RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 DHX29Q7Z478 1369 aaKnown RBP35.34■■■■□ 3.25
PABPN1-207ENST00000556821 NPATQ14207 1427 aa35.33■■■■□ 3.25
PABPN1-207ENST00000556821 ZNF335Q9H4Z2 1342 aaPredicted RBP35.32■■■■□ 3.25
PABPN1-207ENST00000556821 NCKAP5LQ9HCH0 1330 aa35.32■■■■□ 3.24
PABPN1-207ENST00000556821 UBAP1LF5GYI3 381 aa35.31■■■■□ 3.24
PABPN1-207ENST00000556821 SHANK2Q9UPX8 1470 aa35.29■■■■□ 3.24
PABPN1-207ENST00000556821 TSPY4P0CV99 314 aa35.29■■■■□ 3.24
PABPN1-207ENST00000556821 TSPY10P0CW01 314 aa35.29■■■■□ 3.24
PABPN1-207ENST00000556821 ZMYM3Q14202 1370 aa35.28■■■■□ 3.24
PABPN1-207ENST00000556821 ABCC5O15440 1437 aa35.27■■■■□ 3.24
PABPN1-207ENST00000556821 CAMSAP1Q5T5Y3 1602 aa35.27■■■■□ 3.24
PABPN1-207ENST00000556821 EIF2AK4Q9P2K8 1649 aaKnown RBP35.27■■■■□ 3.24
PABPN1-207ENST00000556821 RNF17Q9BXT8 1623 aaKnown RBP35.25■■■■□ 3.23
PABPN1-207ENST00000556821 DAPK1P53355 1430 aa35.24■■■■□ 3.23
PABPN1-207ENST00000556821 PKD2Q13563 968 aa35.23■■■■□ 3.23
PABPN1-207ENST00000556821 GGT6Q6P531 493 aa35.21■■■■□ 3.23
PABPN1-207ENST00000556821 FAM135AQ9P2D6 1515 aa35.18■■■■□ 3.22
PABPN1-207ENST00000556821 MROH1Q8NDA8 1641 aa35.17■■■■□ 3.22
PABPN1-207ENST00000556821 DUOX2Q9NRD8 1548 aa35.16■■■■□ 3.22
PABPN1-207ENST00000556821 PLA2R1Q13018 1463 aa35.16■■■■□ 3.22
PABPN1-207ENST00000556821 KIF3BO15066 747 aa35.16■■■■□ 3.22
PABPN1-207ENST00000556821 KDM5DQ9BY66 1539 aa35.15■■■■□ 3.22
PABPN1-207ENST00000556821 ZC3H13Q5T200 1668 aaKnown RBP35.12■■■■□ 3.21
PABPN1-207ENST00000556821 PPP6R1Q9UPN7 881 aa35.12■■■■□ 3.21
PABPN1-207ENST00000556821 CEP152O94986 1710 aa35.11■■■■□ 3.21
PABPN1-207ENST00000556821 MYO3AQ8NEV4 1616 aa35.1■■■■□ 3.21
PABPN1-207ENST00000556821 ZNF142P52746 1687 aaPredicted RBP35.09■■■■□ 3.21
PABPN1-207ENST00000556821 PTPRKQ15262 1439 aa35.08■■■■□ 3.21
PABPN1-207ENST00000556821 KIF15Q9NS87 1388 aa35.07■■■■□ 3.2
PABPN1-207ENST00000556821 HSPA1LP34931 641 aa35.06■■■■□ 3.2
PABPN1-207ENST00000556821 DEPDC5O75140 1603 aa35.06■■■■□ 3.2
PABPN1-207ENST00000556821 ADGRL2O95490 1459 aa35.03■■■■□ 3.2
PABPN1-207ENST00000556821 ERBINQ96RT1 1412 aa35.03■■■■□ 3.2
PABPN1-207ENST00000556821 ABCC3O15438 1527 aa35.02■■■■□ 3.2
PABPN1-207ENST00000556821 FAM50AQ14320 339 aaKnown RBP35.01■■■■□ 3.2
PABPN1-207ENST00000556821 PPARGC1BQ86YN6 1023 aaKnown RBP35.01■■■■□ 3.2
PABPN1-207ENST00000556821 PRDM15P57071 1507 aaPredicted RBP35.01■■■■□ 3.19
PABPN1-207ENST00000556821 CFAP65Q6ZU64 1925 aaKnown RBP35■■■■□ 3.19
PABPN1-207ENST00000556821 PZPP20742 1482 aa34.98■■■■□ 3.19
PABPN1-207ENST00000556821 RRP7BPQ9NSQ0 103 aa34.97■■■■□ 3.19
PABPN1-207ENST00000556821 ANKRD30AQ9BXX3 1397 aa34.97■■■■□ 3.19
PABPN1-207ENST00000556821 CEP170BQ9Y4F5 1589 aaPredicted RBP34.96■■■■□ 3.19
PABPN1-207ENST00000556821 CHIC2Q9UKJ5 165 aa34.96■■■■□ 3.19
PABPN1-207ENST00000556821 WASHC2CQ9Y4E1 1318 aa34.93■■■■□ 3.18
PABPN1-207ENST00000556821 MED1Q15648 1581 aaPredicted RBP34.92■■■■□ 3.18
PABPN1-207ENST00000556821 TOM1O60784 492 aa34.92■■■■□ 3.18
PABPN1-207ENST00000556821 PIP4K2BP78356 416 aa34.89■■■■□ 3.18
PABPN1-207ENST00000556821 A2ML1A8K2U0 1454 aa34.86■■■■□ 3.17
PABPN1-207ENST00000556821 VWDEQ8N2E2 1590 aa34.85■■■■□ 3.17
PABPN1-207ENST00000556821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.84■■■■□ 3.171e-10■□□□□ 11
PABPN1-207ENST00000556821 FBXO31Q5XUX0 539 aaPredicted RBP34.83■■■■□ 3.17
PABPN1-207ENST00000556821 SCAF1Q9H7N4 1312 aaKnown RBP34.81■■■■□ 3.16
PABPN1-207ENST00000556821 CPS1P31327 1500 aa34.81■■■■□ 3.16
PABPN1-207ENST00000556821 TNRQ92752 1358 aa34.8■■■■□ 3.16
PABPN1-207ENST00000556821 RRBP1Q9P2E9 1410 aaKnown RBP34.79■■■■□ 3.16
PABPN1-207ENST00000556821 ANKRD50Q9ULJ7 1429 aa34.77■■■■□ 3.16
PABPN1-207ENST00000556821 ERVK-7P63135 1459 aa34.77■■■■□ 3.16
PABPN1-207ENST00000556821 POLR1AO95602 1720 aaPredicted RBP34.76■■■■□ 3.16
PABPN1-207ENST00000556821 UNC13BO14795 1591 aa34.76■■■■□ 3.16
PABPN1-207ENST00000556821 LMTK2Q8IWU2 1503 aa34.75■■■■□ 3.15
PABPN1-207ENST00000556821 ROCK1Q13464 1354 aa34.74■■■■□ 3.15
PABPN1-207ENST00000556821 NEURL4Q96JN8 1562 aa34.72■■■■□ 3.15
PABPN1-207ENST00000556821 ARHGAP31Q2M1Z3 1444 aa34.72■■■■□ 3.15
PABPN1-207ENST00000556821 NLRP1Q9C000 1473 aa34.71■■■■□ 3.15
PABPN1-207ENST00000556821 ALKQ9UM73 1620 aa34.7■■■■□ 3.15
PABPN1-207ENST00000556821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.69■■■■□ 3.142e-11■□□□□ 10.7
PABPN1-207ENST00000556821 EFCAB6Q5THR3 1501 aa34.69■■■■□ 3.14
PABPN1-207ENST00000556821 KANK1Q14678 1352 aa34.68■■■■□ 3.14
PABPN1-207ENST00000556821 GCC2Q8IWJ2 1684 aa34.68■■■■□ 3.14
PABPN1-207ENST00000556821 ANKLE2Q86XL3 938 aa34.67■■■■□ 3.14
PABPN1-207ENST00000556821 PHF23Q9BUL5 403 aaPredicted RBP34.67■■■■□ 3.14
PABPN1-207ENST00000556821 UBR1Q8IWV7 1749 aa34.67■■■■□ 3.14
PABPN1-207ENST00000556821 TET3O43151 1660 aa34.66■■■■□ 3.14
PABPN1-207ENST00000556821 ITGAEP38570 1179 aa34.64■■■■□ 3.14
PABPN1-207ENST00000556821 UGGT1Q9NYU2 1555 aa34.64■■■■□ 3.14
PABPN1-207ENST00000556821 THEMISQ8N1K5 641 aaPredicted RBP34.61■■■■□ 3.13
PABPN1-207ENST00000556821 IQGAP3Q86VI3 1631 aa34.61■■■■□ 3.13
PABPN1-207ENST00000556821 MED14O60244 1454 aa34.6■■■■□ 3.13
PABPN1-207ENST00000556821 SYNMO15061 1565 aa34.58■■■■□ 3.13
PABPN1-207ENST00000556821 PIK3C2BO00750 1634 aa34.58■■■■□ 3.13
PABPN1-207ENST00000556821 RGS17Q9UGC6 210 aaPredicted RBP34.56■■■■□ 3.12
PABPN1-207ENST00000556821 E9PCH4 1651 aa34.56■■■■□ 3.12
PABPN1-207ENST00000556821 NPHP4O75161 1426 aaPredicted RBP34.55■■■■□ 3.12
PABPN1-207ENST00000556821 KDM5AP29375 1690 aaKnown RBP34.53■■■■□ 3.12
PABPN1-207ENST00000556821 NOS1P29475 1434 aa34.49■■■■□ 3.11
PABPN1-207ENST00000556821 RPRD2Q5VT52 1461 aaKnown RBP34.49■■■■□ 3.11
PABPN1-207ENST00000556821 MYO5BQ9ULV0 1848 aa34.48■■■■□ 3.11
PABPN1-207ENST00000556821 LRRC7Q96NW7 1537 aa34.47■■■■□ 3.11
PABPN1-207ENST00000556821 IQGAP1P46940 1657 aa34.44■■■■□ 3.1
PABPN1-207ENST00000556821 NAIPQ13075 1403 aa34.43■■■■□ 3.1
PABPN1-207ENST00000556821 SLIT1O75093 1534 aa34.39■■■■□ 3.1
PABPN1-207ENST00000556821 ARHGAP23Q9P227 1491 aa34.39■■■■□ 3.1
PABPN1-207ENST00000556821 ADGRB3O60242 1522 aa34.37■■■■□ 3.09
PABPN1-207ENST00000556821 SENP3Q9H4L4 574 aaPredicted RBP34.36■■■■□ 3.09
PABPN1-207ENST00000556821 NUP155O75694 1391 aa34.36■■■■□ 3.09
PABPN1-207ENST00000556821 HFM1A2PYH4 1435 aa34.35■■■■□ 3.09
PABPN1-207ENST00000556821 SPHKAPQ2M3C7 1700 aa34.35■■■■□ 3.09
PABPN1-207ENST00000556821 IDI1Q13907 227 aa34.31■■■■□ 3.08
PABPN1-207ENST00000556821 SCAF11Q99590 1463 aaKnown RBP34.3■■■■□ 3.08
PABPN1-207ENST00000556821 STRCP1A6NGW2 1772 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms