RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CUL7Q14999 1698 aa12.11□□□□□ -0.47
ATXN3-236ENST00000556220 G3V3G9 751 aa12.11□□□□□ -0.47
ATXN3-236ENST00000556220 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
ATXN3-236ENST00000556220 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
ATXN3-236ENST00000556220 SOX12O15370 315 aa12.1□□□□□ -0.47
ATXN3-236ENST00000556220 ST18O60284 1047 aa12.1□□□□□ -0.47
ATXN3-236ENST00000556220 MAGI3Q5TCQ9 1506 aa12.1□□□□□ -0.47
ATXN3-236ENST00000556220 WDR7Q9Y4E6 1490 aa12.09□□□□□ -0.47
ATXN3-236ENST00000556220 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.47
ATXN3-236ENST00000556220 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
ATXN3-236ENST00000556220 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
ATXN3-236ENST00000556220 PTPRMP28827 1452 aa12.06□□□□□ -0.48
ATXN3-236ENST00000556220 ZCCHC11Q5TAX3 1644 aaKnown RBP12.05□□□□□ -0.48
ATXN3-236ENST00000556220 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
ATXN3-236ENST00000556220 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
ATXN3-236ENST00000556220 PKD2Q13563 968 aa12.04□□□□□ -0.48
ATXN3-236ENST00000556220 UGGT2Q9NYU1 1516 aa12.03□□□□□ -0.48
ATXN3-236ENST00000556220 SOCS7O14512 581 aa12.03□□□□□ -0.48
ATXN3-236ENST00000556220 ILDR2Q71H61 639 aa12.01□□□□□ -0.49
ATXN3-236ENST00000556220 CERKQ8TCT0 537 aa12.01□□□□□ -0.49
ATXN3-236ENST00000556220 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
ATXN3-236ENST00000556220 RAPGEF3O95398 923 aa12□□□□□ -0.49
ATXN3-236ENST00000556220 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
ATXN3-236ENST00000556220 PHLDB1Q86UU1 1377 aa12□□□□□ -0.49
ATXN3-236ENST00000556220 ARID4BQ4LE39 1312 aaPredicted RBP11.99□□□□□ -0.49
ATXN3-236ENST00000556220 KIF21BO75037 1637 aa11.99□□□□□ -0.49
ATXN3-236ENST00000556220 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
ATXN3-236ENST00000556220 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
ATXN3-236ENST00000556220 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
ATXN3-236ENST00000556220 KIAA0556O60303 1618 aa11.97□□□□□ -0.49
ATXN3-236ENST00000556220 PCF11O94913 1555 aaKnown RBP11.97□□□□□ -0.49
ATXN3-236ENST00000556220 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
ATXN3-236ENST00000556220 HSPA2P54652 639 aa11.97□□□□□ -0.49
ATXN3-236ENST00000556220 ADAMTSL3P82987 1691 aa11.97□□□□□ -0.49
ATXN3-236ENST00000556220 DISP3Q9P2K9 1392 aa11.96□□□□□ -0.49
ATXN3-236ENST00000556220 STK25O00506 426 aa11.96□□□□□ -0.49
ATXN3-236ENST00000556220 NLRP6P59044 892 aa11.96□□□□□ -0.49
ATXN3-236ENST00000556220 MS4A4AQ96JQ5 239 aa11.96□□□□□ -0.49
ATXN3-236ENST00000556220 RGL2O15211 777 aa11.95□□□□□ -0.5
ATXN3-236ENST00000556220 MICALL2Q8IY33 904 aa11.95□□□□□ -0.5
ATXN3-236ENST00000556220 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
ATXN3-236ENST00000556220 ABCA8O94911 1581 aa11.92□□□□□ -0.5
ATXN3-236ENST00000556220 ARID3CA6NKF2 412 aa11.92□□□□□ -0.5
ATXN3-236ENST00000556220 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
ATXN3-236ENST00000556220 FAM9AQ8IZU1 332 aaPredicted RBP11.91□□□□□ -0.5
ATXN3-236ENST00000556220 FBXO22Q8NEZ5 403 aa11.9□□□□□ -0.5
ATXN3-236ENST00000556220 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
ATXN3-236ENST00000556220 ATP10BO94823 1461 aa11.89□□□□□ -0.51
ATXN3-236ENST00000556220 NEO1Q92859 1461 aa11.89□□□□□ -0.51
ATXN3-236ENST00000556220 MFRPQ9BY79 579 aa11.88□□□□□ -0.51
ATXN3-236ENST00000556220 BCORL1Q5H9F3 1711 aa11.88□□□□□ -0.51
ATXN3-236ENST00000556220 MADDQ8WXG6 1647 aa11.87□□□□□ -0.51
ATXN3-236ENST00000556220 HOXB3P14651 431 aaPredicted RBP11.87□□□□□ -0.51
ATXN3-236ENST00000556220 DOK7Q18PE1 504 aa11.86□□□□□ -0.51
ATXN3-236ENST00000556220 EMP3P54852 163 aa11.85□□□□□ -0.51
ATXN3-236ENST00000556220 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
ATXN3-236ENST00000556220 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
ATXN3-236ENST00000556220 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
ATXN3-236ENST00000556220 POGZQ7Z3K3 1410 aa11.83□□□□□ -0.52
ATXN3-236ENST00000556220 MLECQ14165 292 aa11.82□□□□□ -0.52
ATXN3-236ENST00000556220 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
ATXN3-236ENST00000556220 ABCA9Q8IUA7 1624 aa11.82□□□□□ -0.52
ATXN3-236ENST00000556220 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
ATXN3-236ENST00000556220 FRMPD1Q5SYB0 1578 aa11.8□□□□□ -0.52
ATXN3-236ENST00000556220 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
ATXN3-236ENST00000556220 AKNAQ7Z591 1439 aa11.8□□□□□ -0.52
ATXN3-236ENST00000556220 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
ATXN3-236ENST00000556220 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
ATXN3-236ENST00000556220 RIMS1Q86UR5 1692 aaKnown RBP11.8□□□□□ -0.52
ATXN3-236ENST00000556220 FANCAO15360 1455 aa11.77□□□□□ -0.52
ATXN3-236ENST00000556220 PLEKHD1A6NEE1 506 aa11.77□□□□□ -0.53
ATXN3-236ENST00000556220 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
ATXN3-236ENST00000556220 ARHGEF40Q8TER5 1519 aa11.76□□□□□ -0.53
ATXN3-236ENST00000556220 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
ATXN3-236ENST00000556220 CEBPAP49715 358 aaPredicted RBP11.76□□□□□ -0.53
ATXN3-236ENST00000556220 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
ATXN3-236ENST00000556220 HS6ST3Q8IZP7 471 aa11.75□□□□□ -0.53
ATXN3-236ENST00000556220 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
ATXN3-236ENST00000556220 MAGI2Q86UL8 1455 aa11.74□□□□□ -0.53
ATXN3-236ENST00000556220 CTTNBP2Q8WZ74 1663 aa11.72□□□□□ -0.53
ATXN3-236ENST00000556220 POTEB3A0JP26 581 aa11.72□□□□□ -0.53
ATXN3-236ENST00000556220 POTEBQ6S5H4 581 aa11.72□□□□□ -0.53
ATXN3-236ENST00000556220 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.53
ATXN3-236ENST00000556220 ZFYVE16Q7Z3T8 1539 aa11.7□□□□□ -0.54
ATXN3-236ENST00000556220 PTPRTO14522 1441 aa11.7□□□□□ -0.54
ATXN3-236ENST00000556220 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
ATXN3-236ENST00000556220 RICTORQ6R327 1708 aa11.69□□□□□ -0.54
ATXN3-236ENST00000556220 KIF3CO14782 793 aa11.69□□□□□ -0.54
ATXN3-236ENST00000556220 TTC37Q6PGP7 1564 aa11.69□□□□□ -0.54
ATXN3-236ENST00000556220 ZMYM4Q5VZL5 1548 aa11.69□□□□□ -0.54
ATXN3-236ENST00000556220 NUP153P49790 1475 aaKnown RBP11.69□□□□□ -0.54
ATXN3-236ENST00000556220 ERBB3P21860 1342 aa11.68□□□□□ -0.54
ATXN3-236ENST00000556220 GPR153Q6NV75 609 aa11.68□□□□□ -0.54
ATXN3-236ENST00000556220 ARHGEF12Q9NZN5 1544 aa11.68□□□□□ -0.54
ATXN3-236ENST00000556220 ATP10AO60312 1499 aa11.68□□□□□ -0.54
ATXN3-236ENST00000556220 UHRF1BP1Q6BDS2 1440 aa11.68□□□□□ -0.54
ATXN3-236ENST00000556220 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
ATXN3-236ENST00000556220 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
ATXN3-236ENST00000556220 RAPGEF6Q8TEU7 1601 aa11.67□□□□□ -0.54
ATXN3-236ENST00000556220 SIGLEC1Q9BZZ2 1709 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms