RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
ATXN3-235ENST00000556082 NLRP6P59044 892 aa12.48□□□□□ -0.41
ATXN3-235ENST00000556082 CFAP43Q8NDM7 1665 aa12.48□□□□□ -0.41
ATXN3-235ENST00000556082 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
ATXN3-235ENST00000556082 CCER1Q8TC90 406 aaPredicted RBP12.47□□□□□ -0.41
ATXN3-235ENST00000556082 BCL11BQ9C0K0 894 aaPredicted RBP12.47□□□□□ -0.41
ATXN3-235ENST00000556082 NUP160Q12769 1436 aa12.46□□□□□ -0.41
ATXN3-235ENST00000556082 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
ATXN3-235ENST00000556082 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATXN3-235ENST00000556082 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
ATXN3-235ENST00000556082 STK24Q9Y6E0 443 aa12.44□□□□□ -0.42
ATXN3-235ENST00000556082 STK25O00506 426 aa12.43□□□□□ -0.42
ATXN3-235ENST00000556082 MICALL2Q8IY33 904 aa12.43□□□□□ -0.42
ATXN3-235ENST00000556082 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
ATXN3-235ENST00000556082 CCDC18Q5T9S5 1454 aa12.42□□□□□ -0.42
ATXN3-235ENST00000556082 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
ATXN3-235ENST00000556082 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
ATXN3-235ENST00000556082 PHLDB1Q86UU1 1377 aa12.41□□□□□ -0.42
ATXN3-235ENST00000556082 CEP170Q5SW79 1584 aa12.4□□□□□ -0.42
ATXN3-235ENST00000556082 RGL2O15211 777 aa12.39□□□□□ -0.43
ATXN3-235ENST00000556082 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
ATXN3-235ENST00000556082 JPH4Q96JJ6 628 aa12.39□□□□□ -0.43
ATXN3-235ENST00000556082 KIAA0556O60303 1618 aa12.39□□□□□ -0.43
ATXN3-235ENST00000556082 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
ATXN3-235ENST00000556082 MTUS2Q5JR59 1369 aa12.38□□□□□ -0.43
ATXN3-235ENST00000556082 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
ATXN3-235ENST00000556082 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
ATXN3-235ENST00000556082 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
ATXN3-235ENST00000556082 EPRSP07814 1512 aaKnown RBP12.36□□□□□ -0.43
ATXN3-235ENST00000556082 EHBP1L1Q8N3D4 1523 aa12.36□□□□□ -0.43
ATXN3-235ENST00000556082 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
ATXN3-235ENST00000556082 HOXB3P14651 431 aaPredicted RBP12.35□□□□□ -0.43
ATXN3-235ENST00000556082 EMP3P54852 163 aa12.35□□□□□ -0.43
ATXN3-235ENST00000556082 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
ATXN3-235ENST00000556082 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
ATXN3-235ENST00000556082 MFRPQ9BY79 579 aa12.34□□□□□ -0.43
ATXN3-235ENST00000556082 ARHGEF11O15085 1522 aa12.33□□□□□ -0.44
ATXN3-235ENST00000556082 FGD6Q6ZV73 1430 aa12.32□□□□□ -0.44
ATXN3-235ENST00000556082 ZSWIM6Q9HCJ5 1215 aa12.32□□□□□ -0.44
ATXN3-235ENST00000556082 NCOA2Q15596 1464 aa12.32□□□□□ -0.44
ATXN3-235ENST00000556082 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
ATXN3-235ENST00000556082 MYOM3Q5VTT5 1437 aa12.31□□□□□ -0.44
ATXN3-235ENST00000556082 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
ATXN3-235ENST00000556082 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
ATXN3-235ENST00000556082 CDK11AQ9UQ88 783 aaPredicted RBP12.3□□□□□ -0.44
ATXN3-235ENST00000556082 SUPT6HQ7KZ85 1726 aaKnown RBP12.29□□□□□ -0.44
ATXN3-235ENST00000556082 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
ATXN3-235ENST00000556082 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
ATXN3-235ENST00000556082 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
ATXN3-235ENST00000556082 RAPGEF6Q8TEU7 1601 aa12.28□□□□□ -0.44
ATXN3-235ENST00000556082 DHX57Q6P158 1386 aaKnown RBP12.28□□□□□ -0.44
ATXN3-235ENST00000556082 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
ATXN3-235ENST00000556082 SETD5Q9C0A6 1442 aa12.28□□□□□ -0.44
ATXN3-235ENST00000556082 PRG4Q92954 1404 aaPredicted RBP12.26□□□□□ -0.45
ATXN3-235ENST00000556082 TCOF1Q13428 1488 aaKnown RBP12.26□□□□□ -0.45
ATXN3-235ENST00000556082 CDK13Q14004 1512 aaKnown RBP12.25□□□□□ -0.45
ATXN3-235ENST00000556082 ABCA8O94911 1581 aa12.24□□□□□ -0.45
ATXN3-235ENST00000556082 HS3ST6Q96QI5 342 aa12.24□□□□□ -0.45
ATXN3-235ENST00000556082 RAB3GAP2Q9H2M9 1393 aa12.24□□□□□ -0.45
ATXN3-235ENST00000556082 SHROOM2Q13796 1616 aa12.23□□□□□ -0.45
ATXN3-235ENST00000556082 PLB1Q6P1J6 1458 aa12.23□□□□□ -0.45
ATXN3-235ENST00000556082 PTPRGP23470 1445 aa12.23□□□□□ -0.45
ATXN3-235ENST00000556082 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
ATXN3-235ENST00000556082 ITGAEP38570 1179 aa12.23□□□□□ -0.45
ATXN3-235ENST00000556082 HS6ST3Q8IZP7 471 aa12.23□□□□□ -0.45
ATXN3-235ENST00000556082 TROQ12816 1431 aaPredicted RBP12.22□□□□□ -0.45
ATXN3-235ENST00000556082 CHD1O14646 1710 aa12.2□□□□□ -0.46
ATXN3-235ENST00000556082 HFM1A2PYH4 1435 aa12.2□□□□□ -0.46
ATXN3-235ENST00000556082 ACIN1Q9UKV3 1341 aaKnown RBP12.19□□□□□ -0.46
ATXN3-235ENST00000556082 ATP10BO94823 1461 aa12.19□□□□□ -0.46
ATXN3-235ENST00000556082 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
ATXN3-235ENST00000556082 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
ATXN3-235ENST00000556082 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
ATXN3-235ENST00000556082 AKNAQ7Z591 1439 aa12.18□□□□□ -0.46
ATXN3-235ENST00000556082 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
ATXN3-235ENST00000556082 ERBB3P21860 1342 aa12.17□□□□□ -0.46
ATXN3-235ENST00000556082 KIF3CO14782 793 aa12.17□□□□□ -0.46
ATXN3-235ENST00000556082 GPR153Q6NV75 609 aa12.17□□□□□ -0.46
ATXN3-235ENST00000556082 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
ATXN3-235ENST00000556082 UACAQ9BZF9 1416 aa12.16□□□□□ -0.46
ATXN3-235ENST00000556082 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
ATXN3-235ENST00000556082 ARID3CA6NKF2 412 aa12.15□□□□□ -0.46
ATXN3-235ENST00000556082 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
ATXN3-235ENST00000556082 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
ATXN3-235ENST00000556082 RYDENQ9NUL5 291 aaKnown RBP12.15□□□□□ -0.46
ATXN3-235ENST00000556082 ADCY10Q96PN6 1610 aa12.15□□□□□ -0.47
ATXN3-235ENST00000556082 NAIPQ13075 1403 aa12.14□□□□□ -0.47
ATXN3-235ENST00000556082 TIMELESSQ9UNS1 1208 aa12.14□□□□□ -0.47
ATXN3-235ENST00000556082 GPATCH8Q9UKJ3 1502 aaKnown RBP12.13□□□□□ -0.47
ATXN3-235ENST00000556082 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
ATXN3-235ENST00000556082 ROCK1Q13464 1354 aa12.13□□□□□ -0.47
ATXN3-235ENST00000556082 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
ATXN3-235ENST00000556082 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
ATXN3-235ENST00000556082 UHRF1BP1LA0JNW5 1464 aa12.11□□□□□ -0.47
ATXN3-235ENST00000556082 ABCC10Q5T3U5 1492 aa12.11□□□□□ -0.47
ATXN3-235ENST00000556082 SLC34A2O95436 690 aa12.11□□□□□ -0.47
ATXN3-235ENST00000556082 KRTAP3-3Q9BYR6 98 aa12.1□□□□□ -0.47
ATXN3-235ENST00000556082 KRTAP3-2Q9BYR7 98 aa12.1□□□□□ -0.47
ATXN3-235ENST00000556082 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
ATXN3-235ENST00000556082 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms