RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 PKD2Q13563 968 aa10.18□□□□□ -0.78
CHD8-209ENST00000555935 ST20-MTHFSA0A0A6YYL1 179 aa10.18□□□□□ -0.78
CHD8-209ENST00000555935 ZNF644Q9H582 1327 aaPredicted RBP10.17□□□□□ -0.78
CHD8-209ENST00000555935 CDCA7LQ96GN5 454 aa10.17□□□□□ -0.78
CHD8-209ENST00000555935 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
CHD8-209ENST00000555935 PLIN1O60240 522 aa10.16□□□□□ -0.78
CHD8-209ENST00000555935 CAMSAP2Q08AD1 1489 aa10.16□□□□□ -0.78
CHD8-209ENST00000555935 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
CHD8-209ENST00000555935 C8orf34Q49A92 452 aa10.15□□□□□ -0.78
CHD8-209ENST00000555935 SLC4A3P48751 1232 aa10.14□□□□□ -0.79
CHD8-209ENST00000555935 ANKRD50Q9ULJ7 1429 aa10.13□□□□□ -0.79
CHD8-209ENST00000555935 ITSN2Q9NZM3 1697 aa10.13□□□□□ -0.79
CHD8-209ENST00000555935 FRAT2O75474 233 aaPredicted RBP10.13□□□□□ -0.79
CHD8-209ENST00000555935 KIAA0586Q9BVV6 1533 aa10.13□□□□□ -0.79
CHD8-209ENST00000555935 KDM5DQ9BY66 1539 aa10.13□□□□□ -0.79
CHD8-209ENST00000555935 CROCC2H7BZ55 1655 aa10.13□□□□□ -0.79
CHD8-209ENST00000555935 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
CHD8-209ENST00000555935 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.13□□□□□ -0.79
CHD8-209ENST00000555935 NUP153P49790 1475 aaKnown RBP10.12□□□□□ -0.79
CHD8-209ENST00000555935 SKAP1Q86WV1 359 aa10.12□□□□□ -0.79
CHD8-209ENST00000555935 CEP170Q5SW79 1584 aa10.12□□□□□ -0.79
CHD8-209ENST00000555935 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
CHD8-209ENST00000555935 TROQ12816 1431 aaPredicted RBP10.12□□□□□ -0.79
CHD8-209ENST00000555935 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
CHD8-209ENST00000555935 ADAMTS12P58397 1594 aa10.11□□□□□ -0.79
CHD8-209ENST00000555935 ARID3CA6NKF2 412 aa10.1□□□□□ -0.79
CHD8-209ENST00000555935 NUP155O75694 1391 aa10.1□□□□□ -0.79
CHD8-209ENST00000555935 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
CHD8-209ENST00000555935 TARBP1Q13395 1621 aaKnown RBP10.1□□□□□ -0.79
CHD8-209ENST00000555935 RAPGEF6Q8TEU7 1601 aa10.1□□□□□ -0.79
CHD8-209ENST00000555935 L1TD1Q5T7N2 865 aaKnown RBP10.1□□□□□ -0.79
CHD8-209ENST00000555935 C20orf194Q5TEA3 1177 aa10.1□□□□□ -0.79
CHD8-209ENST00000555935 EIF3AQ14152 1382 aaKnown RBP10.1□□□□□ -0.79
CHD8-209ENST00000555935 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
CHD8-209ENST00000555935 GPATCH8Q9UKJ3 1502 aaKnown RBP10.1□□□□□ -0.79
CHD8-209ENST00000555935 GPRASP1Q5JY77 1395 aa10.09□□□□□ -0.79
CHD8-209ENST00000555935 DCAF11Q8TEB1 546 aa10.09□□□□□ -0.79
CHD8-209ENST00000555935 KIAA0556O60303 1618 aa10.09□□□□□ -0.79
CHD8-209ENST00000555935 PTPRGP23470 1445 aa10.09□□□□□ -0.79
CHD8-209ENST00000555935 PBRM1Q86U86 1689 aa10.08□□□□□ -0.8
CHD8-209ENST00000555935 KDM2AQ9Y2K7 1162 aa10.08□□□□□ -0.8
CHD8-209ENST00000555935 PRAG1Q86YV5 1406 aa10.08□□□□□ -0.8
CHD8-209ENST00000555935 PDS5BQ9NTI5 1447 aa10.08□□□□□ -0.8
CHD8-209ENST00000555935 LAMC1P11047 1609 aa10.08□□□□□ -0.8
CHD8-209ENST00000555935 ADCY10Q96PN6 1610 aa10.08□□□□□ -0.8
CHD8-209ENST00000555935 BECN1Q14457 450 aa10.07□□□□□ -0.8
CHD8-209ENST00000555935 DUSP27Q5VZP5 1158 aa10.07□□□□□ -0.8
CHD8-209ENST00000555935 TRPM1Q7Z4N2 1603 aa10.07□□□□□ -0.8
CHD8-209ENST00000555935 CLASP1Q7Z460 1538 aa10.06□□□□□ -0.8
CHD8-209ENST00000555935 DISP1Q96F81 1524 aa10.06□□□□□ -0.8
CHD8-209ENST00000555935 PRG4Q92954 1404 aaPredicted RBP10.06□□□□□ -0.8
CHD8-209ENST00000555935 GLIPR1L2Q4G1C9 344 aa10.06□□□□□ -0.8
CHD8-209ENST00000555935 ZNF521Q96K83 1311 aa10.06□□□□□ -0.8
CHD8-209ENST00000555935 CC2D1BQ5T0F9 858 aaKnown RBP10.05□□□□□ -0.8
CHD8-209ENST00000555935 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
CHD8-209ENST00000555935 GOLGA2Q08379 1002 aa10.05□□□□□ -0.8
CHD8-209ENST00000555935 C9orf84Q5VXU9 1444 aa10.05□□□□□ -0.8
CHD8-209ENST00000555935 RGS3P49796 1198 aa10.04□□□□□ -0.8
CHD8-209ENST00000555935 PANK3Q9H999 370 aa10.04□□□□□ -0.8
CHD8-209ENST00000555935 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
CHD8-209ENST00000555935 MAPK8IP3Q9UPT6 1336 aa10.04□□□□□ -0.8
CHD8-209ENST00000555935 PLEKHH1Q9ULM0 1364 aa10.04□□□□□ -0.8
CHD8-209ENST00000555935 PRDM15P57071 1507 aaPredicted RBP10.04□□□□□ -0.8
CHD8-209ENST00000555935 TESK2Q96S53 571 aa10.03□□□□□ -0.8
CHD8-209ENST00000555935 ERBINQ96RT1 1412 aa10.03□□□□□ -0.8
CHD8-209ENST00000555935 VIRMAQ69YN4 1812 aaKnown RBP10.03□□□□□ -0.8
CHD8-209ENST00000555935 USP19O94966 1318 aa10.03□□□□□ -0.8
CHD8-209ENST00000555935 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
CHD8-209ENST00000555935 POGKQ9P215 609 aa10.03□□□□□ -0.8
CHD8-209ENST00000555935 ZNF777Q9ULD5 760 aaPredicted RBP10.03□□□□□ -0.8
CHD8-209ENST00000555935 DISP3Q9P2K9 1392 aa10.03□□□□□ -0.8
CHD8-209ENST00000555935 TMF1P82094 1093 aa10.03□□□□□ -0.8
CHD8-209ENST00000555935 CCDC144AA2RUR9 1427 aa10.02□□□□□ -0.81
CHD8-209ENST00000555935 ZMYM3Q14202 1370 aa10.02□□□□□ -0.81
CHD8-209ENST00000555935 NINLQ9Y2I6 1382 aa10.02□□□□□ -0.81
CHD8-209ENST00000555935 SLFN5Q08AF3 891 aa10.02□□□□□ -0.81
CHD8-209ENST00000555935 RRAGDQ9NQL2 400 aaPredicted RBP10.02□□□□□ -0.81
CHD8-209ENST00000555935 NUP160Q12769 1436 aa10.01□□□□□ -0.81
CHD8-209ENST00000555935 EIF2AK4Q9P2K8 1649 aaKnown RBP10.01□□□□□ -0.81
CHD8-209ENST00000555935 TRMT2AQ8IZ69 625 aaKnown RBP10.01□□□□□ -0.81
CHD8-209ENST00000555935 ABCC10Q5T3U5 1492 aa10.01□□□□□ -0.81
CHD8-209ENST00000555935 CGNL1Q0VF96 1302 aa10□□□□□ -0.81
CHD8-209ENST00000555935 NKTRP30414 1462 aaKnown RBP10□□□□□ -0.81
CHD8-209ENST00000555935 TSPY4P0CV99 314 aa10□□□□□ -0.81
CHD8-209ENST00000555935 TSPY10P0CW01 314 aa10□□□□□ -0.81
CHD8-209ENST00000555935 CDC42BPAQ5VT25 1732 aa10□□□□□ -0.81
CHD8-209ENST00000555935 ANTXR1Q9H6X2 564 aa10□□□□□ -0.81
CHD8-209ENST00000555935 FAM135AQ9P2D6 1515 aa9.99□□□□□ -0.81
CHD8-209ENST00000555935 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
CHD8-209ENST00000555935 PPP2R1AP30153 589 aa9.99□□□□□ -0.81
CHD8-209ENST00000555935 NBPF1Q3BBV0 1214 aa9.99□□□□□ -0.81
CHD8-209ENST00000555935 NGEFQ8N5V2 710 aa9.99□□□□□ -0.81
CHD8-209ENST00000555935 DNAJC5BQ9UF47 199 aa9.99□□□□□ -0.81
CHD8-209ENST00000555935 CLCN1P35523 988 aa9.99□□□□□ -0.81
CHD8-209ENST00000555935 PDE3AQ14432 1141 aa9.99□□□□□ -0.81
CHD8-209ENST00000555935 A2MP01023 1474 aa9.98□□□□□ -0.81
CHD8-209ENST00000555935 NLRP1Q9C000 1473 aa9.98□□□□□ -0.81
CHD8-209ENST00000555935 ARHGEF5Q12774 1597 aa9.98□□□□□ -0.81
CHD8-209ENST00000555935 UPF2Q9HAU5 1272 aaKnown RBP9.98□□□□□ -0.81
CHD8-209ENST00000555935 CCDC141Q6ZP82 1450 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms