RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 PLEKHD1A6NEE1 506 aa17.73■□□□□ 0.43
PPP4R3A-206ENST00000554943 ARID3CA6NKF2 412 aa17.73■□□□□ 0.43
PPP4R3A-206ENST00000554943 TRIM52Q96A61 297 aa17.73■□□□□ 0.43
PPP4R3A-206ENST00000554943 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
PPP4R3A-206ENST00000554943 IFT172Q9UG01 1749 aa17.72■□□□□ 0.43
PPP4R3A-206ENST00000554943 MROH1Q8NDA8 1641 aa17.71■□□□□ 0.43
PPP4R3A-206ENST00000554943 KIAA1210Q9ULL0 1709 aa17.71■□□□□ 0.42
PPP4R3A-206ENST00000554943 ARHGAP5Q13017 1502 aa17.7■□□□□ 0.42
PPP4R3A-206ENST00000554943 PRAG1Q86YV5 1406 aa17.7■□□□□ 0.42
PPP4R3A-206ENST00000554943 MADDQ8WXG6 1647 aa17.7■□□□□ 0.42
PPP4R3A-206ENST00000554943 WDR7Q9Y4E6 1490 aa17.68■□□□□ 0.42
PPP4R3A-206ENST00000554943 RTEL1-TNFRSF6BF6WH68 1400 aa17.68■□□□□ 0.42
PPP4R3A-206ENST00000554943 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
PPP4R3A-206ENST00000554943 TET3O43151 1660 aa17.68■□□□□ 0.42
PPP4R3A-206ENST00000554943 A2MP01023 1474 aa17.68■□□□□ 0.42
PPP4R3A-206ENST00000554943 USP47Q96K76 1375 aa17.67■□□□□ 0.42
PPP4R3A-206ENST00000554943 TRPM2O94759 1503 aa17.67■□□□□ 0.42
PPP4R3A-206ENST00000554943 PKD2Q13563 968 aa17.65■□□□□ 0.42
PPP4R3A-206ENST00000554943 NUP155O75694 1391 aa17.64■□□□□ 0.41
PPP4R3A-206ENST00000554943 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
PPP4R3A-206ENST00000554943 PTPRTO14522 1441 aa17.63■□□□□ 0.41
PPP4R3A-206ENST00000554943 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
PPP4R3A-206ENST00000554943 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-206ENST00000554943 MYOM1P52179 1685 aa17.6■□□□□ 0.41
PPP4R3A-206ENST00000554943 CLTCL1P53675 1640 aa17.59■□□□□ 0.41
PPP4R3A-206ENST00000554943 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-206ENST00000554943 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.41
PPP4R3A-206ENST00000554943 TSHZ2Q9NRE2 1034 aa17.58■□□□□ 0.41
PPP4R3A-206ENST00000554943 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.4
PPP4R3A-206ENST00000554943 FBLN2P98095 1184 aa17.58■□□□□ 0.4
PPP4R3A-206ENST00000554943 KTN1Q86UP2 1357 aaKnown RBP17.57■□□□□ 0.4
PPP4R3A-206ENST00000554943 KIDINS220Q9ULH0 1771 aa17.57■□□□□ 0.4
PPP4R3A-206ENST00000554943 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
PPP4R3A-206ENST00000554943 LMTK2Q8IWU2 1503 aa17.56■□□□□ 0.4
PPP4R3A-206ENST00000554943 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
PPP4R3A-206ENST00000554943 ZBED9Q6R2W3 1325 aa17.55■□□□□ 0.4
PPP4R3A-206ENST00000554943 INSRP06213 1382 aa17.55■□□□□ 0.4
PPP4R3A-206ENST00000554943 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
PPP4R3A-206ENST00000554943 ATP7AQ04656 1500 aa17.53■□□□□ 0.4
PPP4R3A-206ENST00000554943 ERICH6BQ5W0A0 696 aa17.52■□□□□ 0.39
PPP4R3A-206ENST00000554943 ZC3H13Q5T200 1668 aaKnown RBP17.52■□□□□ 0.39
PPP4R3A-206ENST00000554943 TSPY4P0CV99 314 aa17.51■□□□□ 0.39
PPP4R3A-206ENST00000554943 TSPY10P0CW01 314 aa17.51■□□□□ 0.39
PPP4R3A-206ENST00000554943 NRXN1Q9ULB1 1477 aa17.51■□□□□ 0.39
PPP4R3A-206ENST00000554943 ZNF777Q9ULD5 760 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-206ENST00000554943 SMG6Q86US8 1419 aaKnown RBP17.51■□□□□ 0.39
PPP4R3A-206ENST00000554943 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
PPP4R3A-206ENST00000554943 MROH2AA6NES4 1674 aa17.5■□□□□ 0.39
PPP4R3A-206ENST00000554943 CCDC144AA2RUR9 1427 aa17.49■□□□□ 0.39
PPP4R3A-206ENST00000554943 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
PPP4R3A-206ENST00000554943 CFAP74Q9C0B2 1584 aa17.48■□□□□ 0.39
PPP4R3A-206ENST00000554943 BCANQ96GW7 911 aa17.48■□□□□ 0.39
PPP4R3A-206ENST00000554943 PPRC1Q5VV67 1664 aaKnown RBP17.48■□□□□ 0.39
PPP4R3A-206ENST00000554943 SYNMO15061 1565 aa17.47■□□□□ 0.39
PPP4R3A-206ENST00000554943 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
PPP4R3A-206ENST00000554943 FRMPD1Q5SYB0 1578 aa17.47■□□□□ 0.39
PPP4R3A-206ENST00000554943 MAP3K4Q9Y6R4 1608 aa17.45■□□□□ 0.38
PPP4R3A-206ENST00000554943 MYOM2P54296 1465 aa17.45■□□□□ 0.38
PPP4R3A-206ENST00000554943 FKBP8Q14318 412 aa17.44■□□□□ 0.38
PPP4R3A-206ENST00000554943 KIF1BO60333 1816 aa17.44■□□□□ 0.38
PPP4R3A-206ENST00000554943 ABCA6Q8N139 1617 aa17.43■□□□□ 0.38
PPP4R3A-206ENST00000554943 TESK2Q96S53 571 aa17.43■□□□□ 0.38
PPP4R3A-206ENST00000554943 PPLO60437 1756 aa17.43■□□□□ 0.38
PPP4R3A-206ENST00000554943 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
PPP4R3A-206ENST00000554943 PIK3C2BO00750 1634 aa17.42■□□□□ 0.38
PPP4R3A-206ENST00000554943 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
PPP4R3A-206ENST00000554943 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
PPP4R3A-206ENST00000554943 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-206ENST00000554943 ADGRB3O60242 1522 aa17.4■□□□□ 0.38
PPP4R3A-206ENST00000554943 ZNF518AQ6AHZ1 1483 aa17.4■□□□□ 0.38
PPP4R3A-206ENST00000554943 FANCAO15360 1455 aa17.39■□□□□ 0.37
PPP4R3A-206ENST00000554943 BLMP54132 1417 aaPredicted RBP17.39■□□□□ 0.37
PPP4R3A-206ENST00000554943 HECW2Q9P2P5 1572 aa17.38■□□□□ 0.37
PPP4R3A-206ENST00000554943 HNRNPUQ00839 825 aaKnown RBP eCLIP17.38■□□□□ 0.37
PPP4R3A-206ENST00000554943 WASHC2CQ9Y4E1 1318 aa17.38■□□□□ 0.37
PPP4R3A-206ENST00000554943 SIGLEC1Q9BZZ2 1709 aa17.37■□□□□ 0.37
PPP4R3A-206ENST00000554943 DISP3Q9P2K9 1392 aa17.36■□□□□ 0.37
PPP4R3A-206ENST00000554943 ST20-MTHFSA0A0A6YYL1 179 aa17.35■□□□□ 0.37
PPP4R3A-206ENST00000554943 KDM5AP29375 1690 aaKnown RBP17.35■□□□□ 0.37
PPP4R3A-206ENST00000554943 EFCAB2Q5VUJ9 269 aa17.34■□□□□ 0.37
PPP4R3A-206ENST00000554943 CARD11Q9BXL7 1154 aa17.34■□□□□ 0.37
PPP4R3A-206ENST00000554943 RICTORQ6R327 1708 aa17.34■□□□□ 0.37
PPP4R3A-206ENST00000554943 USP32Q8NFA0 1604 aa17.33■□□□□ 0.36
PPP4R3A-206ENST00000554943 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
PPP4R3A-206ENST00000554943 MLH3Q9UHC1 1453 aa17.33■□□□□ 0.36
PPP4R3A-206ENST00000554943 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
PPP4R3A-206ENST00000554943 ASXL2Q76L83 1435 aa17.32■□□□□ 0.36
PPP4R3A-206ENST00000554943 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
PPP4R3A-206ENST00000554943 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
PPP4R3A-206ENST00000554943 RALBP1Q15311 655 aa17.31■□□□□ 0.36
PPP4R3A-206ENST00000554943 ADGRL1O94910 1474 aa17.3■□□□□ 0.36
PPP4R3A-206ENST00000554943 SCAF11Q99590 1463 aaKnown RBP17.3■□□□□ 0.36
PPP4R3A-206ENST00000554943 CAMSAP1Q5T5Y3 1602 aa17.3■□□□□ 0.36
PPP4R3A-206ENST00000554943 NBPF1Q3BBV0 1214 aa17.29■□□□□ 0.36
PPP4R3A-206ENST00000554943 ADGRB1O14514 1584 aa17.29■□□□□ 0.36
PPP4R3A-206ENST00000554943 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
PPP4R3A-206ENST00000554943 POGZQ7Z3K3 1410 aa17.27■□□□□ 0.36
PPP4R3A-206ENST00000554943 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.35
PPP4R3A-206ENST00000554943 UGGT1Q9NYU2 1555 aa17.26■□□□□ 0.35
PPP4R3A-206ENST00000554943 GLI2P10070 1586 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms