RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-222	ENST00000555914	RSPH4A	Q5TD94	716 aa		14.04	□□□□□ -0.16
HNRNPC-222	ENST00000555914	FBXO31	Q5XUX0	539 aa	Predicted RBP	14.04	□□□□□ -0.16
HNRNPC-222	ENST00000555914	ARHGEF5	Q12774	1597 aa		14.04	□□□□□ -0.16
HNRNPC-222	ENST00000555914	PHF23	Q9BUL5	403 aa	Predicted RBP	14.04	□□□□□ -0.16
HNRNPC-222	ENST00000555914	TSPY4	P0CV99	314 aa		14.03	□□□□□ -0.16
HNRNPC-222	ENST00000555914	TSPY10	P0CW01	314 aa		14.03	□□□□□ -0.16
HNRNPC-222	ENST00000555914	TCOF1	Q13428	1488 aa	Known RBP	14.01	□□□□□ -0.17
HNRNPC-222	ENST00000555914	KDM5D	Q9BY66	1539 aa		14.01	□□□□□ -0.17
HNRNPC-222	ENST00000555914	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	14	□□□□□ -0.17
HNRNPC-222	ENST00000555914	WASHC2C	Q9Y4E1	1318 aa		14	□□□□□ -0.17
HNRNPC-222	ENST00000555914	PLA2R1	Q13018	1463 aa		14	□□□□□ -0.17
HNRNPC-222	ENST00000555914	MAP3K1	Q13233	1512 aa		14	□□□□□ -0.17
HNRNPC-222	ENST00000555914	DNMT1	P26358	1616 aa	Known RBP	14	□□□□□ -0.17
HNRNPC-222	ENST00000555914	MYOM3	Q5VTT5	1437 aa		13.99	□□□□□ -0.17
HNRNPC-222	ENST00000555914	A2ML1	A8K2U0	1454 aa		13.99	□□□□□ -0.17
HNRNPC-222	ENST00000555914	PKD2	Q13563	968 aa		13.98	□□□□□ -0.17
HNRNPC-222	ENST00000555914	PZP	P20742	1482 aa		13.98	□□□□□ -0.17
HNRNPC-222	ENST00000555914	TNR	Q92752	1358 aa		13.98	□□□□□ -0.17
HNRNPC-222	ENST00000555914	MAST1	Q9Y2H9	1570 aa		13.97	□□□□□ -0.17
HNRNPC-222	ENST00000555914	MIA2	Q96PC5	1412 aa		13.97	□□□□□ -0.17
HNRNPC-222	ENST00000555914	FAM135A	Q9P2D6	1515 aa		13.94	□□□□□ -0.18
HNRNPC-222	ENST00000555914	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.94	□□□□□ -0.18	2e-10	■□□□□ 8.9
HNRNPC-222	ENST00000555914	RNF17	Q9BXT8	1623 aa	Known RBP	13.94	□□□□□ -0.18
HNRNPC-222	ENST00000555914	MROH1	Q8NDA8	1641 aa		13.93	□□□□□ -0.18
HNRNPC-222	ENST00000555914	ABCC3	O15438	1527 aa		13.93	□□□□□ -0.18
HNRNPC-222	ENST00000555914	NEURL4	Q96JN8	1562 aa		13.93	□□□□□ -0.18
HNRNPC-222	ENST00000555914	IQSEC2	Q5JU85	1478 aa		13.92	□□□□□ -0.18
HNRNPC-222	ENST00000555914	PCGF6	Q9BYE7	350 aa		13.92	□□□□□ -0.18
HNRNPC-222	ENST00000555914	CFAP65	Q6ZU64	1925 aa	Known RBP	13.92	□□□□□ -0.18
HNRNPC-222	ENST00000555914	ABCC5	O15440	1437 aa		13.91	□□□□□ -0.18
HNRNPC-222	ENST00000555914	POLR1A	O95602	1720 aa	Predicted RBP	13.91	□□□□□ -0.18
HNRNPC-222	ENST00000555914	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.91	□□□□□ -0.18
HNRNPC-222	ENST00000555914	UGGT1	Q9NYU2	1555 aa		13.91	□□□□□ -0.18
HNRNPC-222	ENST00000555914	PTPN23	Q9H3S7	1636 aa		13.9	□□□□□ -0.18
HNRNPC-222	ENST00000555914	CEP152	O94986	1710 aa		13.9	□□□□□ -0.18
HNRNPC-222	ENST00000555914	APLP2	Q06481	763 aa		13.9	□□□□□ -0.18
HNRNPC-222	ENST00000555914	RRP7BP	Q9NSQ0	103 aa		13.9	□□□□□ -0.18
HNRNPC-222	ENST00000555914	DUOX2	Q9NRD8	1548 aa		13.89	□□□□□ -0.19
HNRNPC-222	ENST00000555914	NLRP1	Q9C000	1473 aa		13.89	□□□□□ -0.19
HNRNPC-222	ENST00000555914	CROCC2	H7BZ55	1655 aa		13.89	□□□□□ -0.19
HNRNPC-222	ENST00000555914	ZC3H13	Q5T200	1668 aa	Known RBP	13.89	□□□□□ -0.19
HNRNPC-222	ENST00000555914	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.88	□□□□□ -0.19
HNRNPC-222	ENST00000555914	KIF15	Q9NS87	1388 aa		13.88	□□□□□ -0.19
HNRNPC-222	ENST00000555914	SPATA31D1	Q6ZQQ2	1576 aa		13.88	□□□□□ -0.19
HNRNPC-222	ENST00000555914	UBAP1L	F5GYI3	381 aa		13.88	□□□□□ -0.19
HNRNPC-222	ENST00000555914	ANKLE2	Q86XL3	938 aa		13.88	□□□□□ -0.19
HNRNPC-222	ENST00000555914	DAPK1	P53355	1430 aa		13.87	□□□□□ -0.19
HNRNPC-222	ENST00000555914	FGD6	Q6ZV73	1430 aa		13.87	□□□□□ -0.19
HNRNPC-222	ENST00000555914	ERVK-7	P63135	1459 aa		13.87	□□□□□ -0.19
HNRNPC-222	ENST00000555914	SHANK2	Q9UPX8	1470 aa		13.86	□□□□□ -0.19
HNRNPC-222	ENST00000555914	DISP3	Q9P2K9	1392 aa		13.86	□□□□□ -0.19
HNRNPC-222	ENST00000555914	CHIC2	Q9UKJ5	165 aa		13.86	□□□□□ -0.19
HNRNPC-222	ENST00000555914	ILDR2	Q71H61	639 aa		13.85	□□□□□ -0.19
HNRNPC-222	ENST00000555914	PRDM15	P57071	1507 aa	Predicted RBP	13.85	□□□□□ -0.19
HNRNPC-222	ENST00000555914	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	2e-26	■■□□□ 11.8
HNRNPC-222	ENST00000555914	NPHP4	O75161	1426 aa	Predicted RBP	13.84	□□□□□ -0.19
HNRNPC-222	ENST00000555914	ERBIN	Q96RT1	1412 aa		13.84	□□□□□ -0.19
HNRNPC-222	ENST00000555914	MED14	O60244	1454 aa		13.84	□□□□□ -0.19
HNRNPC-222	ENST00000555914	VWDE	Q8N2E2	1590 aa		13.83	□□□□□ -0.19
HNRNPC-222	ENST00000555914	DEPDC5	O75140	1603 aa		13.83	□□□□□ -0.2
HNRNPC-222	ENST00000555914	TRIM26	Q12899	539 aa	Predicted RBP	13.82	□□□□□ -0.2
HNRNPC-222	ENST00000555914	UBR1	Q8IWV7	1749 aa		13.82	□□□□□ -0.2
HNRNPC-222	ENST00000555914	IQGAP1	P46940	1657 aa		13.81	□□□□□ -0.2
HNRNPC-222	ENST00000555914	ARHGAP31	Q2M1Z3	1444 aa		13.81	□□□□□ -0.2
HNRNPC-222	ENST00000555914	CPS1	P31327	1500 aa		13.8	□□□□□ -0.2
HNRNPC-222	ENST00000555914	STRCP1	A6NGW2	1772 aa		13.8	□□□□□ -0.2
HNRNPC-222	ENST00000555914	LTK	P29376	864 aa		13.8	□□□□□ -0.2
HNRNPC-222	ENST00000555914	PIP4K2B	P78356	416 aa		13.79	□□□□□ -0.2
HNRNPC-222	ENST00000555914	SCAF1	Q9H7N4	1312 aa	Known RBP	13.79	□□□□□ -0.2
HNRNPC-222	ENST00000555914	ANKRD30A	Q9BXX3	1397 aa		13.78	□□□□□ -0.2
HNRNPC-222	ENST00000555914	FAM50A	Q14320	339 aa	Known RBP	13.78	□□□□□ -0.2
HNRNPC-222	ENST00000555914	PIK3C2B	O00750	1634 aa		13.77	□□□□□ -0.21
HNRNPC-222	ENST00000555914	ALK	Q9UM73	1620 aa		13.77	□□□□□ -0.21
HNRNPC-222	ENST00000555914	ARHGAP23	Q9P227	1491 aa		13.76	□□□□□ -0.21
HNRNPC-222	ENST00000555914	HSPA1L	P34931	641 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	TXNDC2	Q86VQ3	553 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	SLIT1	O75093	1534 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	SCAF11	Q99590	1463 aa	Known RBP	13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	KANK1	Q14678	1352 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	TOM1	O60784	492 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	IDI1	Q13907	227 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	LMTK2	Q8IWU2	1503 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	LRRC7	Q96NW7	1537 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	ADGRL2	O95490	1459 aa		13.75	□□□□□ -0.21
HNRNPC-222	ENST00000555914	SYNM	O15061	1565 aa		13.74	□□□□□ -0.21
HNRNPC-222	ENST00000555914	TMEM2	Q9UHN6	1383 aa		13.72	□□□□□ -0.21
HNRNPC-222	ENST00000555914	EFCAB6	Q5THR3	1501 aa		13.71	□□□□□ -0.21
HNRNPC-222	ENST00000555914	ANKRD50	Q9ULJ7	1429 aa		13.71	□□□□□ -0.21
HNRNPC-222	ENST00000555914	STAG3	Q9UJ98	1225 aa		13.71	□□□□□ -0.21
HNRNPC-222	ENST00000555914	NOS1	P29475	1434 aa		13.7	□□□□□ -0.22
HNRNPC-222	ENST00000555914	EID1	Q9Y6B2	187 aa		13.7	□□□□□ -0.22
HNRNPC-222	ENST00000555914	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.69	□□□□□ -0.22
HNRNPC-222	ENST00000555914	SOCS7	O14512	581 aa		13.69	□□□□□ -0.22
HNRNPC-222	ENST00000555914	XIRP1	Q702N8	1843 aa	Known RBP	13.68	□□□□□ -0.22
HNRNPC-222	ENST00000555914	KDM5A	P29375	1690 aa	Known RBP	13.67	□□□□□ -0.22
HNRNPC-222	ENST00000555914	SLC26A8	Q96RN1	970 aa		13.66	□□□□□ -0.22
HNRNPC-222	ENST00000555914	ADGRB3	O60242	1522 aa		13.66	□□□□□ -0.22
HNRNPC-222	ENST00000555914	TET3	O43151	1660 aa		13.66	□□□□□ -0.22
HNRNPC-222	ENST00000555914	RBM33	Q96EV2	1170 aa	Known RBP	13.65	□□□□□ -0.22
HNRNPC-222	ENST00000555914	SLC52A1	Q9NWF4	448 aa		13.65	□□□□□ -0.22

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