RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 ANKK1Q8NFD2 765 aa10.15□□□□□ -0.78
LINC00871-203ENST00000556869 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
LINC00871-203ENST00000556869 BCAMP50895 628 aa10.13□□□□□ -0.79
LINC00871-203ENST00000556869 DPYSL4O14531 572 aa10.12□□□□□ -0.79
LINC00871-203ENST00000556869 RGS20O76081 388 aa10.1□□□□□ -0.79
LINC00871-203ENST00000556869 KIAA1468Q9P260 1216 aa10.1□□□□□ -0.79
LINC00871-203ENST00000556869 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
LINC00871-203ENST00000556869 SEPT9Q9UHD8 586 aaPredicted RBP10.09□□□□□ -0.79
LINC00871-203ENST00000556869 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
LINC00871-203ENST00000556869 C6orf132Q5T0Z8 1188 aa10.08□□□□□ -0.8
LINC00871-203ENST00000556869 LAPTM4BQ86VI4 370 aa10.08□□□□□ -0.8
LINC00871-203ENST00000556869 RBM33Q96EV2 1170 aaKnown RBP10.08□□□□□ -0.8
LINC00871-203ENST00000556869 DDX12PQ92771 950 aa10.07□□□□□ -0.8
LINC00871-203ENST00000556869 ZFRQ96KR1 1074 aaKnown RBP10.07□□□□□ -0.8
LINC00871-203ENST00000556869 EPAS1Q99814 870 aa10.07□□□□□ -0.8
LINC00871-203ENST00000556869 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
LINC00871-203ENST00000556869 ITGBL1O95965 494 aaPredicted RBP10.05□□□□□ -0.8
LINC00871-203ENST00000556869 WBP1LQ9NX94 342 aa10.04□□□□□ -0.8
LINC00871-203ENST00000556869 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
LINC00871-203ENST00000556869 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
LINC00871-203ENST00000556869 FAM98CQ17RN3 349 aaKnown RBP10.01□□□□□ -0.81
LINC00871-203ENST00000556869 NBR1Q14596 966 aa10□□□□□ -0.81
LINC00871-203ENST00000556869 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
LINC00871-203ENST00000556869 MAP3K7O43318 606 aa9.98□□□□□ -0.81
LINC00871-203ENST00000556869 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
LINC00871-203ENST00000556869 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
LINC00871-203ENST00000556869 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.98□□□□□ -0.81
LINC00871-203ENST00000556869 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
LINC00871-203ENST00000556869 EN1Q05925 392 aaPredicted RBP9.97□□□□□ -0.81
LINC00871-203ENST00000556869 KCNC4Q03721 635 aa9.96□□□□□ -0.82
LINC00871-203ENST00000556869 BBXQ8WY36 941 aaPredicted RBP9.96□□□□□ -0.82
LINC00871-203ENST00000556869 TSKSQ9UJT2 592 aa9.96□□□□□ -0.82
LINC00871-203ENST00000556869 PDIA6Q15084 440 aa9.95□□□□□ -0.82
LINC00871-203ENST00000556869 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
LINC00871-203ENST00000556869 PACS2Q86VP3 889 aa9.93□□□□□ -0.82
LINC00871-203ENST00000556869 SMAPO00193 183 aa9.91□□□□□ -0.82
LINC00871-203ENST00000556869 SPDYE16A6NNV3 312 aaPredicted RBP9.89□□□□□ -0.83
LINC00871-203ENST00000556869 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
LINC00871-203ENST00000556869 CDCA7LQ96GN5 454 aa9.89□□□□□ -0.83
LINC00871-203ENST00000556869 GRXCR2A6NFK2 248 aa9.88□□□□□ -0.83
LINC00871-203ENST00000556869 Q6ZNB5 142 aa9.88□□□□□ -0.83
LINC00871-203ENST00000556869 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
LINC00871-203ENST00000556869 PPP4CP60510 307 aa9.87□□□□□ -0.83
LINC00871-203ENST00000556869 SAMD7Q7Z3H4 446 aa9.87□□□□□ -0.83
LINC00871-203ENST00000556869 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
LINC00871-203ENST00000556869 C3orf80F5H4A9 247 aa9.86□□□□□ -0.83
LINC00871-203ENST00000556869 PRSS12P56730 875 aa9.86□□□□□ -0.83
LINC00871-203ENST00000556869 E2F4Q16254 413 aa9.86□□□□□ -0.83
LINC00871-203ENST00000556869 CDHR5Q9HBB8 845 aa9.84□□□□□ -0.83
LINC00871-203ENST00000556869 PNMA3Q9UL41 463 aa9.84□□□□□ -0.83
LINC00871-203ENST00000556869 NBPF26B4DH59 902 aa9.83□□□□□ -0.84
LINC00871-203ENST00000556869 RNF40O75150 1001 aa9.83□□□□□ -0.84
LINC00871-203ENST00000556869 CERKQ8TCT0 537 aa9.82□□□□□ -0.84
LINC00871-203ENST00000556869 TATDN2Q93075 761 aa9.82□□□□□ -0.84
LINC00871-203ENST00000556869 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.82□□□□□ -0.84
LINC00871-203ENST00000556869 TJAP1Q5JTD0 557 aa9.81□□□□□ -0.84
LINC00871-203ENST00000556869 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
LINC00871-203ENST00000556869 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
LINC00871-203ENST00000556869 MTRQ99707 1265 aa9.8□□□□□ -0.84
LINC00871-203ENST00000556869 NUDT18Q6ZVK8 323 aa9.79□□□□□ -0.84
LINC00871-203ENST00000556869 ARIH1Q9Y4X5 557 aaPredicted RBP9.79□□□□□ -0.84
LINC00871-203ENST00000556869 OSBPP22059 807 aa9.78□□□□□ -0.84
LINC00871-203ENST00000556869 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
LINC00871-203ENST00000556869 IL21Q9HBE4 155 aa9.77□□□□□ -0.85
LINC00871-203ENST00000556869 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
LINC00871-203ENST00000556869 APLP1P51693 650 aa9.75□□□□□ -0.85
LINC00871-203ENST00000556869 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
LINC00871-203ENST00000556869 ZNF516Q92618 1163 aa9.75□□□□□ -0.85
LINC00871-203ENST00000556869 GFRA3O60609 400 aa9.74□□□□□ -0.85
LINC00871-203ENST00000556869 HDGFP51858 240 aaKnown RBP9.74□□□□□ -0.85
LINC00871-203ENST00000556869 LAPTM4AQ15012 233 aa9.74□□□□□ -0.85
LINC00871-203ENST00000556869 RBM27Q9P2N5 1060 aaKnown RBP9.73□□□□□ -0.85
LINC00871-203ENST00000556869 LCE2BO14633 110 aa9.72□□□□□ -0.85
LINC00871-203ENST00000556869 PADI6Q6TGC4 694 aa9.72□□□□□ -0.85
LINC00871-203ENST00000556869 SWT1Q5T5J6 900 aaKnown RBP9.71□□□□□ -0.86
LINC00871-203ENST00000556869 NKX2-3Q8TAU0 364 aa9.7□□□□□ -0.86
LINC00871-203ENST00000556869 COPS2P61201 443 aa9.69□□□□□ -0.86
LINC00871-203ENST00000556869 NPDC1Q9NQX5 325 aaPredicted RBP9.69□□□□□ -0.86
LINC00871-203ENST00000556869 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.69□□□□□ -0.86
LINC00871-203ENST00000556869 TTC13Q8NBP0 860 aa9.68□□□□□ -0.86
LINC00871-203ENST00000556869 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
LINC00871-203ENST00000556869 SLF2Q8IX21 1173 aa9.67□□□□□ -0.86
LINC00871-203ENST00000556869 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
LINC00871-203ENST00000556869 NRG2O14511 850 aaPredicted RBP9.66□□□□□ -0.86
LINC00871-203ENST00000556869 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.86
LINC00871-203ENST00000556869 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
LINC00871-203ENST00000556869 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
LINC00871-203ENST00000556869 MLLT3P42568 568 aaPredicted RBP9.62□□□□□ -0.87
LINC00871-203ENST00000556869 SLC4A3P48751 1232 aa9.62□□□□□ -0.87
LINC00871-203ENST00000556869 EYA1Q99502 592 aa9.62□□□□□ -0.87
LINC00871-203ENST00000556869 GGCXP38435 758 aa9.61□□□□□ -0.87
LINC00871-203ENST00000556869 ZPR1O75312 459 aa9.6□□□□□ -0.87
LINC00871-203ENST00000556869 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
LINC00871-203ENST00000556869 PCDHB3Q9Y5E6 796 aa9.59□□□□□ -0.87
LINC00871-203ENST00000556869 BLOC1S3Q6QNY0 202 aa9.58□□□□□ -0.88
LINC00871-203ENST00000556869 PRR14Q9BWN1 585 aa9.57□□□□□ -0.88
LINC00871-203ENST00000556869 TLL1O43897 1013 aa9.56□□□□□ -0.88
LINC00871-203ENST00000556869 DNAJB2P25686 324 aa9.55□□□□□ -0.88
LINC00871-203ENST00000556869 PTGDRQ13258 359 aa9.55□□□□□ -0.88
LINC00871-203ENST00000556869 KCNV2Q8TDN2 545 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms