RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 DPYSL4O14531 572 aa9.83□□□□□ -0.84
KTN1-222ENST00000555506 THSD4Q6ZMP0 1018 aa9.83□□□□□ -0.84
KTN1-222ENST00000555506 ZNF775Q96BV0 537 aaPredicted RBP9.83□□□□□ -0.84
KTN1-222ENST00000555506 EVI5O60447 810 aa9.82□□□□□ -0.84
KTN1-222ENST00000555506 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
KTN1-222ENST00000555506 ZNF787Q6DD87 383 aa9.79□□□□□ -0.84
KTN1-222ENST00000555506 ANO8Q9HCE9 1232 aaPredicted RBP9.79□□□□□ -0.84
KTN1-222ENST00000555506 VPS9D1Q9Y2B5 631 aa9.79□□□□□ -0.84
KTN1-222ENST00000555506 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
KTN1-222ENST00000555506 WNT2BQ93097 391 aa9.78□□□□□ -0.84
KTN1-222ENST00000555506 KCNK17Q96T54 332 aa9.78□□□□□ -0.84
KTN1-222ENST00000555506 ARIH1Q9Y4X5 557 aaPredicted RBP9.77□□□□□ -0.85
KTN1-222ENST00000555506 PDIA6Q15084 440 aa9.74□□□□□ -0.85
KTN1-222ENST00000555506 SLC4A5Q9BY07 1137 aa9.74□□□□□ -0.85
KTN1-222ENST00000555506 NBR1Q14596 966 aa9.73□□□□□ -0.85
KTN1-222ENST00000555506 TPRNQ4KMQ1 711 aa9.73□□□□□ -0.85
KTN1-222ENST00000555506 GFRA3O60609 400 aa9.72□□□□□ -0.85
KTN1-222ENST00000555506 FOSBP53539 338 aa9.72□□□□□ -0.85
KTN1-222ENST00000555506 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
KTN1-222ENST00000555506 ZNF454Q8N9F8 522 aa9.72□□□□□ -0.85
KTN1-222ENST00000555506 ITGBL1O95965 494 aaPredicted RBP9.71□□□□□ -0.86
KTN1-222ENST00000555506 ARHGEF1Q92888 912 aaKnown RBP9.71□□□□□ -0.86
KTN1-222ENST00000555506 SPDYE16A6NNV3 312 aaPredicted RBP9.7□□□□□ -0.86
KTN1-222ENST00000555506 JPH4Q96JJ6 628 aa9.7□□□□□ -0.86
KTN1-222ENST00000555506 PCDHGA10Q9Y5H3 936 aa9.7□□□□□ -0.86
KTN1-222ENST00000555506 P3H3Q8IVL6 736 aa9.69□□□□□ -0.86
KTN1-222ENST00000555506 DDX12PQ92771 950 aa9.68□□□□□ -0.86
KTN1-222ENST00000555506 BHMG1C9JSJ3 638 aaPredicted RBP9.66□□□□□ -0.86
KTN1-222ENST00000555506 PHF14O94880 888 aa9.66□□□□□ -0.86
KTN1-222ENST00000555506 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
KTN1-222ENST00000555506 ADAM33Q9BZ11 813 aa9.66□□□□□ -0.86
KTN1-222ENST00000555506 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
KTN1-222ENST00000555506 BCL2L12Q9HB09 334 aa9.64□□□□□ -0.87
KTN1-222ENST00000555506 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
KTN1-222ENST00000555506 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
KTN1-222ENST00000555506 NRG2O14511 850 aaPredicted RBP9.61□□□□□ -0.87
KTN1-222ENST00000555506 KCNC4Q03721 635 aa9.61□□□□□ -0.87
KTN1-222ENST00000555506 NYAP1Q6ZVC0 841 aa9.61□□□□□ -0.87
KTN1-222ENST00000555506 EPAS1Q99814 870 aa9.61□□□□□ -0.87
KTN1-222ENST00000555506 MLLT3P42568 568 aaPredicted RBP9.6□□□□□ -0.87
KTN1-222ENST00000555506 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
KTN1-222ENST00000555506 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
KTN1-222ENST00000555506 SEMA3EO15041 775 aa9.59□□□□□ -0.87
KTN1-222ENST00000555506 PTPREP23469 700 aa9.59□□□□□ -0.87
KTN1-222ENST00000555506 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
KTN1-222ENST00000555506 OSBPP22059 807 aa9.58□□□□□ -0.88
KTN1-222ENST00000555506 ANKK1Q8NFD2 765 aa9.58□□□□□ -0.88
KTN1-222ENST00000555506 EN1Q05925 392 aaPredicted RBP9.57□□□□□ -0.88
KTN1-222ENST00000555506 C6orf132Q5T0Z8 1188 aa9.56□□□□□ -0.88
KTN1-222ENST00000555506 COL9A1P20849 921 aa9.55□□□□□ -0.88
KTN1-222ENST00000555506 TSR1Q2NL82 804 aaKnown RBP9.55□□□□□ -0.88
KTN1-222ENST00000555506 ZBED2Q9BTP6 218 aa9.55□□□□□ -0.88
KTN1-222ENST00000555506 MAP3K7O43318 606 aa9.54□□□□□ -0.88
KTN1-222ENST00000555506 TESPA1A2RU30 521 aaPredicted RBP9.53□□□□□ -0.88
KTN1-222ENST00000555506 PPP1R3GB7ZBB8 358 aa9.52□□□□□ -0.89
KTN1-222ENST00000555506 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
KTN1-222ENST00000555506 PROX2Q3B8N5 592 aa9.49□□□□□ -0.89
KTN1-222ENST00000555506 STK17AQ9UEE5 414 aa9.48□□□□□ -0.89
KTN1-222ENST00000555506 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
KTN1-222ENST00000555506 TREML4Q6UXN2 200 aa9.45□□□□□ -0.9
KTN1-222ENST00000555506 NPDC1Q9NQX5 325 aaPredicted RBP9.45□□□□□ -0.9
KTN1-222ENST00000555506 RBM26Q5T8P6 1007 aaKnown RBP9.44□□□□□ -0.9
KTN1-222ENST00000555506 LCE2AQ5TA79 106 aaPredicted RBP9.44□□□□□ -0.9
KTN1-222ENST00000555506 PRKD2Q9BZL6 878 aa9.44□□□□□ -0.9
KTN1-222ENST00000555506 RABGEF1Q9UJ41 708 aa9.44□□□□□ -0.9
KTN1-222ENST00000555506 BCAMP50895 628 aa9.43□□□□□ -0.9
KTN1-222ENST00000555506 LAPTM4BQ86VI4 370 aa9.43□□□□□ -0.9
KTN1-222ENST00000555506 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
KTN1-222ENST00000555506 TSKSQ9UJT2 592 aa9.42□□□□□ -0.9
KTN1-222ENST00000555506 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
KTN1-222ENST00000555506 SMYD5Q6GMV2 418 aa9.41□□□□□ -0.9
KTN1-222ENST00000555506 CERKQ8TCT0 537 aa9.41□□□□□ -0.9
KTN1-222ENST00000555506 CDCA7LQ96GN5 454 aa9.41□□□□□ -0.9
KTN1-222ENST00000555506 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
KTN1-222ENST00000555506 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
KTN1-222ENST00000555506 NUTM2FA1L443 756 aa9.4□□□□□ -0.9
KTN1-222ENST00000555506 PRSS12P56730 875 aa9.4□□□□□ -0.9
KTN1-222ENST00000555506 PTGDRQ13258 359 aa9.4□□□□□ -0.91
KTN1-222ENST00000555506 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
KTN1-222ENST00000555506 PDZRN3Q9UPQ7 1066 aa9.39□□□□□ -0.91
KTN1-222ENST00000555506 WBP1LQ9NX94 342 aa9.38□□□□□ -0.91
KTN1-222ENST00000555506 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
KTN1-222ENST00000555506 PADI6Q6TGC4 694 aa9.37□□□□□ -0.91
KTN1-222ENST00000555506 SEPT9Q9UHD8 586 aaPredicted RBP9.36□□□□□ -0.91
KTN1-222ENST00000555506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.35□□□□□ -0.91
KTN1-222ENST00000555506 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
KTN1-222ENST00000555506 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
KTN1-222ENST00000555506 GPR37O15354 613 aa9.34□□□□□ -0.91
KTN1-222ENST00000555506 LMOD2Q6P5Q4 547 aa9.34□□□□□ -0.91
KTN1-222ENST00000555506 PACS2Q86VP3 889 aa9.34□□□□□ -0.91
KTN1-222ENST00000555506 ZFRQ96KR1 1074 aaKnown RBP9.34□□□□□ -0.91
KTN1-222ENST00000555506 SMAPO00193 183 aa9.34□□□□□ -0.91
KTN1-222ENST00000555506 FCHSD2O94868 740 aa9.34□□□□□ -0.91
KTN1-222ENST00000555506 TSR3Q9UJK0 312 aaKnown RBP9.34□□□□□ -0.91
KTN1-222ENST00000555506 TULP1O00294 542 aaPredicted RBP9.33□□□□□ -0.92
KTN1-222ENST00000555506 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
KTN1-222ENST00000555506 NUDT18Q6ZVK8 323 aa9.31□□□□□ -0.92
KTN1-222ENST00000555506 TATDN2Q93075 761 aa9.31□□□□□ -0.92
KTN1-222ENST00000555506 PNMA3Q9UL41 463 aa9.31□□□□□ -0.92
KTN1-222ENST00000555506 FECHP22830 423 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms