RNA–Protein interactions for RNA: ENST00000555029.5

PPP4R3A-207, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-207ENST00000555029 FAM135AQ9P2D6 1515 aa22.47■■□□□ 1.19
PPP4R3A-207ENST00000555029 KIF3BO15066 747 aa22.47■■□□□ 1.19
PPP4R3A-207ENST00000555029 RSPH4AQ5TD94 716 aa22.47■■□□□ 1.19
PPP4R3A-207ENST00000555029 KDM5DQ9BY66 1539 aa22.46■■□□□ 1.19
PPP4R3A-207ENST00000555029 UBAP1LF5GYI3 381 aa22.45■■□□□ 1.18
PPP4R3A-207ENST00000555029 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.18
PPP4R3A-207ENST00000555029 TNRQ92752 1358 aa22.44■■□□□ 1.18
PPP4R3A-207ENST00000555029 PZPP20742 1482 aa22.43■■□□□ 1.18
PPP4R3A-207ENST00000555029 ARHGEF5Q12774 1597 aa22.42■■□□□ 1.18
PPP4R3A-207ENST00000555029 WASHC2CQ9Y4E1 1318 aa22.41■■□□□ 1.18
PPP4R3A-207ENST00000555029 SOCS7O14512 581 aa22.41■■□□□ 1.18
PPP4R3A-207ENST00000555029 FBXO31Q5XUX0 539 aaPredicted RBP22.4■■□□□ 1.18
PPP4R3A-207ENST00000555029 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
PPP4R3A-207ENST00000555029 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
PPP4R3A-207ENST00000555029 NEURL4Q96JN8 1562 aa22.38■■□□□ 1.17
PPP4R3A-207ENST00000555029 NLRP1Q9C000 1473 aa22.35■■□□□ 1.17
PPP4R3A-207ENST00000555029 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
PPP4R3A-207ENST00000555029 CPS1P31327 1500 aa22.34■■□□□ 1.17
PPP4R3A-207ENST00000555029 ANKLE2Q86XL3 938 aa22.33■■□□□ 1.17
PPP4R3A-207ENST00000555029 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
PPP4R3A-207ENST00000555029 LRRC9Q6ZRR7 1453 aa22.33■■□□□ 1.16
PPP4R3A-207ENST00000555029 RNF17Q9BXT8 1623 aaKnown RBP22.32■■□□□ 1.16
PPP4R3A-207ENST00000555029 UGGT1Q9NYU2 1555 aa22.32■■□□□ 1.16
PPP4R3A-207ENST00000555029 MAST1Q9Y2H9 1570 aa22.32■■□□□ 1.16
PPP4R3A-207ENST00000555029 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
PPP4R3A-207ENST00000555029 ZC3H13Q5T200 1668 aaKnown RBP22.31■■□□□ 1.16
PPP4R3A-207ENST00000555029 SHANK2Q9UPX8 1470 aa22.31■■□□□ 1.16
PPP4R3A-207ENST00000555029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.31■■□□□ 1.16
PPP4R3A-207ENST00000555029 DEPDC5O75140 1603 aa22.29■■□□□ 1.16
PPP4R3A-207ENST00000555029 EIF2AK4Q9P2K8 1649 aaKnown RBP22.28■■□□□ 1.16
PPP4R3A-207ENST00000555029 ABCC3O15438 1527 aa22.27■■□□□ 1.16
PPP4R3A-207ENST00000555029 MED14O60244 1454 aa22.27■■□□□ 1.16
PPP4R3A-207ENST00000555029 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
PPP4R3A-207ENST00000555029 VWDEQ8N2E2 1590 aa22.26■■□□□ 1.15
PPP4R3A-207ENST00000555029 NPHP4O75161 1426 aaPredicted RBP22.26■■□□□ 1.15
PPP4R3A-207ENST00000555029 TOM1O60784 492 aa22.26■■□□□ 1.15
PPP4R3A-207ENST00000555029 IQGAP1P46940 1657 aa22.24■■□□□ 1.15
PPP4R3A-207ENST00000555029 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
PPP4R3A-207ENST00000555029 PIP4K2BP78356 416 aa22.23■■□□□ 1.15
PPP4R3A-207ENST00000555029 MYOM3Q5VTT5 1437 aa22.23■■□□□ 1.15
PPP4R3A-207ENST00000555029 MROH1Q8NDA8 1641 aa22.21■■□□□ 1.15
PPP4R3A-207ENST00000555029 CEP152O94986 1710 aa22.21■■□□□ 1.15
PPP4R3A-207ENST00000555029 CFAP65Q6ZU64 1925 aaKnown RBP22.21■■□□□ 1.15
PPP4R3A-207ENST00000555029 ERVK-7P63135 1459 aa22.21■■□□□ 1.15
PPP4R3A-207ENST00000555029 HSPA1LP34931 641 aa22.2■■□□□ 1.14
PPP4R3A-207ENST00000555029 KANK4Q5T7N3 995 aaPredicted RBP22.2■■□□□ 1.14
PPP4R3A-207ENST00000555029 DUOX2Q9NRD8 1548 aa22.19■■□□□ 1.14
PPP4R3A-207ENST00000555029 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
PPP4R3A-207ENST00000555029 UBR1Q8IWV7 1749 aa22.16■■□□□ 1.14
PPP4R3A-207ENST00000555029 MED1Q15648 1581 aaPredicted RBP22.15■■□□□ 1.14
PPP4R3A-207ENST00000555029 STRCP1A6NGW2 1772 aa22.14■■□□□ 1.13
PPP4R3A-207ENST00000555029 CROCC2H7BZ55 1655 aa22.14■■□□□ 1.13
PPP4R3A-207ENST00000555029 SYNMO15061 1565 aa22.13■■□□□ 1.13
PPP4R3A-207ENST00000555029 ALKQ9UM73 1620 aa22.12■■□□□ 1.13
PPP4R3A-207ENST00000555029 PRDM15P57071 1507 aaPredicted RBP22.11■■□□□ 1.13
PPP4R3A-207ENST00000555029 KIF15Q9NS87 1388 aa22.11■■□□□ 1.13
PPP4R3A-207ENST00000555029 LRRC7Q96NW7 1537 aa22.11■■□□□ 1.13
PPP4R3A-207ENST00000555029 ERBINQ96RT1 1412 aa22.1■■□□□ 1.13
PPP4R3A-207ENST00000555029 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
PPP4R3A-207ENST00000555029 ARHGAP31Q2M1Z3 1444 aa22.09■■□□□ 1.13
PPP4R3A-207ENST00000555029 PTPN23Q9H3S7 1636 aa22.09■■□□□ 1.13
PPP4R3A-207ENST00000555029 ABCC5O15440 1437 aa22.07■■□□□ 1.12
PPP4R3A-207ENST00000555029 SLIT1O75093 1534 aa22.06■■□□□ 1.12
PPP4R3A-207ENST00000555029 APLP2Q06481 763 aa22.06■■□□□ 1.12
PPP4R3A-207ENST00000555029 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
PPP4R3A-207ENST00000555029 ARHGAP23Q9P227 1491 aa22.06■■□□□ 1.12
PPP4R3A-207ENST00000555029 TXNDC2Q86VQ3 553 aa22.04■■□□□ 1.12
PPP4R3A-207ENST00000555029 PIK3C2BO00750 1634 aa22.03■■□□□ 1.12
PPP4R3A-207ENST00000555029 KANK1Q14678 1352 aa22.03■■□□□ 1.12
PPP4R3A-207ENST00000555029 LTKP29376 864 aa22.03■■□□□ 1.12
PPP4R3A-207ENST00000555029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.121e-8■□□□□ 10.3
PPP4R3A-207ENST00000555029 DAPK1P53355 1430 aa22.03■■□□□ 1.12
PPP4R3A-207ENST00000555029 EID1Q9Y6B2 187 aa22.02■■□□□ 1.12
PPP4R3A-207ENST00000555029 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
PPP4R3A-207ENST00000555029 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
PPP4R3A-207ENST00000555029 KDM5AP29375 1690 aaKnown RBP21.99■■□□□ 1.11
PPP4R3A-207ENST00000555029 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
PPP4R3A-207ENST00000555029 STAG3Q9UJ98 1225 aa21.98■■□□□ 1.11
PPP4R3A-207ENST00000555029 XIRP1Q702N8 1843 aaKnown RBP21.98■■□□□ 1.11
PPP4R3A-207ENST00000555029 ANKRD30AQ9BXX3 1397 aa21.98■■□□□ 1.11
PPP4R3A-207ENST00000555029 TMEM2Q9UHN6 1383 aa21.98■■□□□ 1.11
PPP4R3A-207ENST00000555029 LMTK2Q8IWU2 1503 aa21.96■■□□□ 1.11
PPP4R3A-207ENST00000555029 EFCAB6Q5THR3 1501 aa21.96■■□□□ 1.11
PPP4R3A-207ENST00000555029 CHIC2Q9UKJ5 165 aa21.94■■□□□ 1.1
PPP4R3A-207ENST00000555029 IDI1Q13907 227 aa21.91■■□□□ 1.1
PPP4R3A-207ENST00000555029 ADGRB3O60242 1522 aa21.88■■□□□ 1.09
PPP4R3A-207ENST00000555029 NOS1P29475 1434 aa21.88■■□□□ 1.09
PPP4R3A-207ENST00000555029 ADGRL2O95490 1459 aa21.87■■□□□ 1.09
PPP4R3A-207ENST00000555029 TET3O43151 1660 aa21.86■■□□□ 1.09
PPP4R3A-207ENST00000555029 TMEM94Q12767 1356 aa21.86■■□□□ 1.09
PPP4R3A-207ENST00000555029 KCNA6P17658 529 aa21.85■■□□□ 1.09
PPP4R3A-207ENST00000555029 FAM135BQ49AJ0 1406 aa21.85■■□□□ 1.09
PPP4R3A-207ENST00000555029 SLC26A8Q96RN1 970 aa21.84■■□□□ 1.09
PPP4R3A-207ENST00000555029 SLC52A1Q9NWF4 448 aa21.84■■□□□ 1.09
PPP4R3A-207ENST00000555029 PROSER2Q86WR7 435 aaPredicted RBP21.82■■□□□ 1.08
PPP4R3A-207ENST00000555029 RPRD2Q5VT52 1461 aaKnown RBP21.82■■□□□ 1.08
PPP4R3A-207ENST00000555029 FAM50AQ14320 339 aaKnown RBP21.81■■□□□ 1.08
PPP4R3A-207ENST00000555029 NKTRP30414 1462 aaKnown RBP21.81■■□□□ 1.08
PPP4R3A-207ENST00000555029 NWD1Q149M9 1564 aa21.81■■□□□ 1.08
PPP4R3A-207ENST00000555029 ANKRD50Q9ULJ7 1429 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms