RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
SIX1-203ENST00000554986 A2MP01023 1474 aa19.04■□□□□ 0.64
SIX1-203ENST00000554986 ROCK1Q13464 1354 aa19.04■□□□□ 0.64
SIX1-203ENST00000554986 REREQ9P2R6 1566 aa19.03■□□□□ 0.64
SIX1-203ENST00000554986 DHX29Q7Z478 1369 aaKnown RBP19.01■□□□□ 0.63
SIX1-203ENST00000554986 DUOX2Q9NRD8 1548 aa19■□□□□ 0.63
SIX1-203ENST00000554986 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
SIX1-203ENST00000554986 NAIPQ13075 1403 aa18.97■□□□□ 0.63
SIX1-203ENST00000554986 GCC2Q8IWJ2 1684 aa18.97■□□□□ 0.63
SIX1-203ENST00000554986 AGLP35573 1532 aa18.97■□□□□ 0.63
SIX1-203ENST00000554986 HFM1A2PYH4 1435 aa18.96■□□□□ 0.63
SIX1-203ENST00000554986 ERBINQ96RT1 1412 aa18.95■□□□□ 0.62
SIX1-203ENST00000554986 ANKRD50Q9ULJ7 1429 aa18.95■□□□□ 0.62
SIX1-203ENST00000554986 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
SIX1-203ENST00000554986 ARID4BQ4LE39 1312 aaPredicted RBP18.94■□□□□ 0.62
SIX1-203ENST00000554986 EIF2AK4Q9P2K8 1649 aaKnown RBP18.94■□□□□ 0.62
SIX1-203ENST00000554986 BCORL1Q5H9F3 1711 aa18.94■□□□□ 0.62
SIX1-203ENST00000554986 KIF3BO15066 747 aa18.92■□□□□ 0.62
SIX1-203ENST00000554986 MLECQ14165 292 aa18.9■□□□□ 0.62
SIX1-203ENST00000554986 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.62
SIX1-203ENST00000554986 RNF17Q9BXT8 1623 aaKnown RBP18.89■□□□□ 0.62
SIX1-203ENST00000554986 GGT6Q6P531 493 aa18.88■□□□□ 0.61
SIX1-203ENST00000554986 DEPDC5O75140 1603 aa18.87■□□□□ 0.61
SIX1-203ENST00000554986 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
SIX1-203ENST00000554986 ADAMTSL3P82987 1691 aa18.85■□□□□ 0.61
SIX1-203ENST00000554986 UNC13BO14795 1591 aa18.85■□□□□ 0.61
SIX1-203ENST00000554986 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
SIX1-203ENST00000554986 MADDQ8WXG6 1647 aa18.83■□□□□ 0.6
SIX1-203ENST00000554986 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.6
SIX1-203ENST00000554986 FER1L4A9Z1Z3 1794 aa18.82■□□□□ 0.6
SIX1-203ENST00000554986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
SIX1-203ENST00000554986 CEP152O94986 1710 aa18.8■□□□□ 0.6
SIX1-203ENST00000554986 VWDEQ8N2E2 1590 aa18.8■□□□□ 0.6
SIX1-203ENST00000554986 CLTCQ00610 1675 aaKnown RBP18.8■□□□□ 0.6
SIX1-203ENST00000554986 KDM4FA0A1W2PPD8 638 aa18.79■□□□□ 0.6
SIX1-203ENST00000554986 ABCC3O15438 1527 aa18.78■□□□□ 0.6
SIX1-203ENST00000554986 KDM5DQ9BY66 1539 aa18.78■□□□□ 0.6
SIX1-203ENST00000554986 RIMS1Q86UR5 1692 aaKnown RBP18.78■□□□□ 0.6
SIX1-203ENST00000554986 IQGAP3Q86VI3 1631 aa18.76■□□□□ 0.59
SIX1-203ENST00000554986 NUP155O75694 1391 aa18.76■□□□□ 0.59
SIX1-203ENST00000554986 WASHC2CQ9Y4E1 1318 aa18.76■□□□□ 0.59
SIX1-203ENST00000554986 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
SIX1-203ENST00000554986 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
SIX1-203ENST00000554986 KANK1Q14678 1352 aa18.75■□□□□ 0.59
SIX1-203ENST00000554986 FAM135AQ9P2D6 1515 aa18.75■□□□□ 0.59
SIX1-203ENST00000554986 TRIM52Q96A61 297 aa18.74■□□□□ 0.59
SIX1-203ENST00000554986 CAMSAP1Q5T5Y3 1602 aa18.73■□□□□ 0.59
SIX1-203ENST00000554986 LMTK2Q8IWU2 1503 aa18.73■□□□□ 0.59
SIX1-203ENST00000554986 MROH2AA6NES4 1674 aa18.73■□□□□ 0.59
SIX1-203ENST00000554986 PZPP20742 1482 aa18.72■□□□□ 0.59
SIX1-203ENST00000554986 ESF1Q9H501 851 aaKnown RBP18.72■□□□□ 0.59
SIX1-203ENST00000554986 CNTLNQ9NXG0 1405 aa18.72■□□□□ 0.59
SIX1-203ENST00000554986 RBM19Q9Y4C8 960 aaKnown RBP18.72■□□□□ 0.59
SIX1-203ENST00000554986 TET3O43151 1660 aa18.71■□□□□ 0.59
SIX1-203ENST00000554986 C3P01024 1663 aa18.71■□□□□ 0.59
SIX1-203ENST00000554986 ZMYM3Q14202 1370 aa18.69■□□□□ 0.58
SIX1-203ENST00000554986 PTPRMP28827 1452 aa18.69■□□□□ 0.58
SIX1-203ENST00000554986 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
SIX1-203ENST00000554986 CEBPAP49715 358 aaPredicted RBP18.68■□□□□ 0.58
SIX1-203ENST00000554986 E9PCH4 1651 aa18.67■□□□□ 0.58
SIX1-203ENST00000554986 CFAP65Q6ZU64 1925 aaKnown RBP18.67■□□□□ 0.58
SIX1-203ENST00000554986 FKBP8Q14318 412 aa18.67■□□□□ 0.58
SIX1-203ENST00000554986 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
SIX1-203ENST00000554986 NPATQ14207 1427 aa18.66■□□□□ 0.58
SIX1-203ENST00000554986 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
SIX1-203ENST00000554986 ARHGAP31Q2M1Z3 1444 aa18.65■□□□□ 0.58
SIX1-203ENST00000554986 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.58
SIX1-203ENST00000554986 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
SIX1-203ENST00000554986 NEFLP07196 543 aa18.62■□□□□ 0.57
SIX1-203ENST00000554986 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
SIX1-203ENST00000554986 PKD2Q13563 968 aa18.62■□□□□ 0.57
SIX1-203ENST00000554986 FOXD1Q16676 465 aa18.61■□□□□ 0.57
SIX1-203ENST00000554986 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
SIX1-203ENST00000554986 ERVK-7P63135 1459 aa18.59■□□□□ 0.57
SIX1-203ENST00000554986 FANCIQ9NVI1 1328 aa18.59■□□□□ 0.57
SIX1-203ENST00000554986 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
SIX1-203ENST00000554986 SPATA31D1Q6ZQQ2 1576 aa18.59■□□□□ 0.57
SIX1-203ENST00000554986 BCANQ96GW7 911 aa18.57■□□□□ 0.56
SIX1-203ENST00000554986 SYNMO15061 1565 aa18.57■□□□□ 0.56
SIX1-203ENST00000554986 NOS1P29475 1434 aa18.56■□□□□ 0.56
SIX1-203ENST00000554986 SPHKAPQ2M3C7 1700 aa18.56■□□□□ 0.56
SIX1-203ENST00000554986 PLA2R1Q13018 1463 aa18.55■□□□□ 0.56
SIX1-203ENST00000554986 PTPRTO14522 1441 aa18.54■□□□□ 0.56
SIX1-203ENST00000554986 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
SIX1-203ENST00000554986 TNRQ92752 1358 aa18.53■□□□□ 0.56
SIX1-203ENST00000554986 UGGT1Q9NYU2 1555 aa18.53■□□□□ 0.56
SIX1-203ENST00000554986 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.56
SIX1-203ENST00000554986 SETD1BQ9UPS6 1966 aaKnown RBP18.52■□□□□ 0.56
SIX1-203ENST00000554986 MYO3AQ8NEV4 1616 aa18.51■□□□□ 0.55
SIX1-203ENST00000554986 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
SIX1-203ENST00000554986 TRPM2O94759 1503 aa18.51■□□□□ 0.55
SIX1-203ENST00000554986 MSH5O43196 834 aa18.5■□□□□ 0.55
SIX1-203ENST00000554986 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
SIX1-203ENST00000554986 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
SIX1-203ENST00000554986 ANKRD30BQ9BXX2 1392 aa18.48■□□□□ 0.55
SIX1-203ENST00000554986 IDI1Q13907 227 aa18.47■□□□□ 0.55
SIX1-203ENST00000554986 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
SIX1-203ENST00000554986 ZNF142P52746 1687 aaPredicted RBP18.45■□□□□ 0.54
SIX1-203ENST00000554986 CEP170BQ9Y4F5 1589 aaPredicted RBP18.45■□□□□ 0.54
SIX1-203ENST00000554986 UHRF1BP1Q6BDS2 1440 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms