RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 CDC42BPBQ9Y5S2 1711 aa11.38□□□□□ -0.59
PCNX1-213ENST00000556846 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
PCNX1-213ENST00000556846 KDM5CP41229 1560 aa11.37□□□□□ -0.59
PCNX1-213ENST00000556846 ABCC1P33527 1531 aa11.37□□□□□ -0.59
PCNX1-213ENST00000556846 LMTK3Q96Q04 1460 aa11.36□□□□□ -0.59
PCNX1-213ENST00000556846 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
PCNX1-213ENST00000556846 SIGLEC1Q9BZZ2 1709 aa11.35□□□□□ -0.59
PCNX1-213ENST00000556846 POTEGQ6S5H5 508 aa11.35□□□□□ -0.59
PCNX1-213ENST00000556846 PLEKHH2Q8IVE3 1493 aa11.35□□□□□ -0.59
PCNX1-213ENST00000556846 DIP2CQ9Y2E4 1556 aa11.34□□□□□ -0.59
PCNX1-213ENST00000556846 KIAA1107Q9UPP5 1409 aa11.34□□□□□ -0.59
PCNX1-213ENST00000556846 CDC42BPAQ5VT25 1732 aa11.33□□□□□ -0.6
PCNX1-213ENST00000556846 GGT6Q6P531 493 aa11.33□□□□□ -0.6
PCNX1-213ENST00000556846 SYCP2Q9BX26 1530 aa11.33□□□□□ -0.6
PCNX1-213ENST00000556846 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
PCNX1-213ENST00000556846 FER1L4A9Z1Z3 1794 aa11.32□□□□□ -0.6
PCNX1-213ENST00000556846 ITSN2Q9NZM3 1697 aa11.32□□□□□ -0.6
PCNX1-213ENST00000556846 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
PCNX1-213ENST00000556846 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
PCNX1-213ENST00000556846 ABCA6Q8N139 1617 aa11.31□□□□□ -0.6
PCNX1-213ENST00000556846 AGLP35573 1532 aa11.3□□□□□ -0.6
PCNX1-213ENST00000556846 REREQ9P2R6 1566 aa11.3□□□□□ -0.6
PCNX1-213ENST00000556846 RSPH4AQ5TD94 716 aa11.3□□□□□ -0.6
PCNX1-213ENST00000556846 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
PCNX1-213ENST00000556846 FBXO41Q8TF61 875 aa11.3□□□□□ -0.6
PCNX1-213ENST00000556846 UHRF1BP1Q6BDS2 1440 aa11.29□□□□□ -0.6
PCNX1-213ENST00000556846 VPS8Q8N3P4 1428 aa11.29□□□□□ -0.6
PCNX1-213ENST00000556846 TSPY4P0CV99 314 aa11.29□□□□□ -0.6
PCNX1-213ENST00000556846 TSPY10P0CW01 314 aa11.29□□□□□ -0.6
PCNX1-213ENST00000556846 KIDINS220Q9ULH0 1771 aa11.28□□□□□ -0.6
PCNX1-213ENST00000556846 CNTLNQ9NXG0 1405 aa11.28□□□□□ -0.6
PCNX1-213ENST00000556846 A2MP01023 1474 aa11.28□□□□□ -0.6
PCNX1-213ENST00000556846 NCOA2Q15596 1464 aa11.28□□□□□ -0.6
PCNX1-213ENST00000556846 ATP7AQ04656 1500 aa11.28□□□□□ -0.6
PCNX1-213ENST00000556846 ZMYM3Q14202 1370 aa11.28□□□□□ -0.6
PCNX1-213ENST00000556846 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
PCNX1-213ENST00000556846 TIAM1Q13009 1591 aa11.27□□□□□ -0.61
PCNX1-213ENST00000556846 MBD5Q9P267 1494 aa11.25□□□□□ -0.61
PCNX1-213ENST00000556846 KIF3BO15066 747 aa11.25□□□□□ -0.61
PCNX1-213ENST00000556846 RTEL1-TNFRSF6BF6WH68 1400 aa11.25□□□□□ -0.61
PCNX1-213ENST00000556846 LRRC9Q6ZRR7 1453 aa11.25□□□□□ -0.61
PCNX1-213ENST00000556846 CERKQ8TCT0 537 aa11.24□□□□□ -0.61
PCNX1-213ENST00000556846 DHX29Q7Z478 1369 aaKnown RBP11.24□□□□□ -0.61
PCNX1-213ENST00000556846 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
PCNX1-213ENST00000556846 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
PCNX1-213ENST00000556846 CAMSAP2Q08AD1 1489 aa11.23□□□□□ -0.61
PCNX1-213ENST00000556846 CCDC141Q6ZP82 1450 aa11.23□□□□□ -0.61
PCNX1-213ENST00000556846 PREX1Q8TCU6 1659 aa11.22□□□□□ -0.61
PCNX1-213ENST00000556846 OTUD5Q96G74 571 aa11.22□□□□□ -0.61
PCNX1-213ENST00000556846 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
PCNX1-213ENST00000556846 WASHC2CQ9Y4E1 1318 aa11.22□□□□□ -0.61
PCNX1-213ENST00000556846 C3P01024 1663 aa11.2□□□□□ -0.62
PCNX1-213ENST00000556846 NPATQ14207 1427 aa11.2□□□□□ -0.62
PCNX1-213ENST00000556846 NCKAP5LQ9HCH0 1330 aa11.18□□□□□ -0.62
PCNX1-213ENST00000556846 PLXNC1O60486 1568 aa11.18□□□□□ -0.62
PCNX1-213ENST00000556846 MAP3K1Q13233 1512 aa11.18□□□□□ -0.62
PCNX1-213ENST00000556846 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
PCNX1-213ENST00000556846 ADGBQ8N7X0 1667 aa11.17□□□□□ -0.62
PCNX1-213ENST00000556846 FBXO31Q5XUX0 539 aaPredicted RBP11.17□□□□□ -0.62
PCNX1-213ENST00000556846 PTPRKQ15262 1439 aa11.17□□□□□ -0.62
PCNX1-213ENST00000556846 MIA2Q96PC5 1412 aa11.17□□□□□ -0.62
PCNX1-213ENST00000556846 SETD1BQ9UPS6 1966 aaKnown RBP11.16□□□□□ -0.62
PCNX1-213ENST00000556846 CLTCQ00610 1675 aaKnown RBP11.16□□□□□ -0.62
PCNX1-213ENST00000556846 PTPRTO14522 1441 aa11.16□□□□□ -0.62
PCNX1-213ENST00000556846 CLCN6P51797 869 aa11.15□□□□□ -0.62
PCNX1-213ENST00000556846 RRP7BPQ9NSQ0 103 aa11.15□□□□□ -0.62
PCNX1-213ENST00000556846 ARHGEF5Q12774 1597 aa11.15□□□□□ -0.62
PCNX1-213ENST00000556846 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
PCNX1-213ENST00000556846 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
PCNX1-213ENST00000556846 PKD2Q13563 968 aa11.14□□□□□ -0.63
PCNX1-213ENST00000556846 CAMSAP1Q5T5Y3 1602 aa11.13□□□□□ -0.63
PCNX1-213ENST00000556846 NCOA1Q15788 1441 aa11.13□□□□□ -0.63
PCNX1-213ENST00000556846 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
PCNX1-213ENST00000556846 TNRQ92752 1358 aa11.13□□□□□ -0.63
PCNX1-213ENST00000556846 CHIC2Q9UKJ5 165 aa11.12□□□□□ -0.63
PCNX1-213ENST00000556846 STRCQ7RTU9 1775 aa11.11□□□□□ -0.63
PCNX1-213ENST00000556846 FAM50AQ14320 339 aaKnown RBP11.11□□□□□ -0.63
PCNX1-213ENST00000556846 THEMISQ8N1K5 641 aaPredicted RBP11.11□□□□□ -0.63
PCNX1-213ENST00000556846 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
PCNX1-213ENST00000556846 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
PCNX1-213ENST00000556846 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
PCNX1-213ENST00000556846 A2ML1A8K2U0 1454 aa11.09□□□□□ -0.63
PCNX1-213ENST00000556846 ABCC5O15440 1437 aa11.09□□□□□ -0.63
PCNX1-213ENST00000556846 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
PCNX1-213ENST00000556846 CEP170BQ9Y4F5 1589 aaPredicted RBP11.08□□□□□ -0.64
PCNX1-213ENST00000556846 PZPP20742 1482 aa11.08□□□□□ -0.64
PCNX1-213ENST00000556846 KIF15Q9NS87 1388 aa11.08□□□□□ -0.64
PCNX1-213ENST00000556846 FGD6Q6ZV73 1430 aa11.08□□□□□ -0.64
PCNX1-213ENST00000556846 MAST1Q9Y2H9 1570 aa11.07□□□□□ -0.64
PCNX1-213ENST00000556846 PLA2R1Q13018 1463 aa11.07□□□□□ -0.64
PCNX1-213ENST00000556846 ANKRD30AQ9BXX3 1397 aa11.07□□□□□ -0.64
PCNX1-213ENST00000556846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCNX1-213ENST00000556846 MYO3AQ8NEV4 1616 aa11.07□□□□□ -0.64
PCNX1-213ENST00000556846 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
PCNX1-213ENST00000556846 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
PCNX1-213ENST00000556846 DAPK1P53355 1430 aa11.06□□□□□ -0.64
PCNX1-213ENST00000556846 PTPN23Q9H3S7 1636 aa11.06□□□□□ -0.64
PCNX1-213ENST00000556846 KANK1Q14678 1352 aa11.05□□□□□ -0.64
PCNX1-213ENST00000556846 NLRP1Q9C000 1473 aa11.05□□□□□ -0.64
PCNX1-213ENST00000556846 UBAP1LF5GYI3 381 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms