RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 ANKRD30AQ9BXX3 1397 aa14.34□□□□□ -0.11
SIX1-204ENST00000555627 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.12
SIX1-204ENST00000555627 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.12
SIX1-204ENST00000555627 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.12
SIX1-204ENST00000555627 KIF15Q9NS87 1388 aa14.33□□□□□ -0.12
SIX1-204ENST00000555627 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
SIX1-204ENST00000555627 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
SIX1-204ENST00000555627 RRP7BPQ9NSQ0 103 aa14.32□□□□□ -0.12
SIX1-204ENST00000555627 IQSEC2Q5JU85 1478 aa14.31□□□□□ -0.12
SIX1-204ENST00000555627 PLPPR3Q6T4P5 718 aa14.31□□□□□ -0.12
SIX1-204ENST00000555627 ANKRD50Q9ULJ7 1429 aa14.31□□□□□ -0.12
SIX1-204ENST00000555627 ARID4BQ4LE39 1312 aaPredicted RBP14.3□□□□□ -0.12
SIX1-204ENST00000555627 ERBINQ96RT1 1412 aa14.3□□□□□ -0.12
SIX1-204ENST00000555627 YEATS2Q9ULM3 1422 aa14.3□□□□□ -0.12
SIX1-204ENST00000555627 SIGLEC1Q9BZZ2 1709 aa14.29□□□□□ -0.12
SIX1-204ENST00000555627 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
SIX1-204ENST00000555627 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
SIX1-204ENST00000555627 VWDEQ8N2E2 1590 aa14.28□□□□□ -0.12
SIX1-204ENST00000555627 CCER1Q8TC90 406 aaPredicted RBP14.28□□□□□ -0.12
SIX1-204ENST00000555627 MLH3Q9UHC1 1453 aa14.28□□□□□ -0.12
SIX1-204ENST00000555627 CEP152O94986 1710 aa14.27□□□□□ -0.13
SIX1-204ENST00000555627 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
SIX1-204ENST00000555627 ARHGEF40Q8TER5 1519 aa14.26□□□□□ -0.13
SIX1-204ENST00000555627 RSPH4AQ5TD94 716 aa14.26□□□□□ -0.13
SIX1-204ENST00000555627 STRCQ7RTU9 1775 aa14.26□□□□□ -0.13
SIX1-204ENST00000555627 CLSPNQ9HAW4 1339 aa14.25□□□□□ -0.13
SIX1-204ENST00000555627 FAM135AQ9P2D6 1515 aa14.25□□□□□ -0.13
SIX1-204ENST00000555627 TET3O43151 1660 aa14.24□□□□□ -0.13
SIX1-204ENST00000555627 REREQ9P2R6 1566 aa14.24□□□□□ -0.13
SIX1-204ENST00000555627 E9PCH4 1651 aa14.23□□□□□ -0.13
SIX1-204ENST00000555627 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
SIX1-204ENST00000555627 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.14
SIX1-204ENST00000555627 SPAG9O60271 1321 aaKnown RBP14.2□□□□□ -0.14
SIX1-204ENST00000555627 TSPY4P0CV99 314 aa14.2□□□□□ -0.14
SIX1-204ENST00000555627 TSPY10P0CW01 314 aa14.2□□□□□ -0.14
SIX1-204ENST00000555627 A2MP01023 1474 aa14.19□□□□□ -0.14
SIX1-204ENST00000555627 ZC3H13Q5T200 1668 aaKnown RBP14.19□□□□□ -0.14
SIX1-204ENST00000555627 PTPRTO14522 1441 aa14.18□□□□□ -0.14
SIX1-204ENST00000555627 PREX1Q8TCU6 1659 aa14.18□□□□□ -0.14
SIX1-204ENST00000555627 UBAP1LF5GYI3 381 aa14.18□□□□□ -0.14
SIX1-204ENST00000555627 ZEB1P37275 1124 aaPredicted RBP14.17□□□□□ -0.14
SIX1-204ENST00000555627 EFCAB6Q5THR3 1501 aa14.16□□□□□ -0.14
SIX1-204ENST00000555627 CAMSAP1Q5T5Y3 1602 aa14.16□□□□□ -0.14
SIX1-204ENST00000555627 RAPGEF3O95398 923 aa14.16□□□□□ -0.14
SIX1-204ENST00000555627 PIAS4Q8N2W9 510 aaPredicted RBP14.16□□□□□ -0.14
SIX1-204ENST00000555627 LMTK2Q8IWU2 1503 aa14.15□□□□□ -0.14
SIX1-204ENST00000555627 DHX29Q7Z478 1369 aaKnown RBP14.13□□□□□ -0.15
SIX1-204ENST00000555627 ANKRD30BQ9BXX2 1392 aa14.12□□□□□ -0.15
SIX1-204ENST00000555627 AGLP35573 1532 aa14.12□□□□□ -0.15
SIX1-204ENST00000555627 HSPA1LP34931 641 aa14.12□□□□□ -0.15
SIX1-204ENST00000555627 ACIN1Q9UKV3 1341 aaKnown RBP14.12□□□□□ -0.15
SIX1-204ENST00000555627 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
SIX1-204ENST00000555627 ABCC3O15438 1527 aa14.11□□□□□ -0.15
SIX1-204ENST00000555627 TRPM2O94759 1503 aa14.1□□□□□ -0.15
SIX1-204ENST00000555627 MPHOSPH9Q99550 1183 aa14.1□□□□□ -0.15
SIX1-204ENST00000555627 CLTCL1P53675 1640 aa14.1□□□□□ -0.15
SIX1-204ENST00000555627 NUP155O75694 1391 aa14.09□□□□□ -0.15
SIX1-204ENST00000555627 ATP10AO60312 1499 aa14.09□□□□□ -0.15
SIX1-204ENST00000555627 PLA2R1Q13018 1463 aa14.09□□□□□ -0.15
SIX1-204ENST00000555627 MROH2AA6NES4 1674 aa14.09□□□□□ -0.15
SIX1-204ENST00000555627 TRIM52Q96A61 297 aa14.08□□□□□ -0.16
SIX1-204ENST00000555627 IFT172Q9UG01 1749 aa14.07□□□□□ -0.16
SIX1-204ENST00000555627 FER1L4A9Z1Z3 1794 aa14.07□□□□□ -0.16
SIX1-204ENST00000555627 SRCAPQ6ZRS2 3230 aa14.06□□□□□ -0.16
SIX1-204ENST00000555627 CLTCQ00610 1675 aaKnown RBP14.06□□□□□ -0.16
SIX1-204ENST00000555627 UHRF1BP1Q6BDS2 1440 aa14.06□□□□□ -0.16
SIX1-204ENST00000555627 PIK3C2BO00750 1634 aa14.05□□□□□ -0.16
SIX1-204ENST00000555627 SIN3AQ96ST3 1273 aa14.05□□□□□ -0.16
SIX1-204ENST00000555627 CFAP65Q6ZU64 1925 aaKnown RBP14.04□□□□□ -0.16
SIX1-204ENST00000555627 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
SIX1-204ENST00000555627 SYNMO15061 1565 aa14.04□□□□□ -0.16
SIX1-204ENST00000555627 KIF1BO60333 1816 aa14.03□□□□□ -0.16
SIX1-204ENST00000555627 NEURL4Q96JN8 1562 aa14.02□□□□□ -0.16
SIX1-204ENST00000555627 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
SIX1-204ENST00000555627 MYO5BQ9ULV0 1848 aa14.01□□□□□ -0.17
SIX1-204ENST00000555627 UGGT1Q9NYU2 1555 aa14.01□□□□□ -0.17
SIX1-204ENST00000555627 PKD2Q13563 968 aa14.01□□□□□ -0.17
SIX1-204ENST00000555627 MLECQ14165 292 aa14.01□□□□□ -0.17
SIX1-204ENST00000555627 CEBPAP49715 358 aaPredicted RBP13.99□□□□□ -0.17
SIX1-204ENST00000555627 NPATQ14207 1427 aa13.98□□□□□ -0.17
SIX1-204ENST00000555627 ZNF335Q9H4Z2 1342 aaPredicted RBP13.98□□□□□ -0.17
SIX1-204ENST00000555627 KIF3BO15066 747 aa13.98□□□□□ -0.17
SIX1-204ENST00000555627 ADGRB3O60242 1522 aa13.98□□□□□ -0.17
SIX1-204ENST00000555627 PIP4K2BP78356 416 aa13.97□□□□□ -0.17
SIX1-204ENST00000555627 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
SIX1-204ENST00000555627 KANK1Q14678 1352 aa13.96□□□□□ -0.17
SIX1-204ENST00000555627 PPLO60437 1756 aa13.96□□□□□ -0.17
SIX1-204ENST00000555627 RGS17Q9UGC6 210 aaPredicted RBP13.96□□□□□ -0.17
SIX1-204ENST00000555627 TONSLQ96HA7 1378 aa13.96□□□□□ -0.18
SIX1-204ENST00000555627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.18
SIX1-204ENST00000555627 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
SIX1-204ENST00000555627 ARHGAP31Q2M1Z3 1444 aa13.95□□□□□ -0.18
SIX1-204ENST00000555627 SPATA31E1Q6ZUB1 1445 aa13.95□□□□□ -0.18
SIX1-204ENST00000555627 POLR1AO95602 1720 aaPredicted RBP13.94□□□□□ -0.18
SIX1-204ENST00000555627 NOS1P29475 1434 aa13.94□□□□□ -0.18
SIX1-204ENST00000555627 CCDC144AA2RUR9 1427 aa13.93□□□□□ -0.18
SIX1-204ENST00000555627 NEUROD1Q13562 356 aa13.93□□□□□ -0.18
SIX1-204ENST00000555627 TIMELESSQ9UNS1 1208 aa13.93□□□□□ -0.18
SIX1-204ENST00000555627 C3P01024 1663 aa13.92□□□□□ -0.18
SIX1-204ENST00000555627 LAMC1P11047 1609 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms