RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 KIF3BO15066 747 aa26.99■■□□□ 1.91
XRCC3-215ENST00000555964 DNMT1P26358 1616 aaKnown RBP26.98■■□□□ 1.91
XRCC3-215ENST00000555964 PZPP20742 1482 aa26.98■■□□□ 1.91
XRCC3-215ENST00000555964 POLR1AO95602 1720 aaPredicted RBP26.97■■□□□ 1.91
XRCC3-215ENST00000555964 TNRQ92752 1358 aa26.96■■□□□ 1.91
XRCC3-215ENST00000555964 ZNF335Q9H4Z2 1342 aaPredicted RBP26.95■■□□□ 1.91
XRCC3-215ENST00000555964 TSPY4P0CV99 314 aa26.95■■□□□ 1.9
XRCC3-215ENST00000555964 TSPY10P0CW01 314 aa26.95■■□□□ 1.9
XRCC3-215ENST00000555964 SPATA31D1Q6ZQQ2 1576 aa26.94■■□□□ 1.9
XRCC3-215ENST00000555964 VPS8Q8N3P4 1428 aa26.94■■□□□ 1.9
XRCC3-215ENST00000555964 WASHC2CQ9Y4E1 1318 aa26.93■■□□□ 1.9
XRCC3-215ENST00000555964 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
XRCC3-215ENST00000555964 ZC3H13Q5T200 1668 aaKnown RBP26.89■■□□□ 1.89
XRCC3-215ENST00000555964 MAST1Q9Y2H9 1570 aa26.88■■□□□ 1.89
XRCC3-215ENST00000555964 NLRP1Q9C000 1473 aa26.88■■□□□ 1.89
XRCC3-215ENST00000555964 RNF17Q9BXT8 1623 aaKnown RBP26.87■■□□□ 1.89
XRCC3-215ENST00000555964 MAP3K1Q13233 1512 aa26.87■■□□□ 1.89
XRCC3-215ENST00000555964 UBAP1LF5GYI3 381 aa26.87■■□□□ 1.89
XRCC3-215ENST00000555964 EIF2AK4Q9P2K8 1649 aaKnown RBP26.86■■□□□ 1.89
XRCC3-215ENST00000555964 FBXO31Q5XUX0 539 aaPredicted RBP26.84■■□□□ 1.89
XRCC3-215ENST00000555964 CPS1P31327 1500 aa26.84■■□□□ 1.89
XRCC3-215ENST00000555964 NEURL4Q96JN8 1562 aa26.84■■□□□ 1.89
XRCC3-215ENST00000555964 MIA2Q96PC5 1412 aa26.83■■□□□ 1.89
XRCC3-215ENST00000555964 THEMISQ8N1K5 641 aaPredicted RBP26.83■■□□□ 1.89
XRCC3-215ENST00000555964 UGGT1Q9NYU2 1555 aa26.81■■□□□ 1.88
XRCC3-215ENST00000555964 ANKLE2Q86XL3 938 aa26.81■■□□□ 1.88
XRCC3-215ENST00000555964 DEPDC5O75140 1603 aa26.79■■□□□ 1.88
XRCC3-215ENST00000555964 MYOM3Q5VTT5 1437 aa26.79■■□□□ 1.88
XRCC3-215ENST00000555964 ABCC3O15438 1527 aa26.79■■□□□ 1.88
XRCC3-215ENST00000555964 SHANK2Q9UPX8 1470 aa26.76■■□□□ 1.87
XRCC3-215ENST00000555964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.75■■□□□ 1.873e-6■■■■□ 21.3
XRCC3-215ENST00000555964 ILDR2Q71H61 639 aa26.75■■□□□ 1.87
XRCC3-215ENST00000555964 SOCS7O14512 581 aa26.74■■□□□ 1.87
XRCC3-215ENST00000555964 DUOX2Q9NRD8 1548 aa26.74■■□□□ 1.87
XRCC3-215ENST00000555964 MED14O60244 1454 aa26.74■■□□□ 1.87
XRCC3-215ENST00000555964 IQGAP1P46940 1657 aa26.72■■□□□ 1.87
XRCC3-215ENST00000555964 NPHP4O75161 1426 aaPredicted RBP26.72■■□□□ 1.87
XRCC3-215ENST00000555964 CEP152O94986 1710 aa26.7■■□□□ 1.87
XRCC3-215ENST00000555964 ERVK-7P63135 1459 aa26.7■■□□□ 1.87
XRCC3-215ENST00000555964 TOM1O60784 492 aa26.7■■□□□ 1.86
XRCC3-215ENST00000555964 MROH1Q8NDA8 1641 aa26.69■■□□□ 1.86
XRCC3-215ENST00000555964 VWDEQ8N2E2 1590 aa26.69■■□□□ 1.86
XRCC3-215ENST00000555964 CFAP65Q6ZU64 1925 aaKnown RBP26.69■■□□□ 1.86
XRCC3-215ENST00000555964 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
XRCC3-215ENST00000555964 KANK4Q5T7N3 995 aaPredicted RBP26.68■■□□□ 1.86
XRCC3-215ENST00000555964 CROCC2H7BZ55 1655 aa26.68■■□□□ 1.86
XRCC3-215ENST00000555964 APLP2Q06481 763 aa26.66■■□□□ 1.86
XRCC3-215ENST00000555964 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
XRCC3-215ENST00000555964 PRDM15P57071 1507 aaPredicted RBP26.64■■□□□ 1.85
XRCC3-215ENST00000555964 ERBINQ96RT1 1412 aa26.64■■□□□ 1.85
XRCC3-215ENST00000555964 KIF15Q9NS87 1388 aa26.63■■□□□ 1.85
XRCC3-215ENST00000555964 PTPN23Q9H3S7 1636 aa26.63■■□□□ 1.85
XRCC3-215ENST00000555964 UBR1Q8IWV7 1749 aa26.62■■□□□ 1.85
XRCC3-215ENST00000555964 SYNMO15061 1565 aa26.62■■□□□ 1.85
XRCC3-215ENST00000555964 PIP4K2BP78356 416 aa26.6■■□□□ 1.85
XRCC3-215ENST00000555964 ARHGAP31Q2M1Z3 1444 aa26.59■■□□□ 1.85
XRCC3-215ENST00000555964 ABCC5O15440 1437 aa26.56■■□□□ 1.84
XRCC3-215ENST00000555964 SCAF11Q99590 1463 aaKnown RBP26.55■■□□□ 1.84
XRCC3-215ENST00000555964 KANK1Q14678 1352 aa26.55■■□□□ 1.84
XRCC3-215ENST00000555964 HSPA1LP34931 641 aa26.54■■□□□ 1.84
XRCC3-215ENST00000555964 DAPK1P53355 1430 aa26.54■■□□□ 1.84
XRCC3-215ENST00000555964 SLIT1O75093 1534 aa26.53■■□□□ 1.84
XRCC3-215ENST00000555964 STRCP1A6NGW2 1772 aa26.52■■□□□ 1.84
XRCC3-215ENST00000555964 ARHGAP23Q9P227 1491 aa26.51■■□□□ 1.83
XRCC3-215ENST00000555964 FGD6Q6ZV73 1430 aa26.51■■□□□ 1.83
XRCC3-215ENST00000555964 RRP7BPQ9NSQ0 103 aa26.51■■□□□ 1.83
XRCC3-215ENST00000555964 MED1Q15648 1581 aaPredicted RBP26.5■■□□□ 1.83
XRCC3-215ENST00000555964 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
XRCC3-215ENST00000555964 ANKRD30AQ9BXX3 1397 aa26.49■■□□□ 1.83
XRCC3-215ENST00000555964 EID1Q9Y6B2 187 aa26.49■■□□□ 1.83
XRCC3-215ENST00000555964 KDM5AP29375 1690 aaKnown RBP26.49■■□□□ 1.83
XRCC3-215ENST00000555964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.46■■□□□ 1.83
XRCC3-215ENST00000555964 PIK3C2BO00750 1634 aa26.46■■□□□ 1.83
XRCC3-215ENST00000555964 ALKQ9UM73 1620 aa26.46■■□□□ 1.83
XRCC3-215ENST00000555964 LMTK2Q8IWU2 1503 aa26.45■■□□□ 1.83
XRCC3-215ENST00000555964 TXNDC2Q86VQ3 553 aa26.45■■□□□ 1.82
XRCC3-215ENST00000555964 STAG3Q9UJ98 1225 aa26.44■■□□□ 1.82
XRCC3-215ENST00000555964 TMEM2Q9UHN6 1383 aa26.41■■□□□ 1.82
XRCC3-215ENST00000555964 EFCAB6Q5THR3 1501 aa26.4■■□□□ 1.82
XRCC3-215ENST00000555964 LTKP29376 864 aa26.4■■□□□ 1.82
XRCC3-215ENST00000555964 ADGRL2O95490 1459 aa26.36■■□□□ 1.81
XRCC3-215ENST00000555964 PHF23Q9BUL5 403 aaPredicted RBP26.36■■□□□ 1.81
XRCC3-215ENST00000555964 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
XRCC3-215ENST00000555964 XIRP1Q702N8 1843 aaKnown RBP26.34■■□□□ 1.81
XRCC3-215ENST00000555964 ADGRB3O60242 1522 aa26.33■■□□□ 1.81
XRCC3-215ENST00000555964 NOS1P29475 1434 aa26.31■■□□□ 1.8
XRCC3-215ENST00000555964 RPRD2Q5VT52 1461 aaKnown RBP26.31■■□□□ 1.8
XRCC3-215ENST00000555964 IDI1Q13907 227 aa26.3■■□□□ 1.8
XRCC3-215ENST00000555964 SLC52A1Q9NWF4 448 aa26.3■■□□□ 1.8
XRCC3-215ENST00000555964 ANKRD50Q9ULJ7 1429 aa26.27■■□□□ 1.8
XRCC3-215ENST00000555964 FAM50AQ14320 339 aaKnown RBP26.26■■□□□ 1.79
XRCC3-215ENST00000555964 TET3O43151 1660 aa26.25■■□□□ 1.79
XRCC3-215ENST00000555964 KCNA6P17658 529 aa26.24■■□□□ 1.79
XRCC3-215ENST00000555964 NKTRP30414 1462 aaKnown RBP26.23■■□□□ 1.79
XRCC3-215ENST00000555964 GCC2Q8IWJ2 1684 aa26.23■■□□□ 1.79
XRCC3-215ENST00000555964 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
XRCC3-215ENST00000555964 FAM135BQ49AJ0 1406 aa26.22■■□□□ 1.79
XRCC3-215ENST00000555964 TMEM94Q12767 1356 aa26.21■■□□□ 1.79
XRCC3-215ENST00000555964 NWD1Q149M9 1564 aa26.21■■□□□ 1.79
XRCC3-215ENST00000555964 HDGFP51858 240 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms