000557087 MTRQ99707 1265 aa11.08□□□□□ -0.64
PSMA3-211ENST00000557087 SWT1Q5T5J6 900 aaKnown RBP11.07□□□□□ -0.64
PSMA3-211ENST00000557087 ZNF516Q92618 1163 aa11.07□□□□□ -0.64
PSMA3-211ENST00000557087 PTGDRQ13258 359 aa11.05□□□□□ -0.64
PSMA3-211ENST00000557087 RNF40O75150 1001 aa11.02□□□□□ -0.65
PSMA3-211ENST00000557087 IL21Q9HBE4 155 aa11.02□□□□□ -0.65
PSMA3-211ENST00000557087 NKX2-3Q8TAU0 364 aa11.01□□□□□ -0.65
PSMA3-211ENST00000557087 SEMA3EO15041 775 aa11□□□□□ -0.65
PSMA3-211ENST00000557087 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
PSMA3-211ENST00000557087 FAM161AQ3B820 660 aa10.99□□□□□ -0.65
PSMA3-211ENST00000557087 PPP1R18Q6NYC8 613 aa10.99□□□□□ -0.65
PSMA3-211ENST00000557087 ADGRG1Q9Y653 693 aa10.98□□□□□ -0.65
PSMA3-211ENST00000557087 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
PSMA3-211ENST00000557087 COPS2P61201 443 aa10.95□□□□□ -0.66
PSMA3-211ENST00000557087 NUTM2FA1L443 756 aa10.94□□□□□ -0.66
PSMA3-211ENST00000557087 LCE2BO14633 110 aa10.94□□□□□ -0.66
PSMA3-211ENST00000557087 TMEM134Q9H6X4 195 aa10.93□□□□□ -0.66
PSMA3-211ENST00000557087 PRKD2Q9BZL6 878 aa10.92□□□□□ -0.66
PSMA3-211ENST00000557087 RCCD1A6NED2 376 aa10.91□□□□□ -0.66
PSMA3-211ENST00000557087 DNAJB2P25686 324 aa10.91□□□□□ -0.66
PSMA3-211ENST00000557087 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.91□□□□□ -0.66
PSMA3-211ENST00000557087 PLCB2Q00722 1185 aa10.9□□□□□ -0.66
PSMA3-211ENST00000557087 P3H3Q8IVL6 736 aa10.9□□□□□ -0.66
PSMA3-211ENST00000557087 RBM46Q8TBY0 533 aaKnown RBP10.9□□□□□ -0.66
PSMA3-211ENST00000557087 TESPA1A2RU30 521 aaPredicted RBP10.88□□□□□ -0.67
PSMA3-211ENST00000557087 ZPR1O75312 459 aa10.88□□□□□ -0.67
PSMA3-211ENST00000557087 SLC10A3P09131 477 aa10.88□□□□□ -0.67
PSMA3-211ENST00000557087 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms