RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 KDM4FA0A1W2PPD8 638 aa7.68□□□□□ -1.18
CPSF2-204ENST00000555244 SMYD5Q6GMV2 418 aa7.68□□□□□ -1.18
CPSF2-204ENST00000555244 POTEEQ6S8J3 1075 aa7.68□□□□□ -1.18
CPSF2-204ENST00000555244 CUX2O14529 1486 aa7.68□□□□□ -1.18
CPSF2-204ENST00000555244 WIZO95785 1651 aa7.67□□□□□ -1.18
CPSF2-204ENST00000555244 CADPSQ9ULU8 1353 aa7.67□□□□□ -1.18
CPSF2-204ENST00000555244 NESP48681 1621 aa7.67□□□□□ -1.18
CPSF2-204ENST00000555244 LSM11P83369 360 aaKnown RBP eCLIP7.66□□□□□ -1.18
CPSF2-204ENST00000555244 PSDA5PKW4 1024 aaPredicted RBP7.65□□□□□ -1.18
CPSF2-204ENST00000555244 SEMA3EO15041 775 aa7.65□□□□□ -1.18
CPSF2-204ENST00000555244 MAP3K9P80192 1104 aa7.65□□□□□ -1.18
CPSF2-204ENST00000555244 PPP4R3BQ5MIZ7 849 aa7.65□□□□□ -1.18
CPSF2-204ENST00000555244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
CPSF2-204ENST00000555244 ERCC6Q03468 1493 aa7.64□□□□□ -1.19
CPSF2-204ENST00000555244 PDS5BQ9NTI5 1447 aa7.64□□□□□ -1.19
CPSF2-204ENST00000555244 TESPA1A2RU30 521 aaPredicted RBP7.64□□□□□ -1.19
CPSF2-204ENST00000555244 SPDYE16A6NNV3 312 aaPredicted RBP7.64□□□□□ -1.19
CPSF2-204ENST00000555244 PSEN2P49810 448 aa7.64□□□□□ -1.19
CPSF2-204ENST00000555244 LMOD2Q6P5Q4 547 aa7.64□□□□□ -1.19
CPSF2-204ENST00000555244 ZNF454Q8N9F8 522 aa7.64□□□□□ -1.19
CPSF2-204ENST00000555244 MYT1LQ9UL68 1186 aa7.64□□□□□ -1.19
CPSF2-204ENST00000555244 TOP2AP11388 1531 aaKnown RBP7.63□□□□□ -1.19
CPSF2-204ENST00000555244 EVI5O60447 810 aa7.63□□□□□ -1.19
CPSF2-204ENST00000555244 PBX2P40425 430 aa7.63□□□□□ -1.19
CPSF2-204ENST00000555244 RNF166Q96A37 237 aaPredicted RBP7.63□□□□□ -1.19
CPSF2-204ENST00000555244 EMILIN3Q9NT22 766 aa7.63□□□□□ -1.19
CPSF2-204ENST00000555244 DPYSL4O14531 572 aa7.62□□□□□ -1.19
CPSF2-204ENST00000555244 ARHGAP33O14559 1287 aa7.62□□□□□ -1.19
CPSF2-204ENST00000555244 CFTRP13569 1480 aa7.62□□□□□ -1.19
CPSF2-204ENST00000555244 DMRTA1Q5VZB9 504 aa7.61□□□□□ -1.19
CPSF2-204ENST00000555244 PDIA6Q15084 440 aa7.6□□□□□ -1.19
CPSF2-204ENST00000555244 KCNK17Q96T54 332 aa7.6□□□□□ -1.19
CPSF2-204ENST00000555244 THOC2Q8NI27 1593 aaKnown RBP7.59□□□□□ -1.2
CPSF2-204ENST00000555244 KCNH8Q96L42 1107 aa7.58□□□□□ -1.2
CPSF2-204ENST00000555244 FOSBP53539 338 aa7.57□□□□□ -1.2
CPSF2-204ENST00000555244 ADGRD1Q6QNK2 874 aa7.57□□□□□ -1.2
CPSF2-204ENST00000555244 ANO8Q9HCE9 1232 aaPredicted RBP7.57□□□□□ -1.2
CPSF2-204ENST00000555244 PTGER2P43116 358 aa7.56□□□□□ -1.2
CPSF2-204ENST00000555244 JPH4Q96JJ6 628 aa7.55□□□□□ -1.2
CPSF2-204ENST00000555244 CCDC88BA6NC98 1476 aa7.55□□□□□ -1.2
CPSF2-204ENST00000555244 KIF21AQ7Z4S6 1674 aa7.54□□□□□ -1.2
CPSF2-204ENST00000555244 WDR62O43379 1518 aa7.54□□□□□ -1.2
CPSF2-204ENST00000555244 MLLT3P42568 568 aaPredicted RBP7.54□□□□□ -1.2
CPSF2-204ENST00000555244 ZDHHC16Q969W1 377 aa7.54□□□□□ -1.2
CPSF2-204ENST00000555244 BCL2L12Q9HB09 334 aa7.54□□□□□ -1.2
CPSF2-204ENST00000555244 FANCD2Q9BXW9 1451 aa7.54□□□□□ -1.2
CPSF2-204ENST00000555244 MRC2Q9UBG0 1479 aa7.54□□□□□ -1.2
CPSF2-204ENST00000555244 PTPREP23469 700 aa7.53□□□□□ -1.2
CPSF2-204ENST00000555244 STAC3Q96MF2 364 aa7.53□□□□□ -1.2
CPSF2-204ENST00000555244 ADAM33Q9BZ11 813 aa7.53□□□□□ -1.2
CPSF2-204ENST00000555244 CEP164Q9UPV0 1460 aa7.52□□□□□ -1.21
CPSF2-204ENST00000555244 ZC3H15Q8WU90 426 aaKnown RBP7.52□□□□□ -1.21
CPSF2-204ENST00000555244 PCDHGA10Q9Y5H3 936 aa7.52□□□□□ -1.21
CPSF2-204ENST00000555244 TK2O00142 265 aa7.51□□□□□ -1.21
CPSF2-204ENST00000555244 GPIHBP1Q8IV16 184 aa7.51□□□□□ -1.21
CPSF2-204ENST00000555244 GRXCR2A6NFK2 248 aa7.5□□□□□ -1.21
CPSF2-204ENST00000555244 HRO43593 1189 aa7.5□□□□□ -1.21
CPSF2-204ENST00000555244 DDX12PQ92771 950 aa7.5□□□□□ -1.21
CPSF2-204ENST00000555244 RBM26Q5T8P6 1007 aaKnown RBP7.49□□□□□ -1.21
CPSF2-204ENST00000555244 VPS9D1Q9Y2B5 631 aa7.49□□□□□ -1.21
CPSF2-204ENST00000555244 PHF14O94880 888 aa7.48□□□□□ -1.21
CPSF2-204ENST00000555244 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
CPSF2-204ENST00000555244 KCTD12Q96CX2 325 aaKnown RBP7.48□□□□□ -1.21
CPSF2-204ENST00000555244 RBM33Q96EV2 1170 aaKnown RBP7.48□□□□□ -1.21
CPSF2-204ENST00000555244 ZMYND10O75800 440 aa7.47□□□□□ -1.21
CPSF2-204ENST00000555244 URB2Q14146 1524 aaKnown RBP7.47□□□□□ -1.21
CPSF2-204ENST00000555244 PRDM2Q13029 1718 aa7.47□□□□□ -1.21
CPSF2-204ENST00000555244 ZBED2Q9BTP6 218 aa7.46□□□□□ -1.22
CPSF2-204ENST00000555244 ABCC8Q09428 1581 aa7.46□□□□□ -1.22
CPSF2-204ENST00000555244 COL9A1P20849 921 aa7.45□□□□□ -1.22
CPSF2-204ENST00000555244 FBXW7Q969H0 707 aa7.45□□□□□ -1.22
CPSF2-204ENST00000555244 PROX2Q3B8N5 592 aa7.44□□□□□ -1.22
CPSF2-204ENST00000555244 EPAS1Q99814 870 aa7.44□□□□□ -1.22
CPSF2-204ENST00000555244 NUTM2FA1L443 756 aa7.43□□□□□ -1.22
CPSF2-204ENST00000555244 GOLGA8CPA6NN73 597 aa7.43□□□□□ -1.22
CPSF2-204ENST00000555244 PPP1R3GB7ZBB8 358 aa7.43□□□□□ -1.22
CPSF2-204ENST00000555244 OSBPP22059 807 aa7.43□□□□□ -1.22
CPSF2-204ENST00000555244 C6orf132Q5T0Z8 1188 aa7.43□□□□□ -1.22
CPSF2-204ENST00000555244 BARGINQ6ZT62 677 aa7.43□□□□□ -1.22
CPSF2-204ENST00000555244 KRI1Q8N9T8 703 aaKnown RBP7.43□□□□□ -1.22
CPSF2-204ENST00000555244 SLC4A5Q9BY07 1137 aa7.43□□□□□ -1.22
CPSF2-204ENST00000555244 PTPN5P54829 565 aa7.42□□□□□ -1.22
CPSF2-204ENST00000555244 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
CPSF2-204ENST00000555244 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
CPSF2-204ENST00000555244 HCSTQ9UBK5 93 aa7.42□□□□□ -1.22
CPSF2-204ENST00000555244 TOPBP1Q92547 1522 aa7.42□□□□□ -1.22
CPSF2-204ENST00000555244 BHMG1C9JSJ3 638 aaPredicted RBP7.41□□□□□ -1.22
CPSF2-204ENST00000555244 MAP3K7O43318 606 aa7.41□□□□□ -1.22
CPSF2-204ENST00000555244 IFT140Q96RY7 1462 aa7.41□□□□□ -1.22
CPSF2-204ENST00000555244 FCHSD2O94868 740 aa7.4□□□□□ -1.22
CPSF2-204ENST00000555244 TSR1Q2NL82 804 aaKnown RBP7.4□□□□□ -1.22
CPSF2-204ENST00000555244 NBPF3Q9H094 633 aa7.4□□□□□ -1.22
CPSF2-204ENST00000555244 DNMBPQ6XZF7 1577 aa7.39□□□□□ -1.23
CPSF2-204ENST00000555244 WNT2BQ93097 391 aa7.39□□□□□ -1.23
CPSF2-204ENST00000555244 AK7Q96M32 723 aa7.39□□□□□ -1.23
CPSF2-204ENST00000555244 EN1Q05925 392 aaPredicted RBP7.38□□□□□ -1.23
CPSF2-204ENST00000555244 HIC1Q14526 733 aa7.38□□□□□ -1.23
CPSF2-204ENST00000555244 KIAA1468Q9P260 1216 aa7.38□□□□□ -1.23
CPSF2-204ENST00000555244 RABGEF1Q9UJ41 708 aa7.38□□□□□ -1.23
CPSF2-204ENST00000555244 GNPATO15228 680 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms