RNA–Protein interactions for RNA: ENST00000555561.5

SDR39U1-213, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 452 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-213ENST00000555561 STAC3Q96MF2 364 aa16.27■□□□□ 0.2
SDR39U1-213ENST00000555561 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.19
SDR39U1-213ENST00000555561 CD109Q6YHK3 1445 aa16.27■□□□□ 0.19
SDR39U1-213ENST00000555561 SPAG9O60271 1321 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-213ENST00000555561 ATP7AQ04656 1500 aa16.26■□□□□ 0.19
SDR39U1-213ENST00000555561 ADGRL1O94910 1474 aa16.26■□□□□ 0.19
SDR39U1-213ENST00000555561 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-213ENST00000555561 NEO1Q92859 1461 aa16.25■□□□□ 0.19
SDR39U1-213ENST00000555561 POLR1AO95602 1720 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-213ENST00000555561 CCDC144AA2RUR9 1427 aa16.24■□□□□ 0.19
SDR39U1-213ENST00000555561 NEURL4Q96JN8 1562 aa16.24■□□□□ 0.19
SDR39U1-213ENST00000555561 TRAPPC8Q9Y2L5 1435 aa16.23■□□□□ 0.19
SDR39U1-213ENST00000555561 KANK1Q14678 1352 aa16.22■□□□□ 0.19
SDR39U1-213ENST00000555561 RALGAPBQ86X10 1494 aa16.22■□□□□ 0.19
SDR39U1-213ENST00000555561 KDM5CP41229 1560 aa16.21■□□□□ 0.18
SDR39U1-213ENST00000555561 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
SDR39U1-213ENST00000555561 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
SDR39U1-213ENST00000555561 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
SDR39U1-213ENST00000555561 TET3O43151 1660 aa16.19■□□□□ 0.18
SDR39U1-213ENST00000555561 VWDEQ8N2E2 1590 aa16.19■□□□□ 0.18
SDR39U1-213ENST00000555561 MLH3Q9UHC1 1453 aa16.19■□□□□ 0.18
SDR39U1-213ENST00000555561 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
SDR39U1-213ENST00000555561 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
SDR39U1-213ENST00000555561 DHX29Q7Z478 1369 aaKnown RBP16.18■□□□□ 0.18
SDR39U1-213ENST00000555561 LAMC1P11047 1609 aa16.18■□□□□ 0.18
SDR39U1-213ENST00000555561 ANP32CO43423 234 aa16.16■□□□□ 0.18
SDR39U1-213ENST00000555561 FOXD1Q16676 465 aa16.16■□□□□ 0.18
SDR39U1-213ENST00000555561 POGZQ7Z3K3 1410 aa16.16■□□□□ 0.18
SDR39U1-213ENST00000555561 TRPM2O94759 1503 aa16.15■□□□□ 0.18
SDR39U1-213ENST00000555561 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
SDR39U1-213ENST00000555561 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-213ENST00000555561 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-213ENST00000555561 RNF17Q9BXT8 1623 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-213ENST00000555561 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
SDR39U1-213ENST00000555561 PTPRTO14522 1441 aa16.12■□□□□ 0.17
SDR39U1-213ENST00000555561 KIDINS220Q9ULH0 1771 aa16.11■□□□□ 0.17
SDR39U1-213ENST00000555561 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
SDR39U1-213ENST00000555561 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
SDR39U1-213ENST00000555561 GPRASP1Q5JY77 1395 aa16.1■□□□□ 0.17
SDR39U1-213ENST00000555561 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
SDR39U1-213ENST00000555561 SPHKAPQ2M3C7 1700 aa16.09■□□□□ 0.17
SDR39U1-213ENST00000555561 NBPF8Q3BBV2 869 aa16.09■□□□□ 0.17
SDR39U1-213ENST00000555561 CCDC7Q96M83 1385 aa16.09■□□□□ 0.17
SDR39U1-213ENST00000555561 A2MP01023 1474 aa16.09■□□□□ 0.17
SDR39U1-213ENST00000555561 AFAP1Q8N556 730 aa16.08■□□□□ 0.16
SDR39U1-213ENST00000555561 USP47Q96K76 1375 aa16.08■□□□□ 0.16
SDR39U1-213ENST00000555561 PRAG1Q86YV5 1406 aa16.08■□□□□ 0.16
SDR39U1-213ENST00000555561 E9PCH4 1651 aa16.08■□□□□ 0.16
SDR39U1-213ENST00000555561 CEP152O94986 1710 aa16.08■□□□□ 0.16
SDR39U1-213ENST00000555561 TRPM1Q7Z4N2 1603 aa16.07■□□□□ 0.16
SDR39U1-213ENST00000555561 EFCAB6Q5THR3 1501 aa16.06■□□□□ 0.16
SDR39U1-213ENST00000555561 MROH1Q8NDA8 1641 aa16.05■□□□□ 0.16
SDR39U1-213ENST00000555561 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
SDR39U1-213ENST00000555561 SLC24A1O60721 1099 aa16.05■□□□□ 0.16
SDR39U1-213ENST00000555561 RAPGEF3O95398 923 aa16.04■□□□□ 0.16
SDR39U1-213ENST00000555561 ZC3H13Q5T200 1668 aaKnown RBP16.03■□□□□ 0.16
SDR39U1-213ENST00000555561 ZMYM4Q5VZL5 1548 aa16.03■□□□□ 0.16
SDR39U1-213ENST00000555561 KTN1Q86UP2 1357 aaKnown RBP16.02■□□□□ 0.16
SDR39U1-213ENST00000555561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.166e-6■□□□□ 8.3
SDR39U1-213ENST00000555561 DCAF11Q8TEB1 546 aa16.01■□□□□ 0.15
SDR39U1-213ENST00000555561 KIAA1210Q9ULL0 1709 aa16.01■□□□□ 0.15
SDR39U1-213ENST00000555561 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
SDR39U1-213ENST00000555561 MYOM2P54296 1465 aa15.99■□□□□ 0.15
SDR39U1-213ENST00000555561 REREQ9P2R6 1566 aa15.99■□□□□ 0.15
SDR39U1-213ENST00000555561 RICTORQ6R327 1708 aa15.99■□□□□ 0.15
SDR39U1-213ENST00000555561 KIF3BO15066 747 aa15.98■□□□□ 0.15
SDR39U1-213ENST00000555561 ARHGAP31Q2M1Z3 1444 aa15.97■□□□□ 0.15
SDR39U1-213ENST00000555561 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
SDR39U1-213ENST00000555561 ABCA6Q8N139 1617 aa15.97■□□□□ 0.15
SDR39U1-213ENST00000555561 KIF7Q2M1P5 1343 aa15.96■□□□□ 0.15
SDR39U1-213ENST00000555561 FRMPD1Q5SYB0 1578 aa15.96■□□□□ 0.15
SDR39U1-213ENST00000555561 DIP2CQ9Y2E4 1556 aa15.96■□□□□ 0.14
SDR39U1-213ENST00000555561 CLTCL1P53675 1640 aa15.95■□□□□ 0.14
SDR39U1-213ENST00000555561 MADDQ8WXG6 1647 aa15.95■□□□□ 0.14
SDR39U1-213ENST00000555561 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
SDR39U1-213ENST00000555561 KIF1BO60333 1816 aa15.95■□□□□ 0.14
SDR39U1-213ENST00000555561 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
SDR39U1-213ENST00000555561 HIRIP3Q9BW71 556 aaPredicted RBP15.93■□□□□ 0.14
SDR39U1-213ENST00000555561 EIF3AQ14152 1382 aaKnown RBP15.92■□□□□ 0.14
SDR39U1-213ENST00000555561 RPGRIP1LQ68CZ1 1315 aa15.92■□□□□ 0.14
SDR39U1-213ENST00000555561 WASHC2CQ9Y4E1 1318 aa15.92■□□□□ 0.14
SDR39U1-213ENST00000555561 AGLP35573 1532 aa15.91■□□□□ 0.14
SDR39U1-213ENST00000555561 ZNF326Q5BKZ1 582 aaKnown RBP15.91■□□□□ 0.14
SDR39U1-213ENST00000555561 ABCC3O15438 1527 aa15.9■□□□□ 0.14
SDR39U1-213ENST00000555561 CDCA8Q53HL2 280 aa15.9■□□□□ 0.14
SDR39U1-213ENST00000555561 ADGRB3O60242 1522 aa15.89■□□□□ 0.13
SDR39U1-213ENST00000555561 CAMSAP1Q5T5Y3 1602 aa15.89■□□□□ 0.13
SDR39U1-213ENST00000555561 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
SDR39U1-213ENST00000555561 IFT172Q9UG01 1749 aa15.88■□□□□ 0.13
SDR39U1-213ENST00000555561 PRKRIP1Q9H875 184 aaPredicted RBP15.88■□□□□ 0.13
SDR39U1-213ENST00000555561 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
SDR39U1-213ENST00000555561 NRXN1Q9ULB1 1477 aa15.88■□□□□ 0.13
SDR39U1-213ENST00000555561 IQGAP1P46940 1657 aa15.88■□□□□ 0.13
SDR39U1-213ENST00000555561 SCAF11Q99590 1463 aaKnown RBP15.87■□□□□ 0.13
SDR39U1-213ENST00000555561 ARHGEF40Q8TER5 1519 aa15.87■□□□□ 0.13
SDR39U1-213ENST00000555561 SETBP1Q9Y6X0 1596 aa15.87■□□□□ 0.13
SDR39U1-213ENST00000555561 NOS1P29475 1434 aa15.86■□□□□ 0.13
SDR39U1-213ENST00000555561 ADAMTSL3P82987 1691 aa15.86■□□□□ 0.13
SDR39U1-213ENST00000555561 NPATQ14207 1427 aa15.85■□□□□ 0.13
SDR39U1-213ENST00000555561 RGL3Q3MIN7 710 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms