RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 CCDC144AA2RUR9 1427 aa13.58□□□□□ -0.24
RPGRIP1-208ENST00000555489 IQGAP3Q86VI3 1631 aa13.55□□□□□ -0.24
RPGRIP1-208ENST00000555489 DCAF11Q8TEB1 546 aa13.55□□□□□ -0.24
RPGRIP1-208ENST00000555489 DUOX2Q9NRD8 1548 aa13.54□□□□□ -0.24
RPGRIP1-208ENST00000555489 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
RPGRIP1-208ENST00000555489 ERBINQ96RT1 1412 aa13.53□□□□□ -0.24
RPGRIP1-208ENST00000555489 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
RPGRIP1-208ENST00000555489 MAGI2Q86UL8 1455 aa13.53□□□□□ -0.24
RPGRIP1-208ENST00000555489 LAMC1P11047 1609 aa13.53□□□□□ -0.24
RPGRIP1-208ENST00000555489 PPP4R2Q9NY27 417 aa13.52□□□□□ -0.24
RPGRIP1-208ENST00000555489 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.24
RPGRIP1-208ENST00000555489 ATP10AO60312 1499 aa13.52□□□□□ -0.24
RPGRIP1-208ENST00000555489 POLR3GLQ9BT43 218 aa13.52□□□□□ -0.25
RPGRIP1-208ENST00000555489 E9PCH4 1651 aa13.51□□□□□ -0.25
RPGRIP1-208ENST00000555489 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
RPGRIP1-208ENST00000555489 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
RPGRIP1-208ENST00000555489 KDM2AQ9Y2K7 1162 aa13.51□□□□□ -0.25
RPGRIP1-208ENST00000555489 EIF2AK4Q9P2K8 1649 aaKnown RBP13.51□□□□□ -0.25
RPGRIP1-208ENST00000555489 GPRASP1Q5JY77 1395 aa13.51□□□□□ -0.25
RPGRIP1-208ENST00000555489 PLCH2O75038 1416 aa13.51□□□□□ -0.25
RPGRIP1-208ENST00000555489 RBM19Q9Y4C8 960 aaKnown RBP13.51□□□□□ -0.25
RPGRIP1-208ENST00000555489 RALBP1Q15311 655 aa13.49□□□□□ -0.25
RPGRIP1-208ENST00000555489 BRD4O60885 1362 aaPredicted RBP13.49□□□□□ -0.25
RPGRIP1-208ENST00000555489 PLA2R1Q13018 1463 aa13.49□□□□□ -0.25
RPGRIP1-208ENST00000555489 ERCC6L2Q5T890 1561 aa13.48□□□□□ -0.25
RPGRIP1-208ENST00000555489 ZCCHC11Q5TAX3 1644 aaKnown RBP13.48□□□□□ -0.25
RPGRIP1-208ENST00000555489 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
RPGRIP1-208ENST00000555489 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
RPGRIP1-208ENST00000555489 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
RPGRIP1-208ENST00000555489 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
RPGRIP1-208ENST00000555489 A2MP01023 1474 aa13.47□□□□□ -0.25
RPGRIP1-208ENST00000555489 ABCC1P33527 1531 aa13.47□□□□□ -0.25
RPGRIP1-208ENST00000555489 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
RPGRIP1-208ENST00000555489 PNISRQ8TF01 805 aaKnown RBP13.47□□□□□ -0.25
RPGRIP1-208ENST00000555489 ARAP3Q8WWN8 1544 aa13.47□□□□□ -0.25
RPGRIP1-208ENST00000555489 PRDM15P57071 1507 aaPredicted RBP13.46□□□□□ -0.25
RPGRIP1-208ENST00000555489 NUDCQ9Y266 331 aa13.46□□□□□ -0.26
RPGRIP1-208ENST00000555489 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
RPGRIP1-208ENST00000555489 ANP32EQ9BTT0 268 aa13.45□□□□□ -0.26
RPGRIP1-208ENST00000555489 WASHC2CQ9Y4E1 1318 aa13.44□□□□□ -0.26
RPGRIP1-208ENST00000555489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPGRIP1-208ENST00000555489 COL17A1Q9UMD9 1497 aaPredicted RBP13.44□□□□□ -0.26
RPGRIP1-208ENST00000555489 RTEL1-TNFRSF6BF6WH68 1400 aa13.44□□□□□ -0.26
RPGRIP1-208ENST00000555489 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
RPGRIP1-208ENST00000555489 PARD3Q8TEW0 1356 aa13.42□□□□□ -0.26
RPGRIP1-208ENST00000555489 RGL3Q3MIN7 710 aa13.42□□□□□ -0.26
RPGRIP1-208ENST00000555489 RNF17Q9BXT8 1623 aaKnown RBP13.41□□□□□ -0.26
RPGRIP1-208ENST00000555489 NLRP13Q86W25 1043 aa13.4□□□□□ -0.26
RPGRIP1-208ENST00000555489 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
RPGRIP1-208ENST00000555489 CNGB1Q14028 1251 aaPredicted RBP13.4□□□□□ -0.26
RPGRIP1-208ENST00000555489 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
RPGRIP1-208ENST00000555489 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
RPGRIP1-208ENST00000555489 TRAPPC8Q9Y2L5 1435 aa13.39□□□□□ -0.27
RPGRIP1-208ENST00000555489 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
RPGRIP1-208ENST00000555489 INSRP06213 1382 aa13.39□□□□□ -0.27
RPGRIP1-208ENST00000555489 NBPF1Q3BBV0 1214 aa13.39□□□□□ -0.27
RPGRIP1-208ENST00000555489 TRPM2O94759 1503 aa13.38□□□□□ -0.27
RPGRIP1-208ENST00000555489 SPAG9O60271 1321 aaKnown RBP13.38□□□□□ -0.27
RPGRIP1-208ENST00000555489 TMF1P82094 1093 aa13.37□□□□□ -0.27
RPGRIP1-208ENST00000555489 TESK2Q96S53 571 aa13.37□□□□□ -0.27
RPGRIP1-208ENST00000555489 DEPDC5O75140 1603 aa13.37□□□□□ -0.27
RPGRIP1-208ENST00000555489 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
RPGRIP1-208ENST00000555489 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
RPGRIP1-208ENST00000555489 WDR7Q9Y4E6 1490 aa13.35□□□□□ -0.27
RPGRIP1-208ENST00000555489 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
RPGRIP1-208ENST00000555489 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
RPGRIP1-208ENST00000555489 PTPRTO14522 1441 aa13.35□□□□□ -0.27
RPGRIP1-208ENST00000555489 CEP152O94986 1710 aa13.34□□□□□ -0.27
RPGRIP1-208ENST00000555489 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
RPGRIP1-208ENST00000555489 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
RPGRIP1-208ENST00000555489 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
RPGRIP1-208ENST00000555489 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
RPGRIP1-208ENST00000555489 TET3O43151 1660 aa13.34□□□□□ -0.27
RPGRIP1-208ENST00000555489 INO80Q9ULG1 1556 aaPredicted RBP13.33□□□□□ -0.28
RPGRIP1-208ENST00000555489 KANK1Q14678 1352 aa13.33□□□□□ -0.28
RPGRIP1-208ENST00000555489 SCAPERQ9BY12 1400 aa13.32□□□□□ -0.28
RPGRIP1-208ENST00000555489 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
RPGRIP1-208ENST00000555489 IQGAP1P46940 1657 aa13.32□□□□□ -0.28
RPGRIP1-208ENST00000555489 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
RPGRIP1-208ENST00000555489 FANCAO15360 1455 aa13.31□□□□□ -0.28
RPGRIP1-208ENST00000555489 VWDEQ8N2E2 1590 aa13.31□□□□□ -0.28
RPGRIP1-208ENST00000555489 SCAF11Q99590 1463 aaKnown RBP13.3□□□□□ -0.28
RPGRIP1-208ENST00000555489 AFAP1Q8N556 730 aa13.3□□□□□ -0.28
RPGRIP1-208ENST00000555489 CCDC136Q96JN2 1154 aa13.3□□□□□ -0.28
RPGRIP1-208ENST00000555489 PANK3Q9H999 370 aa13.3□□□□□ -0.28
RPGRIP1-208ENST00000555489 BLMP54132 1417 aaPredicted RBP13.29□□□□□ -0.28
RPGRIP1-208ENST00000555489 CLTCL1P53675 1640 aa13.29□□□□□ -0.28
RPGRIP1-208ENST00000555489 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
RPGRIP1-208ENST00000555489 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
RPGRIP1-208ENST00000555489 KIAA1210Q9ULL0 1709 aa13.28□□□□□ -0.28
RPGRIP1-208ENST00000555489 SYNMO15061 1565 aa13.28□□□□□ -0.28
RPGRIP1-208ENST00000555489 ADGRL1O94910 1474 aa13.27□□□□□ -0.28
RPGRIP1-208ENST00000555489 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
RPGRIP1-208ENST00000555489 CC2D1BQ5T0F9 858 aaKnown RBP13.26□□□□□ -0.29
RPGRIP1-208ENST00000555489 RCAN3Q9UKA8 241 aa13.25□□□□□ -0.29
RPGRIP1-208ENST00000555489 MYOM2P54296 1465 aa13.25□□□□□ -0.29
RPGRIP1-208ENST00000555489 KNSTRNQ9Y448 316 aa13.24□□□□□ -0.29
RPGRIP1-208ENST00000555489 MSH5O43196 834 aa13.24□□□□□ -0.29
RPGRIP1-208ENST00000555489 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
RPGRIP1-208ENST00000555489 MROH1Q8NDA8 1641 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms