RNA–Protein interactions for RNA: ENST00000554981.1

TMEM260-205, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-205ENST00000554981 ZMYM4Q5VZL5 1548 aa9.05□□□□□ -0.96
TMEM260-205ENST00000554981 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
TMEM260-205ENST00000554981 CDK13Q14004 1512 aaKnown RBP9.05□□□□□ -0.96
TMEM260-205ENST00000554981 PIP4K2BP78356 416 aa9.04□□□□□ -0.96
TMEM260-205ENST00000554981 SP7Q8TDD2 431 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-205ENST00000554981 ARHGAP35Q9NRY4 1499 aa9.03□□□□□ -0.96
TMEM260-205ENST00000554981 SLC24A1O60721 1099 aa9.03□□□□□ -0.96
TMEM260-205ENST00000554981 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-205ENST00000554981 TAOK2Q9UL54 1235 aa9.02□□□□□ -0.97
TMEM260-205ENST00000554981 ATP1B4Q9UN42 357 aaPredicted RBP9.02□□□□□ -0.97
TMEM260-205ENST00000554981 NCOA1Q15788 1441 aa9.02□□□□□ -0.97
TMEM260-205ENST00000554981 C3P01024 1663 aa9.01□□□□□ -0.97
TMEM260-205ENST00000554981 PYGBP11216 843 aa9.01□□□□□ -0.97
TMEM260-205ENST00000554981 NCKAP5LQ9HCH0 1330 aa9.01□□□□□ -0.97
TMEM260-205ENST00000554981 CFAP74Q9C0B2 1584 aa9□□□□□ -0.97
TMEM260-205ENST00000554981 HAX1O00165 279 aa9□□□□□ -0.97
TMEM260-205ENST00000554981 ATP10AO60312 1499 aa9□□□□□ -0.97
TMEM260-205ENST00000554981 MAGI2Q86UL8 1455 aa9□□□□□ -0.97
TMEM260-205ENST00000554981 LRRIQ1Q96JM4 1722 aa9□□□□□ -0.97
TMEM260-205ENST00000554981 SETD1BQ9UPS6 1966 aaKnown RBP8.99□□□□□ -0.97
TMEM260-205ENST00000554981 C9orf84Q5VXU9 1444 aa8.99□□□□□ -0.97
TMEM260-205ENST00000554981 CAMSAP1Q5T5Y3 1602 aa8.99□□□□□ -0.97
TMEM260-205ENST00000554981 CHRM1P11229 460 aaPredicted RBP8.99□□□□□ -0.97
TMEM260-205ENST00000554981 RIOK3O14730 519 aaKnown RBP8.98□□□□□ -0.97
TMEM260-205ENST00000554981 CHGAP10645 457 aaKnown RBP8.98□□□□□ -0.97
TMEM260-205ENST00000554981 EVX2Q03828 476 aa8.98□□□□□ -0.97
TMEM260-205ENST00000554981 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.98□□□□□ -0.97
TMEM260-205ENST00000554981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.98□□□□□ -0.97
TMEM260-205ENST00000554981 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
TMEM260-205ENST00000554981 SCAPERQ9BY12 1400 aa8.97□□□□□ -0.97
TMEM260-205ENST00000554981 PLEKHD1A6NEE1 506 aa8.97□□□□□ -0.97
TMEM260-205ENST00000554981 C19orf67A6NJJ6 358 aa8.97□□□□□ -0.97
TMEM260-205ENST00000554981 KIF14Q15058 1648 aa8.96□□□□□ -0.98
TMEM260-205ENST00000554981 BBXQ8WY36 941 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-205ENST00000554981 RGS17Q9UGC6 210 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-205ENST00000554981 TRAPPC8Q9Y2L5 1435 aa8.95□□□□□ -0.98
TMEM260-205ENST00000554981 RNF25Q96BH1 459 aaPredicted RBP8.93□□□□□ -0.98
TMEM260-205ENST00000554981 CLIP1P30622 1438 aa8.93□□□□□ -0.98
TMEM260-205ENST00000554981 MYO5CQ9NQX4 1742 aa8.93□□□□□ -0.98
TMEM260-205ENST00000554981 VGFO15240 615 aaPredicted RBP8.92□□□□□ -0.98
TMEM260-205ENST00000554981 TOM1O60784 492 aa8.92□□□□□ -0.98
TMEM260-205ENST00000554981 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
TMEM260-205ENST00000554981 MYT1LQ9UL68 1186 aa8.92□□□□□ -0.98
TMEM260-205ENST00000554981 TROQ12816 1431 aaPredicted RBP8.91□□□□□ -0.98
TMEM260-205ENST00000554981 CD44P16070 742 aaKnown RBP8.91□□□□□ -0.98
TMEM260-205ENST00000554981 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
TMEM260-205ENST00000554981 ZRANB1Q9UGI0 708 aa8.91□□□□□ -0.98
TMEM260-205ENST00000554981 DIP2CQ9Y2E4 1556 aa8.9□□□□□ -0.98
TMEM260-205ENST00000554981 CASKIN1Q8WXD9 1431 aa8.9□□□□□ -0.98
TMEM260-205ENST00000554981 AFAP1Q8N556 730 aa8.9□□□□□ -0.98
TMEM260-205ENST00000554981 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
TMEM260-205ENST00000554981 SRCAPQ6ZRS2 3230 aa8.9□□□□□ -0.98
TMEM260-205ENST00000554981 ALKQ9UM73 1620 aa8.9□□□□□ -0.99
TMEM260-205ENST00000554981 FYCO1Q9BQS8 1478 aa8.89□□□□□ -0.99
TMEM260-205ENST00000554981 SETD1AO15047 1707 aaKnown RBP8.89□□□□□ -0.99
TMEM260-205ENST00000554981 SUPT6HQ7KZ85 1726 aaKnown RBP8.89□□□□□ -0.99
TMEM260-205ENST00000554981 STK25O00506 426 aa8.89□□□□□ -0.99
TMEM260-205ENST00000554981 ZNF467Q7Z7K2 595 aaPredicted RBP8.89□□□□□ -0.99
TMEM260-205ENST00000554981 ARHGAP5Q13017 1502 aa8.89□□□□□ -0.99
TMEM260-205ENST00000554981 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
TMEM260-205ENST00000554981 PLCH2O75038 1416 aa8.88□□□□□ -0.99
TMEM260-205ENST00000554981 ABCA6Q8N139 1617 aa8.88□□□□□ -0.99
TMEM260-205ENST00000554981 POTEAQ6S8J7 498 aa8.88□□□□□ -0.99
TMEM260-205ENST00000554981 HS6ST3Q8IZP7 471 aa8.88□□□□□ -0.99
TMEM260-205ENST00000554981 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
TMEM260-205ENST00000554981 TCOF1Q13428 1488 aaKnown RBP8.88□□□□□ -0.99
TMEM260-205ENST00000554981 PAXIP1Q6ZW49 1069 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-205ENST00000554981 CDK11AQ9UQ88 783 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-205ENST00000554981 CDC42BPBQ9Y5S2 1711 aa8.87□□□□□ -0.99
TMEM260-205ENST00000554981 CEP162Q5TB80 1403 aa8.87□□□□□ -0.99
TMEM260-205ENST00000554981 PREX2Q70Z35 1606 aa8.87□□□□□ -0.99
TMEM260-205ENST00000554981 ZNF518AQ6AHZ1 1483 aa8.86□□□□□ -0.99
TMEM260-205ENST00000554981 HAP1P54257 671 aaPredicted RBP8.86□□□□□ -0.99
TMEM260-205ENST00000554981 MYO3AQ8NEV4 1616 aa8.86□□□□□ -0.99
TMEM260-205ENST00000554981 KDM5CP41229 1560 aa8.86□□□□□ -0.99
TMEM260-205ENST00000554981 CDC42BPAQ5VT25 1732 aa8.85□□□□□ -0.99
TMEM260-205ENST00000554981 PLA2R1Q13018 1463 aa8.85□□□□□ -0.99
TMEM260-205ENST00000554981 SPRYD3Q8NCJ5 442 aa8.85□□□□□ -0.99
TMEM260-205ENST00000554981 PCDHB13Q9Y5F0 798 aa8.85□□□□□ -0.99
TMEM260-205ENST00000554981 STK24Q9Y6E0 443 aa8.85□□□□□ -0.99
TMEM260-205ENST00000554981 REREQ9P2R6 1566 aa8.85□□□□□ -0.99
TMEM260-205ENST00000554981 CEP170BQ9Y4F5 1589 aaPredicted RBP8.85□□□□□ -0.99
TMEM260-205ENST00000554981 AGLP35573 1532 aa8.85□□□□□ -0.99
TMEM260-205ENST00000554981 ZNF142P52746 1687 aaPredicted RBP8.85□□□□□ -0.99
TMEM260-205ENST00000554981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.84□□□□□ -0.99
TMEM260-205ENST00000554981 LOC105371045A0A1W2PR82 267 aa8.84□□□□□ -0.99
TMEM260-205ENST00000554981 NPATQ14207 1427 aa8.84□□□□□ -0.99
TMEM260-205ENST00000554981 EFCAB2Q5VUJ9 269 aa8.84□□□□□ -0.99
TMEM260-205ENST00000554981 ZFP91Q96JP5 570 aaPredicted RBP8.84□□□□□ -0.99
TMEM260-205ENST00000554981 PCDHB8Q9UN66 801 aa8.84□□□□□ -0.99
TMEM260-205ENST00000554981 ITSN2Q9NZM3 1697 aa8.84□□□□□ -0.99
TMEM260-205ENST00000554981 CPS1P31327 1500 aa8.84□□□□□ -0.99
TMEM260-205ENST00000554981 ZMYM3Q14202 1370 aa8.84□□□□□ -0.99
TMEM260-205ENST00000554981 SHANK2Q9UPX8 1470 aa8.83□□□□□ -1
TMEM260-205ENST00000554981 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
TMEM260-205ENST00000554981 ZNF579Q8NAF0 562 aaKnown RBP8.83□□□□□ -1
TMEM260-205ENST00000554981 PTPRKQ15262 1439 aa8.82□□□□□ -1
TMEM260-205ENST00000554981 ABCC1P33527 1531 aa8.82□□□□□ -1
TMEM260-205ENST00000554981 MAP3K13O43283 966 aa8.82□□□□□ -1
TMEM260-205ENST00000554981 KIF12Q96FN5 646 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms