RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 ABCC5O15440 1437 aa16.68■□□□□ 0.26
XRCC3-216ENST00000556682 RRP7BPQ9NSQ0 103 aa16.67■□□□□ 0.26
XRCC3-216ENST00000556682 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
XRCC3-216ENST00000556682 KDM5DQ9BY66 1539 aa16.66■□□□□ 0.26
XRCC3-216ENST00000556682 DAPK1P53355 1430 aa16.66■□□□□ 0.26
XRCC3-216ENST00000556682 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
XRCC3-216ENST00000556682 FBXO41Q8TF61 875 aa16.66■□□□□ 0.26
XRCC3-216ENST00000556682 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
XRCC3-216ENST00000556682 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
XRCC3-216ENST00000556682 DUOX2Q9NRD8 1548 aa16.65■□□□□ 0.26
XRCC3-216ENST00000556682 FBXO31Q5XUX0 539 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-216ENST00000556682 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
XRCC3-216ENST00000556682 TNRQ92752 1358 aa16.64■□□□□ 0.25
XRCC3-216ENST00000556682 ANKRD30AQ9BXX3 1397 aa16.64■□□□□ 0.25
XRCC3-216ENST00000556682 PZPP20742 1482 aa16.63■□□□□ 0.25
XRCC3-216ENST00000556682 PKD2Q13563 968 aa16.63■□□□□ 0.25
XRCC3-216ENST00000556682 PTPRTO14522 1441 aa16.62■□□□□ 0.25
XRCC3-216ENST00000556682 CERKQ8TCT0 537 aa16.62■□□□□ 0.25
XRCC3-216ENST00000556682 NCOA1Q15788 1441 aa16.62■□□□□ 0.25
XRCC3-216ENST00000556682 ERBINQ96RT1 1412 aa16.61■□□□□ 0.25
XRCC3-216ENST00000556682 DNMT1P26358 1616 aaKnown RBP16.6■□□□□ 0.25
XRCC3-216ENST00000556682 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
XRCC3-216ENST00000556682 CAMSAP1Q5T5Y3 1602 aa16.59■□□□□ 0.25
XRCC3-216ENST00000556682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.59■□□□□ 0.25
XRCC3-216ENST00000556682 A2ML1A8K2U0 1454 aa16.59■□□□□ 0.25
XRCC3-216ENST00000556682 CEP170BQ9Y4F5 1589 aaPredicted RBP16.59■□□□□ 0.25
XRCC3-216ENST00000556682 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
XRCC3-216ENST00000556682 NCKAP5LQ9HCH0 1330 aa16.58■□□□□ 0.24
XRCC3-216ENST00000556682 KANK1Q14678 1352 aa16.58■□□□□ 0.24
XRCC3-216ENST00000556682 PLA2R1Q13018 1463 aa16.58■□□□□ 0.24
XRCC3-216ENST00000556682 STRCQ7RTU9 1775 aa16.58■□□□□ 0.24
XRCC3-216ENST00000556682 MYO3AQ8NEV4 1616 aa16.57■□□□□ 0.24
XRCC3-216ENST00000556682 THEMISQ8N1K5 641 aaPredicted RBP16.57■□□□□ 0.24
XRCC3-216ENST00000556682 ABCC3O15438 1527 aa16.56■□□□□ 0.24
XRCC3-216ENST00000556682 CROCC2H7BZ55 1655 aa16.55■□□□□ 0.24
XRCC3-216ENST00000556682 NLRP1Q9C000 1473 aa16.54■□□□□ 0.24
XRCC3-216ENST00000556682 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
XRCC3-216ENST00000556682 ZC3H13Q5T200 1668 aaKnown RBP16.54■□□□□ 0.24
XRCC3-216ENST00000556682 ANKLE2Q86XL3 938 aa16.53■□□□□ 0.24
XRCC3-216ENST00000556682 ADGRL2O95490 1459 aa16.53■□□□□ 0.24
XRCC3-216ENST00000556682 PPARGC1BQ86YN6 1023 aaKnown RBP16.52■□□□□ 0.24
XRCC3-216ENST00000556682 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
XRCC3-216ENST00000556682 MROH1Q8NDA8 1641 aa16.5■□□□□ 0.23
XRCC3-216ENST00000556682 ANKRD50Q9ULJ7 1429 aa16.5■□□□□ 0.23
XRCC3-216ENST00000556682 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
XRCC3-216ENST00000556682 ERVK-7P63135 1459 aa16.49■□□□□ 0.23
XRCC3-216ENST00000556682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.49■□□□□ 0.233e-6■■■■□ 21.3
XRCC3-216ENST00000556682 SPATA31D1Q6ZQQ2 1576 aa16.48■□□□□ 0.23
XRCC3-216ENST00000556682 UGGT1Q9NYU2 1555 aa16.48■□□□□ 0.23
XRCC3-216ENST00000556682 ITGAEP38570 1179 aa16.47■□□□□ 0.23
XRCC3-216ENST00000556682 ROCK1Q13464 1354 aa16.46■□□□□ 0.23
XRCC3-216ENST00000556682 STAG3Q9UJ98 1225 aa16.45■□□□□ 0.22
XRCC3-216ENST00000556682 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
XRCC3-216ENST00000556682 CEP152O94986 1710 aa16.44■□□□□ 0.22
XRCC3-216ENST00000556682 DEPDC5O75140 1603 aa16.44■□□□□ 0.22
XRCC3-216ENST00000556682 LMTK2Q8IWU2 1503 aa16.44■□□□□ 0.22
XRCC3-216ENST00000556682 LTBP4Q8N2S1 1624 aa16.42■□□□□ 0.22
XRCC3-216ENST00000556682 SLC52A1Q9NWF4 448 aa16.41■□□□□ 0.22
XRCC3-216ENST00000556682 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
XRCC3-216ENST00000556682 IQSEC2Q5JU85 1478 aa16.41■□□□□ 0.22
XRCC3-216ENST00000556682 VWDEQ8N2E2 1590 aa16.4■□□□□ 0.22
XRCC3-216ENST00000556682 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
XRCC3-216ENST00000556682 IDI1Q13907 227 aa16.39■□□□□ 0.21
XRCC3-216ENST00000556682 TXNDC2Q86VQ3 553 aa16.39■□□□□ 0.21
XRCC3-216ENST00000556682 MED14O60244 1454 aa16.39■□□□□ 0.21
XRCC3-216ENST00000556682 RPRD2Q5VT52 1461 aaKnown RBP16.37■□□□□ 0.21
XRCC3-216ENST00000556682 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
XRCC3-216ENST00000556682 NEURL4Q96JN8 1562 aa16.36■□□□□ 0.21
XRCC3-216ENST00000556682 NOS1P29475 1434 aa16.36■□□□□ 0.21
XRCC3-216ENST00000556682 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
XRCC3-216ENST00000556682 EFCAB6Q5THR3 1501 aa16.35■□□□□ 0.21
XRCC3-216ENST00000556682 POLR1AO95602 1720 aaPredicted RBP16.35■□□□□ 0.21
XRCC3-216ENST00000556682 NUP155O75694 1391 aa16.35■□□□□ 0.21
XRCC3-216ENST00000556682 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
XRCC3-216ENST00000556682 LTKP29376 864 aa16.34■□□□□ 0.21
XRCC3-216ENST00000556682 TMEM2Q9UHN6 1383 aa16.34■□□□□ 0.21
XRCC3-216ENST00000556682 UBAP1LF5GYI3 381 aa16.33■□□□□ 0.2
XRCC3-216ENST00000556682 HDGFP51858 240 aaKnown RBP16.33■□□□□ 0.2
XRCC3-216ENST00000556682 SLIT1O75093 1534 aa16.32■□□□□ 0.2
XRCC3-216ENST00000556682 CPS1P31327 1500 aa16.32■□□□□ 0.2
XRCC3-216ENST00000556682 UBR1Q8IWV7 1749 aa16.32■□□□□ 0.2
XRCC3-216ENST00000556682 ARHGAP23Q9P227 1491 aa16.32■□□□□ 0.2
XRCC3-216ENST00000556682 UNC13BO14795 1591 aa16.3■□□□□ 0.2
XRCC3-216ENST00000556682 TOM1O60784 492 aa16.29■□□□□ 0.2
XRCC3-216ENST00000556682 TET3O43151 1660 aa16.29■□□□□ 0.2
XRCC3-216ENST00000556682 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
XRCC3-216ENST00000556682 PIK3C2BO00750 1634 aa16.29■□□□□ 0.2
XRCC3-216ENST00000556682 BCANQ96GW7 911 aa16.28■□□□□ 0.2
XRCC3-216ENST00000556682 SYNMO15061 1565 aa16.28■□□□□ 0.2
XRCC3-216ENST00000556682 CHGAP10645 457 aaKnown RBP16.27■□□□□ 0.2
XRCC3-216ENST00000556682 KDM5AP29375 1690 aaKnown RBP16.27■□□□□ 0.19
XRCC3-216ENST00000556682 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
XRCC3-216ENST00000556682 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
XRCC3-216ENST00000556682 ADGRB3O60242 1522 aa16.24■□□□□ 0.19
XRCC3-216ENST00000556682 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
XRCC3-216ENST00000556682 GCC2Q8IWJ2 1684 aa16.24■□□□□ 0.19
XRCC3-216ENST00000556682 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
XRCC3-216ENST00000556682 NAIPQ13075 1403 aa16.23■□□□□ 0.19
XRCC3-216ENST00000556682 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
XRCC3-216ENST00000556682 PIP4K2BP78356 416 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms