RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 NLRP13Q86W25 1043 aa20.41■□□□□ 0.86
TMEM55B-207ENST00000557041 MYBBP1AQ9BQG0 1328 aaKnown RBP20.41■□□□□ 0.86
TMEM55B-207ENST00000557041 PLEKHH2Q8IVE3 1493 aa20.41■□□□□ 0.86
TMEM55B-207ENST00000557041 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
TMEM55B-207ENST00000557041 CDCA7LQ96GN5 454 aa20.4■□□□□ 0.86
TMEM55B-207ENST00000557041 ANP32EQ9BTT0 268 aa20.4■□□□□ 0.86
TMEM55B-207ENST00000557041 TEX14Q8IWB6 1497 aa20.4■□□□□ 0.86
TMEM55B-207ENST00000557041 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
TMEM55B-207ENST00000557041 CCDC141Q6ZP82 1450 aa20.37■□□□□ 0.85
TMEM55B-207ENST00000557041 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
TMEM55B-207ENST00000557041 NBR1Q14596 966 aa20.36■□□□□ 0.85
TMEM55B-207ENST00000557041 RCAN3Q9UKA8 241 aa20.35■□□□□ 0.85
TMEM55B-207ENST00000557041 KDM5BQ9UGL1 1544 aa20.35■□□□□ 0.85
TMEM55B-207ENST00000557041 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
TMEM55B-207ENST00000557041 STAG3Q9UJ98 1225 aa20.35■□□□□ 0.85
TMEM55B-207ENST00000557041 GCC2Q8IWJ2 1684 aa20.34■□□□□ 0.85
TMEM55B-207ENST00000557041 STK26Q9P289 416 aa20.33■□□□□ 0.85
TMEM55B-207ENST00000557041 KANK1Q14678 1352 aa20.33■□□□□ 0.84
TMEM55B-207ENST00000557041 SCAPERQ9BY12 1400 aa20.33■□□□□ 0.84
TMEM55B-207ENST00000557041 CANXP27824 592 aaKnown RBP20.32■□□□□ 0.84
TMEM55B-207ENST00000557041 EXOC6Q8TAG9 804 aa20.32■□□□□ 0.84
TMEM55B-207ENST00000557041 SYCP2Q9BX26 1530 aa20.31■□□□□ 0.84
TMEM55B-207ENST00000557041 BCL11AQ9H165 835 aa20.3■□□□□ 0.84
TMEM55B-207ENST00000557041 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
TMEM55B-207ENST00000557041 MLECQ14165 292 aa20.29■□□□□ 0.84
TMEM55B-207ENST00000557041 SPATA31E1Q6ZUB1 1445 aa20.28■□□□□ 0.84
TMEM55B-207ENST00000557041 ANP32AP39687 249 aaKnown RBP20.28■□□□□ 0.84
TMEM55B-207ENST00000557041 CDCA8Q53HL2 280 aa20.28■□□□□ 0.84
TMEM55B-207ENST00000557041 ADAMTS8Q9UP79 889 aa20.27■□□□□ 0.84
TMEM55B-207ENST00000557041 DHX29Q7Z478 1369 aaKnown RBP20.26■□□□□ 0.83
TMEM55B-207ENST00000557041 WASHC2CQ9Y4E1 1318 aa20.26■□□□□ 0.83
TMEM55B-207ENST00000557041 ITSN2Q9NZM3 1697 aa20.25■□□□□ 0.83
TMEM55B-207ENST00000557041 CYB5RLQ6IPT4 315 aa20.25■□□□□ 0.83
TMEM55B-207ENST00000557041 ARID4BQ4LE39 1312 aaPredicted RBP20.24■□□□□ 0.83
TMEM55B-207ENST00000557041 DISP3Q9P2K9 1392 aa20.24■□□□□ 0.83
TMEM55B-207ENST00000557041 TRAPPC8Q9Y2L5 1435 aa20.24■□□□□ 0.83
TMEM55B-207ENST00000557041 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
TMEM55B-207ENST00000557041 RAPGEF3O95398 923 aa20.23■□□□□ 0.83
TMEM55B-207ENST00000557041 OSCARQ8IYS5 282 aa20.22■□□□□ 0.83
TMEM55B-207ENST00000557041 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
TMEM55B-207ENST00000557041 MBD5Q9P267 1494 aa20.21■□□□□ 0.83
TMEM55B-207ENST00000557041 SKAP1Q86WV1 359 aa20.21■□□□□ 0.83
TMEM55B-207ENST00000557041 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
TMEM55B-207ENST00000557041 ADGRL2O95490 1459 aa20.2■□□□□ 0.82
TMEM55B-207ENST00000557041 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
TMEM55B-207ENST00000557041 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
TMEM55B-207ENST00000557041 PPM1GO15355 546 aaPredicted RBP20.19■□□□□ 0.82
TMEM55B-207ENST00000557041 ERICH6BQ5W0A0 696 aa20.19■□□□□ 0.82
TMEM55B-207ENST00000557041 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
TMEM55B-207ENST00000557041 ABCA8O94911 1581 aa20.18■□□□□ 0.82
TMEM55B-207ENST00000557041 BRD4O60885 1362 aaPredicted RBP20.18■□□□□ 0.82
TMEM55B-207ENST00000557041 APAF1O14727 1248 aa20.17■□□□□ 0.82
TMEM55B-207ENST00000557041 TESK2Q96S53 571 aa20.17■□□□□ 0.82
TMEM55B-207ENST00000557041 FRAT1Q92837 279 aaPredicted RBP20.17■□□□□ 0.82
TMEM55B-207ENST00000557041 RGS3P49796 1198 aa20.17■□□□□ 0.82
TMEM55B-207ENST00000557041 MORC1Q86VD1 984 aa20.17■□□□□ 0.82
TMEM55B-207ENST00000557041 ERBINQ96RT1 1412 aa20.15■□□□□ 0.82
TMEM55B-207ENST00000557041 ADGRF5Q8IZF2 1346 aa20.15■□□□□ 0.82
TMEM55B-207ENST00000557041 RALGAPBQ86X10 1494 aa20.14■□□□□ 0.82
TMEM55B-207ENST00000557041 SRPK2P78362 688 aaKnown RBP20.14■□□□□ 0.81
TMEM55B-207ENST00000557041 ZBTB47Q9UFB7 747 aaPredicted RBP20.14■□□□□ 0.81
TMEM55B-207ENST00000557041 MSH5O43196 834 aa20.14■□□□□ 0.81
TMEM55B-207ENST00000557041 PPP2R1AP30153 589 aa20.14■□□□□ 0.81
TMEM55B-207ENST00000557041 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
TMEM55B-207ENST00000557041 CRBNQ96SW2 442 aa20.13■□□□□ 0.81
TMEM55B-207ENST00000557041 SLC12A5Q9H2X9 1139 aa20.12■□□□□ 0.81
TMEM55B-207ENST00000557041 PLCH2O75038 1416 aa20.11■□□□□ 0.81
TMEM55B-207ENST00000557041 U2SURPO15042 1029 aaKnown RBP20.11■□□□□ 0.81
TMEM55B-207ENST00000557041 PER1O15534 1290 aaPredicted RBP20.11■□□□□ 0.81
TMEM55B-207ENST00000557041 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
TMEM55B-207ENST00000557041 POGKQ9P215 609 aa20.11■□□□□ 0.81
TMEM55B-207ENST00000557041 SMG6Q86US8 1419 aaKnown RBP20.09■□□□□ 0.81
TMEM55B-207ENST00000557041 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
TMEM55B-207ENST00000557041 CDC42BPAQ5VT25 1732 aa20.09■□□□□ 0.81
TMEM55B-207ENST00000557041 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.81
TMEM55B-207ENST00000557041 SHANK2Q9UPX8 1470 aa20.08■□□□□ 0.81
TMEM55B-207ENST00000557041 SAMD9LQ8IVG5 1584 aa20.08■□□□□ 0.81
TMEM55B-207ENST00000557041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.07■□□□□ 0.8
TMEM55B-207ENST00000557041 BCL2L13Q9BXK5 485 aa20.07■□□□□ 0.8
TMEM55B-207ENST00000557041 A2MP01023 1474 aa20.07■□□□□ 0.8
TMEM55B-207ENST00000557041 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.07■□□□□ 0.8
TMEM55B-207ENST00000557041 LAS1LQ9Y4W2 734 aaKnown RBP20.06■□□□□ 0.8
TMEM55B-207ENST00000557041 TTC37Q6PGP7 1564 aa20.05■□□□□ 0.8
TMEM55B-207ENST00000557041 PDE3BQ13370 1112 aa20.05■□□□□ 0.8
TMEM55B-207ENST00000557041 C20orf194Q5TEA3 1177 aa20.05■□□□□ 0.8
TMEM55B-207ENST00000557041 FANCAO15360 1455 aa20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 NOP58Q9Y2X3 529 aaKnown RBP20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 UHRF1BP1Q6BDS2 1440 aa20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 BCORL1Q5H9F3 1711 aa20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 ARHGEF12Q9NZN5 1544 aa20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 U2AF1L5P0DN76 240 aaPredicted RBP20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 U2AF1Q01081 240 aaKnown RBP eCLIP20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 CABP2Q9NPB3 220 aa20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 EIF3AQ14152 1382 aaKnown RBP20.04■□□□□ 0.8
TMEM55B-207ENST00000557041 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
TMEM55B-207ENST00000557041 CLUAP1Q96AJ1 413 aa20.03■□□□□ 0.8
TMEM55B-207ENST00000557041 ADGRL1O94910 1474 aa20.02■□□□□ 0.8
TMEM55B-207ENST00000557041 MINK1Q8N4C8 1332 aaPredicted RBP20.02■□□□□ 0.8
TMEM55B-207ENST00000557041 ABCC2Q92887 1545 aa20.02■□□□□ 0.8
TMEM55B-207ENST00000557041 CENPJQ9HC77 1338 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms