RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 MYCNP04198 464 aaPredicted RBP10.12□□□□□ -0.79
NEK9-207ENST00000555763 PLCH2O75038 1416 aa10.12□□□□□ -0.79
NEK9-207ENST00000555763 MLH3Q9UHC1 1453 aa10.11□□□□□ -0.79
NEK9-207ENST00000555763 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
NEK9-207ENST00000555763 A2ML1A8K2U0 1454 aa10.1□□□□□ -0.79
NEK9-207ENST00000555763 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
NEK9-207ENST00000555763 ROBO1Q9Y6N7 1651 aa10.09□□□□□ -0.79
NEK9-207ENST00000555763 CDK13Q14004 1512 aaKnown RBP10.07□□□□□ -0.8
NEK9-207ENST00000555763 MED14O60244 1454 aa10.07□□□□□ -0.8
NEK9-207ENST00000555763 ESF1Q9H501 851 aaKnown RBP10.07□□□□□ -0.8
NEK9-207ENST00000555763 KIF14Q15058 1648 aa10.07□□□□□ -0.8
NEK9-207ENST00000555763 EP400Q96L91 3159 aa10.06□□□□□ -0.8
NEK9-207ENST00000555763 ZMYM3Q14202 1370 aa10.06□□□□□ -0.8
NEK9-207ENST00000555763 ABCC1P33527 1531 aa10.06□□□□□ -0.8
NEK9-207ENST00000555763 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
NEK9-207ENST00000555763 PHLPP1O60346 1717 aa10.05□□□□□ -0.8
NEK9-207ENST00000555763 ZNF219Q9P2Y4 722 aaPredicted RBP10.05□□□□□ -0.8
NEK9-207ENST00000555763 SETBP1Q9Y6X0 1596 aa10.05□□□□□ -0.8
NEK9-207ENST00000555763 LRP5O75197 1615 aa10.04□□□□□ -0.8
NEK9-207ENST00000555763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.04□□□□□ -0.8
NEK9-207ENST00000555763 HNRNPUL2Q1KMD3 747 aaKnown RBP10.04□□□□□ -0.8
NEK9-207ENST00000555763 RBM42Q9BTD8 480 aaKnown RBP10.04□□□□□ -0.8
NEK9-207ENST00000555763 CDK12Q9NYV4 1490 aaPredicted RBP10.04□□□□□ -0.8
NEK9-207ENST00000555763 PREX2Q70Z35 1606 aa10.04□□□□□ -0.8
NEK9-207ENST00000555763 PLEKHD1A6NEE1 506 aa10.02□□□□□ -0.81
NEK9-207ENST00000555763 ARHGAP5Q13017 1502 aa10.02□□□□□ -0.81
NEK9-207ENST00000555763 FAM9AQ8IZU1 332 aaPredicted RBP10.01□□□□□ -0.81
NEK9-207ENST00000555763 FAM135BQ49AJ0 1406 aa10□□□□□ -0.81
NEK9-207ENST00000555763 SHPRHQ149N8 1683 aa10□□□□□ -0.81
NEK9-207ENST00000555763 PRXQ9BXM0 1461 aa10□□□□□ -0.81
NEK9-207ENST00000555763 COL16A1Q07092 1604 aaPredicted RBP10□□□□□ -0.81
NEK9-207ENST00000555763 NPHP4O75161 1426 aaPredicted RBP9.99□□□□□ -0.81
NEK9-207ENST00000555763 AFAP1Q8N556 730 aa9.99□□□□□ -0.81
NEK9-207ENST00000555763 LRP6O75581 1613 aa9.99□□□□□ -0.81
NEK9-207ENST00000555763 CDC42BPAQ5VT25 1732 aa9.99□□□□□ -0.81
NEK9-207ENST00000555763 INO80Q9ULG1 1556 aaPredicted RBP9.98□□□□□ -0.81
NEK9-207ENST00000555763 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
NEK9-207ENST00000555763 SAMD9LQ8IVG5 1584 aa9.97□□□□□ -0.81
NEK9-207ENST00000555763 ADGBQ8N7X0 1667 aa9.97□□□□□ -0.81
NEK9-207ENST00000555763 LRRIQ1Q96JM4 1722 aa9.97□□□□□ -0.81
NEK9-207ENST00000555763 EFCAB2Q5VUJ9 269 aa9.97□□□□□ -0.81
NEK9-207ENST00000555763 TRIM52Q96A61 297 aa9.95□□□□□ -0.82
NEK9-207ENST00000555763 UGGT1Q9NYU2 1555 aa9.94□□□□□ -0.82
NEK9-207ENST00000555763 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
NEK9-207ENST00000555763 MAP3K1Q13233 1512 aa9.93□□□□□ -0.82
NEK9-207ENST00000555763 LRRC9Q6ZRR7 1453 aa9.93□□□□□ -0.82
NEK9-207ENST00000555763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.93□□□□□ -0.82
NEK9-207ENST00000555763 KDM5DQ9BY66 1539 aa9.92□□□□□ -0.82
NEK9-207ENST00000555763 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
NEK9-207ENST00000555763 UBR1Q8IWV7 1749 aa9.92□□□□□ -0.82
NEK9-207ENST00000555763 RGS12O14924 1447 aa9.91□□□□□ -0.82
NEK9-207ENST00000555763 JCADQ9P266 1359 aa9.91□□□□□ -0.82
NEK9-207ENST00000555763 IFFO2Q5TF58 517 aa9.91□□□□□ -0.82
NEK9-207ENST00000555763 MYT1LQ9UL68 1186 aa9.91□□□□□ -0.82
NEK9-207ENST00000555763 FAM135AQ9P2D6 1515 aa9.91□□□□□ -0.82
NEK9-207ENST00000555763 PZPP20742 1482 aa9.91□□□□□ -0.82
NEK9-207ENST00000555763 NLRP1Q9C000 1473 aa9.91□□□□□ -0.82
NEK9-207ENST00000555763 TIAM1Q13009 1591 aa9.9□□□□□ -0.82
NEK9-207ENST00000555763 ZNF772Q68DY9 489 aaPredicted RBP9.9□□□□□ -0.82
NEK9-207ENST00000555763 ANKLE2Q86XL3 938 aa9.89□□□□□ -0.83
NEK9-207ENST00000555763 TNRQ92752 1358 aa9.88□□□□□ -0.83
NEK9-207ENST00000555763 NHSL1Q5SYE7 1610 aa9.88□□□□□ -0.83
NEK9-207ENST00000555763 FGD6Q6ZV73 1430 aa9.88□□□□□ -0.83
NEK9-207ENST00000555763 A2MP01023 1474 aa9.87□□□□□ -0.83
NEK9-207ENST00000555763 HAX1O00165 279 aa9.87□□□□□ -0.83
NEK9-207ENST00000555763 SUPT5HO00267 1087 aaKnown RBP9.87□□□□□ -0.83
NEK9-207ENST00000555763 APLP2Q06481 763 aa9.87□□□□□ -0.83
NEK9-207ENST00000555763 SYCP2Q9BX26 1530 aa9.87□□□□□ -0.83
NEK9-207ENST00000555763 KDM5AP29375 1690 aaKnown RBP9.87□□□□□ -0.83
NEK9-207ENST00000555763 PIP4P2Q8N4L2 257 aa9.86□□□□□ -0.83
NEK9-207ENST00000555763 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
NEK9-207ENST00000555763 AHDC1Q5TGY3 1603 aaPredicted RBP9.85□□□□□ -0.83
NEK9-207ENST00000555763 DIP2AQ14689 1571 aa9.85□□□□□ -0.83
NEK9-207ENST00000555763 TROQ12816 1431 aaPredicted RBP9.85□□□□□ -0.83
NEK9-207ENST00000555763 RXRBP28702 533 aa9.85□□□□□ -0.83
NEK9-207ENST00000555763 CFAP65Q6ZU64 1925 aaKnown RBP9.85□□□□□ -0.83
NEK9-207ENST00000555763 SPATA31A6Q5VVP1 1343 aa9.84□□□□□ -0.83
NEK9-207ENST00000555763 NWD1Q149M9 1564 aa9.84□□□□□ -0.83
NEK9-207ENST00000555763 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
NEK9-207ENST00000555763 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
NEK9-207ENST00000555763 THEMISQ8N1K5 641 aaPredicted RBP9.82□□□□□ -0.84
NEK9-207ENST00000555763 SCAF11Q99590 1463 aaKnown RBP9.82□□□□□ -0.84
NEK9-207ENST00000555763 EVX2Q03828 476 aa9.81□□□□□ -0.84
NEK9-207ENST00000555763 ABCC3O15438 1527 aa9.81□□□□□ -0.84
NEK9-207ENST00000555763 SLIT1O75093 1534 aa9.81□□□□□ -0.84
NEK9-207ENST00000555763 ATAD2Q6PL18 1390 aa9.8□□□□□ -0.84
NEK9-207ENST00000555763 PRDM15P57071 1507 aaPredicted RBP9.8□□□□□ -0.84
NEK9-207ENST00000555763 CLIP1P30622 1438 aa9.8□□□□□ -0.84
NEK9-207ENST00000555763 MIA2Q96PC5 1412 aa9.8□□□□□ -0.84
NEK9-207ENST00000555763 ARHGAP23Q9P227 1491 aa9.79□□□□□ -0.84
NEK9-207ENST00000555763 TMEM94Q12767 1356 aa9.79□□□□□ -0.84
NEK9-207ENST00000555763 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
NEK9-207ENST00000555763 NKTRP30414 1462 aaKnown RBP9.79□□□□□ -0.84
NEK9-207ENST00000555763 CHD2O14647 1828 aaKnown RBP9.78□□□□□ -0.84
NEK9-207ENST00000555763 POLA2Q14181 598 aa9.78□□□□□ -0.84
NEK9-207ENST00000555763 MEX3CQ5U5Q3 659 aaKnown RBP9.78□□□□□ -0.84
NEK9-207ENST00000555763 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
NEK9-207ENST00000555763 GGT6Q6P531 493 aa9.77□□□□□ -0.85
NEK9-207ENST00000555763 CEP350Q5VT06 3117 aa9.77□□□□□ -0.85
NEK9-207ENST00000555763 PRKCSHP14314 528 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms