RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 MYO3AQ8NEV4 1616 aa20.04■□□□□ 0.8
HNRNPC-221ENST00000555883 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
HNRNPC-221ENST00000555883 KIF3BO15066 747 aa20.02■□□□□ 0.8
HNRNPC-221ENST00000555883 CAMSAP1Q5T5Y3 1602 aa20.02■□□□□ 0.79
HNRNPC-221ENST00000555883 CEP170BQ9Y4F5 1589 aaPredicted RBP20.01■□□□□ 0.79
HNRNPC-221ENST00000555883 PZPP20742 1482 aa19.99■□□□□ 0.79
HNRNPC-221ENST00000555883 APLP2Q06481 763 aa19.97■□□□□ 0.79
HNRNPC-221ENST00000555883 RNF17Q9BXT8 1623 aaKnown RBP19.97■□□□□ 0.79
HNRNPC-221ENST00000555883 EIF2AK4Q9P2K8 1649 aaKnown RBP19.97■□□□□ 0.79
HNRNPC-221ENST00000555883 A2ML1A8K2U0 1454 aa19.97■□□□□ 0.79
HNRNPC-221ENST00000555883 TCOF1Q13428 1488 aaKnown RBP19.97■□□□□ 0.79
HNRNPC-221ENST00000555883 PKD2Q13563 968 aa19.96■□□□□ 0.79
HNRNPC-221ENST00000555883 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
HNRNPC-221ENST00000555883 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
HNRNPC-221ENST00000555883 IQSEC2Q5JU85 1478 aa19.93■□□□□ 0.78
HNRNPC-221ENST00000555883 LTBP4Q8N2S1 1624 aa19.93■□□□□ 0.78
HNRNPC-221ENST00000555883 ZC3H13Q5T200 1668 aaKnown RBP19.93■□□□□ 0.78
HNRNPC-221ENST00000555883 TNRQ92752 1358 aa19.93■□□□□ 0.78
HNRNPC-221ENST00000555883 DUOX2Q9NRD8 1548 aa19.92■□□□□ 0.78
HNRNPC-221ENST00000555883 DNMT1P26358 1616 aaKnown RBP19.91■□□□□ 0.78
HNRNPC-221ENST00000555883 PTPN23Q9H3S7 1636 aa19.91■□□□□ 0.78
HNRNPC-221ENST00000555883 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
HNRNPC-221ENST00000555883 NLRP1Q9C000 1473 aa19.9■□□□□ 0.78
HNRNPC-221ENST00000555883 ABCC3O15438 1527 aa19.89■□□□□ 0.77
HNRNPC-221ENST00000555883 ABCC5O15440 1437 aa19.89■□□□□ 0.77
HNRNPC-221ENST00000555883 CROCC2H7BZ55 1655 aa19.88■□□□□ 0.77
HNRNPC-221ENST00000555883 NCKAP5LQ9HCH0 1330 aa19.88■□□□□ 0.77
HNRNPC-221ENST00000555883 FBXO31Q5XUX0 539 aaPredicted RBP19.88■□□□□ 0.77
HNRNPC-221ENST00000555883 MROH1Q8NDA8 1641 aa19.87■□□□□ 0.77
HNRNPC-221ENST00000555883 ERBINQ96RT1 1412 aa19.87■□□□□ 0.77
HNRNPC-221ENST00000555883 KIF15Q9NS87 1388 aa19.86■□□□□ 0.77
HNRNPC-221ENST00000555883 DAPK1P53355 1430 aa19.85■□□□□ 0.77
HNRNPC-221ENST00000555883 SPATA31D1Q6ZQQ2 1576 aa19.85■□□□□ 0.77
HNRNPC-221ENST00000555883 PHF23Q9BUL5 403 aaPredicted RBP19.84■□□□□ 0.77
HNRNPC-221ENST00000555883 PRDM15P57071 1507 aaPredicted RBP19.84■□□□□ 0.77
HNRNPC-221ENST00000555883 THEMISQ8N1K5 641 aaPredicted RBP19.82■□□□□ 0.76
HNRNPC-221ENST00000555883 ARHGAP31Q2M1Z3 1444 aa19.81■□□□□ 0.76
HNRNPC-221ENST00000555883 UGGT1Q9NYU2 1555 aa19.81■□□□□ 0.76
HNRNPC-221ENST00000555883 ERVK-7P63135 1459 aa19.8■□□□□ 0.76
HNRNPC-221ENST00000555883 POLR1AO95602 1720 aaPredicted RBP19.79■□□□□ 0.76
HNRNPC-221ENST00000555883 ZNF335Q9H4Z2 1342 aaPredicted RBP19.79■□□□□ 0.76
HNRNPC-221ENST00000555883 NEURL4Q96JN8 1562 aa19.79■□□□□ 0.76
HNRNPC-221ENST00000555883 DEPDC5O75140 1603 aa19.79■□□□□ 0.76
HNRNPC-221ENST00000555883 ANKRD30AQ9BXX3 1397 aa19.79■□□□□ 0.76
HNRNPC-221ENST00000555883 MED14O60244 1454 aa19.78■□□□□ 0.76
HNRNPC-221ENST00000555883 ANKLE2Q86XL3 938 aa19.77■□□□□ 0.76
HNRNPC-221ENST00000555883 RRP7BPQ9NSQ0 103 aa19.77■□□□□ 0.76
HNRNPC-221ENST00000555883 ADGRL2O95490 1459 aa19.76■□□□□ 0.75
HNRNPC-221ENST00000555883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.76■□□□□ 0.752e-10■□□□□ 8.9
HNRNPC-221ENST00000555883 CEP152O94986 1710 aa19.75■□□□□ 0.75
HNRNPC-221ENST00000555883 LMTK2Q8IWU2 1503 aa19.74■□□□□ 0.75
HNRNPC-221ENST00000555883 KANK1Q14678 1352 aa19.73■□□□□ 0.75
HNRNPC-221ENST00000555883 VWDEQ8N2E2 1590 aa19.73■□□□□ 0.75
HNRNPC-221ENST00000555883 CPS1P31327 1500 aa19.72■□□□□ 0.75
HNRNPC-221ENST00000555883 NPHP4O75161 1426 aaPredicted RBP19.7■□□□□ 0.74
HNRNPC-221ENST00000555883 UBR1Q8IWV7 1749 aa19.68■□□□□ 0.74
HNRNPC-221ENST00000555883 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
HNRNPC-221ENST00000555883 ARHGAP23Q9P227 1491 aa19.67■□□□□ 0.74
HNRNPC-221ENST00000555883 SLIT1O75093 1534 aa19.66■□□□□ 0.74
HNRNPC-221ENST00000555883 IQGAP1P46940 1657 aa19.66■□□□□ 0.74
HNRNPC-221ENST00000555883 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
HNRNPC-221ENST00000555883 FAM50AQ14320 339 aaKnown RBP19.64■□□□□ 0.73
HNRNPC-221ENST00000555883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.732e-26■■□□□ 11.8
HNRNPC-221ENST00000555883 ANKRD50Q9ULJ7 1429 aa19.64■□□□□ 0.73
HNRNPC-221ENST00000555883 EFCAB6Q5THR3 1501 aa19.64■□□□□ 0.73
HNRNPC-221ENST00000555883 SCAF11Q99590 1463 aaKnown RBP19.63■□□□□ 0.73
HNRNPC-221ENST00000555883 UBAP1LF5GYI3 381 aa19.62■□□□□ 0.73
HNRNPC-221ENST00000555883 RPRD2Q5VT52 1461 aaKnown RBP19.61■□□□□ 0.73
HNRNPC-221ENST00000555883 NOS1P29475 1434 aa19.61■□□□□ 0.73
HNRNPC-221ENST00000555883 ROCK1Q13464 1354 aa19.6■□□□□ 0.73
HNRNPC-221ENST00000555883 PIK3C2BO00750 1634 aa19.58■□□□□ 0.73
HNRNPC-221ENST00000555883 TMEM2Q9UHN6 1383 aa19.58■□□□□ 0.73
HNRNPC-221ENST00000555883 SYNMO15061 1565 aa19.57■□□□□ 0.72
HNRNPC-221ENST00000555883 TOM1O60784 492 aa19.56■□□□□ 0.72
HNRNPC-221ENST00000555883 LTKP29376 864 aa19.56■□□□□ 0.72
HNRNPC-221ENST00000555883 SLC52A1Q9NWF4 448 aa19.56■□□□□ 0.72
HNRNPC-221ENST00000555883 EID1Q9Y6B2 187 aa19.56■□□□□ 0.72
HNRNPC-221ENST00000555883 CFAP65Q6ZU64 1925 aaKnown RBP19.56■□□□□ 0.72
HNRNPC-221ENST00000555883 UNC13BO14795 1591 aa19.55■□□□□ 0.72
HNRNPC-221ENST00000555883 IDI1Q13907 227 aa19.55■□□□□ 0.72
HNRNPC-221ENST00000555883 TXNDC2Q86VQ3 553 aa19.55■□□□□ 0.72
HNRNPC-221ENST00000555883 TET3O43151 1660 aa19.54■□□□□ 0.72
HNRNPC-221ENST00000555883 ADGRB3O60242 1522 aa19.53■□□□□ 0.72
HNRNPC-221ENST00000555883 LRRC7Q96NW7 1537 aa19.53■□□□□ 0.72
HNRNPC-221ENST00000555883 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
HNRNPC-221ENST00000555883 STRCP1A6NGW2 1772 aa19.5■□□□□ 0.71
HNRNPC-221ENST00000555883 DISP3Q9P2K9 1392 aa19.5■□□□□ 0.71
HNRNPC-221ENST00000555883 GCC2Q8IWJ2 1684 aa19.49■□□□□ 0.71
HNRNPC-221ENST00000555883 ALKQ9UM73 1620 aa19.47■□□□□ 0.71
HNRNPC-221ENST00000555883 IQGAP3Q86VI3 1631 aa19.47■□□□□ 0.71
HNRNPC-221ENST00000555883 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
HNRNPC-221ENST00000555883 PIP4K2BP78356 416 aa19.43■□□□□ 0.7
HNRNPC-221ENST00000555883 RRBP1Q9P2E9 1410 aaKnown RBP19.42■□□□□ 0.7
HNRNPC-221ENST00000555883 TMEM131LA2VDJ0 1609 aa19.41■□□□□ 0.7
HNRNPC-221ENST00000555883 E9PCH4 1651 aa19.41■□□□□ 0.7
HNRNPC-221ENST00000555883 HSPA1LP34931 641 aa19.41■□□□□ 0.7
HNRNPC-221ENST00000555883 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
HNRNPC-221ENST00000555883 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
HNRNPC-221ENST00000555883 KCNA6P17658 529 aa19.4■□□□□ 0.7
HNRNPC-221ENST00000555883 NUP155O75694 1391 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms