RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
MTHFD1-213ENST00000556284 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
MTHFD1-213ENST00000556284 POLA2Q14181 598 aa15.06■□□□□ 0
MTHFD1-213ENST00000556284 RRP7BPQ9NSQ0 103 aa15.06■□□□□ 0
MTHFD1-213ENST00000556284 FRMPD1Q5SYB0 1578 aa15.06■□□□□ 0
MTHFD1-213ENST00000556284 ATP7AQ04656 1500 aa15.05■□□□□ -0
MTHFD1-213ENST00000556284 KDM6BO15054 1643 aa15.05■□□□□ -0
MTHFD1-213ENST00000556284 ZFYVE16Q7Z3T8 1539 aa15.04■□□□□ -0
MTHFD1-213ENST00000556284 HFM1A2PYH4 1435 aa15.04■□□□□ -0
MTHFD1-213ENST00000556284 KIF15Q9NS87 1388 aa15.04■□□□□ -0
MTHFD1-213ENST00000556284 HECW2Q9P2P5 1572 aa15.03■□□□□ -0
MTHFD1-213ENST00000556284 INO80Q9ULG1 1556 aaPredicted RBP15.03■□□□□ -0
MTHFD1-213ENST00000556284 NAIPQ13075 1403 aa15.02■□□□□ -0
MTHFD1-213ENST00000556284 PLXNC1O60486 1568 aa15.02□□□□□ -0.01
MTHFD1-213ENST00000556284 SETD5Q9C0A6 1442 aa15.01□□□□□ -0.01
MTHFD1-213ENST00000556284 DHX29Q7Z478 1369 aaKnown RBP15.01□□□□□ -0.01
MTHFD1-213ENST00000556284 ABCB7O75027 752 aa15.01□□□□□ -0.01
MTHFD1-213ENST00000556284 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
MTHFD1-213ENST00000556284 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
MTHFD1-213ENST00000556284 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
MTHFD1-213ENST00000556284 ACIN1Q9UKV3 1341 aaKnown RBP15□□□□□ -0.01
MTHFD1-213ENST00000556284 HRCP23327 699 aa15□□□□□ -0.01
MTHFD1-213ENST00000556284 DUOX2Q9NRD8 1548 aa14.99□□□□□ -0.01
MTHFD1-213ENST00000556284 ATP10AO60312 1499 aa14.99□□□□□ -0.01
MTHFD1-213ENST00000556284 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
MTHFD1-213ENST00000556284 A2MP01023 1474 aa14.98□□□□□ -0.01
MTHFD1-213ENST00000556284 DSG3P32926 999 aa14.97□□□□□ -0.01
MTHFD1-213ENST00000556284 ERBINQ96RT1 1412 aa14.96□□□□□ -0.01
MTHFD1-213ENST00000556284 DIP2CQ9Y2E4 1556 aa14.96□□□□□ -0.01
MTHFD1-213ENST00000556284 ARHGEF40Q8TER5 1519 aa14.95□□□□□ -0.02
MTHFD1-213ENST00000556284 RAB3GAP2Q9H2M9 1393 aa14.95□□□□□ -0.02
MTHFD1-213ENST00000556284 ABCA6Q8N139 1617 aa14.95□□□□□ -0.02
MTHFD1-213ENST00000556284 REREQ9P2R6 1566 aa14.93□□□□□ -0.02
MTHFD1-213ENST00000556284 GCC2Q8IWJ2 1684 aa14.93□□□□□ -0.02
MTHFD1-213ENST00000556284 KIF3BO15066 747 aa14.92□□□□□ -0.02
MTHFD1-213ENST00000556284 AGLP35573 1532 aa14.91□□□□□ -0.02
MTHFD1-213ENST00000556284 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
MTHFD1-213ENST00000556284 ARID4BQ4LE39 1312 aaPredicted RBP14.88□□□□□ -0.03
MTHFD1-213ENST00000556284 EIF2AK4Q9P2K8 1649 aaKnown RBP14.88□□□□□ -0.03
MTHFD1-213ENST00000556284 ZBTB12Q9Y330 459 aaPredicted RBP14.87□□□□□ -0.03
MTHFD1-213ENST00000556284 GGT6Q6P531 493 aa14.86□□□□□ -0.03
MTHFD1-213ENST00000556284 BCORL1Q5H9F3 1711 aa14.86□□□□□ -0.03
MTHFD1-213ENST00000556284 NUP155O75694 1391 aa14.85□□□□□ -0.03
MTHFD1-213ENST00000556284 KANK1Q14678 1352 aa14.85□□□□□ -0.03
MTHFD1-213ENST00000556284 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
MTHFD1-213ENST00000556284 UNC13BO14795 1591 aa14.81□□□□□ -0.04
MTHFD1-213ENST00000556284 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
MTHFD1-213ENST00000556284 MLECQ14165 292 aa14.81□□□□□ -0.04
MTHFD1-213ENST00000556284 MPHOSPH9Q99550 1183 aa14.81□□□□□ -0.04
MTHFD1-213ENST00000556284 WASHC2CQ9Y4E1 1318 aa14.81□□□□□ -0.04
MTHFD1-213ENST00000556284 KDM5DQ9BY66 1539 aa14.81□□□□□ -0.04
MTHFD1-213ENST00000556284 DEPDC5O75140 1603 aa14.81□□□□□ -0.04
MTHFD1-213ENST00000556284 FKBP8Q14318 412 aa14.8□□□□□ -0.04
MTHFD1-213ENST00000556284 PRDM15P57071 1507 aaPredicted RBP14.8□□□□□ -0.04
MTHFD1-213ENST00000556284 SIGLEC1Q9BZZ2 1709 aa14.79□□□□□ -0.04
MTHFD1-213ENST00000556284 ESF1Q9H501 851 aaKnown RBP14.79□□□□□ -0.04
MTHFD1-213ENST00000556284 MROH1Q8NDA8 1641 aa14.78□□□□□ -0.04
MTHFD1-213ENST00000556284 VWDEQ8N2E2 1590 aa14.78□□□□□ -0.04
MTHFD1-213ENST00000556284 FAM135AQ9P2D6 1515 aa14.78□□□□□ -0.04
MTHFD1-213ENST00000556284 PZPP20742 1482 aa14.78□□□□□ -0.04
MTHFD1-213ENST00000556284 LMTK2Q8IWU2 1503 aa14.76□□□□□ -0.05
MTHFD1-213ENST00000556284 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
MTHFD1-213ENST00000556284 PKD2Q13563 968 aa14.76□□□□□ -0.05
MTHFD1-213ENST00000556284 IQGAP3Q86VI3 1631 aa14.76□□□□□ -0.05
MTHFD1-213ENST00000556284 ABCC3O15438 1527 aa14.75□□□□□ -0.05
MTHFD1-213ENST00000556284 CNTLNQ9NXG0 1405 aa14.75□□□□□ -0.05
MTHFD1-213ENST00000556284 ARHGAP31Q2M1Z3 1444 aa14.73□□□□□ -0.05
MTHFD1-213ENST00000556284 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.05
MTHFD1-213ENST00000556284 ZMYM3Q14202 1370 aa14.71□□□□□ -0.06
MTHFD1-213ENST00000556284 ZC3H13Q5T200 1668 aaKnown RBP14.71□□□□□ -0.06
MTHFD1-213ENST00000556284 CLSPNQ9HAW4 1339 aa14.7□□□□□ -0.06
MTHFD1-213ENST00000556284 TET3O43151 1660 aa14.7□□□□□ -0.06
MTHFD1-213ENST00000556284 RPRD2Q5VT52 1461 aaKnown RBP14.69□□□□□ -0.06
MTHFD1-213ENST00000556284 EFCAB6Q5THR3 1501 aa14.69□□□□□ -0.06
MTHFD1-213ENST00000556284 NPATQ14207 1427 aa14.68□□□□□ -0.06
MTHFD1-213ENST00000556284 ANKRD30BQ9BXX2 1392 aa14.67□□□□□ -0.06
MTHFD1-213ENST00000556284 ADAMTSL3P82987 1691 aa14.67□□□□□ -0.06
MTHFD1-213ENST00000556284 CEP152O94986 1710 aa14.66□□□□□ -0.06
MTHFD1-213ENST00000556284 CAMSAP1Q5T5Y3 1602 aa14.66□□□□□ -0.06
MTHFD1-213ENST00000556284 PTPRTO14522 1441 aa14.66□□□□□ -0.06
MTHFD1-213ENST00000556284 CLTCQ00610 1675 aaKnown RBP14.65□□□□□ -0.06
MTHFD1-213ENST00000556284 E9PCH4 1651 aa14.64□□□□□ -0.07
MTHFD1-213ENST00000556284 MADDQ8WXG6 1647 aa14.63□□□□□ -0.07
MTHFD1-213ENST00000556284 FER1L4A9Z1Z3 1794 aa14.63□□□□□ -0.07
MTHFD1-213ENST00000556284 MROH2AA6NES4 1674 aa14.63□□□□□ -0.07
MTHFD1-213ENST00000556284 FBXO31Q5XUX0 539 aaPredicted RBP14.63□□□□□ -0.07
MTHFD1-213ENST00000556284 NOS1P29475 1434 aa14.63□□□□□ -0.07
MTHFD1-213ENST00000556284 PLA2R1Q13018 1463 aa14.63□□□□□ -0.07
MTHFD1-213ENST00000556284 KDM4FA0A1W2PPD8 638 aa14.62□□□□□ -0.07
MTHFD1-213ENST00000556284 CEBPAP49715 358 aaPredicted RBP14.62□□□□□ -0.07
MTHFD1-213ENST00000556284 SLC52A1Q9NWF4 448 aa14.62□□□□□ -0.07
MTHFD1-213ENST00000556284 SPDYE4A6NLX3 237 aa14.61□□□□□ -0.07
MTHFD1-213ENST00000556284 ERVK-7P63135 1459 aa14.61□□□□□ -0.07
MTHFD1-213ENST00000556284 CCDC144AA2RUR9 1427 aa14.59□□□□□ -0.07
MTHFD1-213ENST00000556284 PTPRMP28827 1452 aa14.59□□□□□ -0.07
MTHFD1-213ENST00000556284 RIMS1Q86UR5 1692 aaKnown RBP14.58□□□□□ -0.07
MTHFD1-213ENST00000556284 TRPM2O94759 1503 aa14.58□□□□□ -0.08
MTHFD1-213ENST00000556284 SIN3AQ96ST3 1273 aa14.58□□□□□ -0.08
MTHFD1-213ENST00000556284 SPATA31D1Q6ZQQ2 1576 aa14.58□□□□□ -0.08
MTHFD1-213ENST00000556284 TNRQ92752 1358 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms