RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 NEFMP07197 916 aa15.66■□□□□ 0.1
XRCC3-208ENST00000554811 KIAA0586Q9BVV6 1533 aa15.65■□□□□ 0.1
XRCC3-208ENST00000554811 CCDC144AA2RUR9 1427 aa15.65■□□□□ 0.1
XRCC3-208ENST00000554811 DHX29Q7Z478 1369 aaKnown RBP15.65■□□□□ 0.1
XRCC3-208ENST00000554811 TMF1P82094 1093 aa15.65■□□□□ 0.1
XRCC3-208ENST00000554811 PZPP20742 1482 aa15.64■□□□□ 0.09
XRCC3-208ENST00000554811 GPATCH8Q9UKJ3 1502 aaKnown RBP15.63■□□□□ 0.09
XRCC3-208ENST00000554811 SMG6Q86US8 1419 aaKnown RBP15.63■□□□□ 0.09
XRCC3-208ENST00000554811 PDE4AP27815 886 aa15.62■□□□□ 0.09
XRCC3-208ENST00000554811 GRIN2AQ12879 1464 aa15.62■□□□□ 0.09
XRCC3-208ENST00000554811 ARXQ96QS3 562 aa15.61■□□□□ 0.09
XRCC3-208ENST00000554811 DISP1Q96F81 1524 aa15.61■□□□□ 0.09
XRCC3-208ENST00000554811 ADAMTS8Q9UP79 889 aa15.61■□□□□ 0.09
XRCC3-208ENST00000554811 C20orf194Q5TEA3 1177 aa15.6■□□□□ 0.09
XRCC3-208ENST00000554811 PTPRGP23470 1445 aa15.6■□□□□ 0.09
XRCC3-208ENST00000554811 ADAMTS12P58397 1594 aa15.6■□□□□ 0.09
XRCC3-208ENST00000554811 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
XRCC3-208ENST00000554811 GCC2Q8IWJ2 1684 aa15.59■□□□□ 0.09
XRCC3-208ENST00000554811 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
XRCC3-208ENST00000554811 FRAT1Q92837 279 aaPredicted RBP15.58■□□□□ 0.09
XRCC3-208ENST00000554811 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.08
XRCC3-208ENST00000554811 PBRM1Q86U86 1689 aa15.58■□□□□ 0.08
XRCC3-208ENST00000554811 KIF14Q15058 1648 aa15.58■□□□□ 0.08
XRCC3-208ENST00000554811 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
XRCC3-208ENST00000554811 RAPGEF6Q8TEU7 1601 aa15.57■□□□□ 0.08
XRCC3-208ENST00000554811 SAFB2Q14151 953 aaKnown RBP eCLIP15.57■□□□□ 0.08
XRCC3-208ENST00000554811 KIAA0556O60303 1618 aa15.56■□□□□ 0.08
XRCC3-208ENST00000554811 RRP7AQ9Y3A4 280 aaKnown RBP15.55■□□□□ 0.08
XRCC3-208ENST00000554811 AFAP1Q8N556 730 aa15.55■□□□□ 0.08
XRCC3-208ENST00000554811 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
XRCC3-208ENST00000554811 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
XRCC3-208ENST00000554811 DISP3Q9P2K9 1392 aa15.53■□□□□ 0.08
XRCC3-208ENST00000554811 TCERG1O14776 1098 aaKnown RBP15.53■□□□□ 0.08
XRCC3-208ENST00000554811 APAF1O14727 1248 aa15.52■□□□□ 0.08
XRCC3-208ENST00000554811 KIF3BO15066 747 aa15.52■□□□□ 0.07
XRCC3-208ENST00000554811 BCL2L13Q9BXK5 485 aa15.52■□□□□ 0.07
XRCC3-208ENST00000554811 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
XRCC3-208ENST00000554811 BCORL1Q5H9F3 1711 aa15.5■□□□□ 0.07
XRCC3-208ENST00000554811 ATP10BO94823 1461 aa15.48■□□□□ 0.07
XRCC3-208ENST00000554811 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
XRCC3-208ENST00000554811 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.48■□□□□ 0.07
XRCC3-208ENST00000554811 CLUAP1Q96AJ1 413 aa15.48■□□□□ 0.07
XRCC3-208ENST00000554811 GOLGA2Q08379 1002 aa15.48■□□□□ 0.07
XRCC3-208ENST00000554811 ARHGAP5Q13017 1502 aa15.47■□□□□ 0.07
XRCC3-208ENST00000554811 EFCAB2Q5VUJ9 269 aa15.46■□□□□ 0.07
XRCC3-208ENST00000554811 TRAK1Q9UPV9 953 aa15.46■□□□□ 0.07
XRCC3-208ENST00000554811 SPAG9O60271 1321 aaKnown RBP15.46■□□□□ 0.07
XRCC3-208ENST00000554811 PDE3BQ13370 1112 aa15.46■□□□□ 0.07
XRCC3-208ENST00000554811 GGT6Q6P531 493 aa15.46■□□□□ 0.07
XRCC3-208ENST00000554811 PPP2R1AP30153 589 aa15.46■□□□□ 0.06
XRCC3-208ENST00000554811 CFAP70Q5T0N1 1121 aa15.46■□□□□ 0.06
XRCC3-208ENST00000554811 SPRYD3Q8NCJ5 442 aa15.46■□□□□ 0.06
XRCC3-208ENST00000554811 BCAR3O75815 825 aa15.45■□□□□ 0.06
XRCC3-208ENST00000554811 PLEKHH2Q8IVE3 1493 aa15.44■□□□□ 0.06
XRCC3-208ENST00000554811 IL27Q8NEV9 243 aa15.44■□□□□ 0.06
XRCC3-208ENST00000554811 BACH2Q9BYV9 841 aa15.44■□□□□ 0.06
XRCC3-208ENST00000554811 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
XRCC3-208ENST00000554811 SYNJ2O15056 1496 aa15.44■□□□□ 0.06
XRCC3-208ENST00000554811 RALGAPBQ86X10 1494 aa15.43■□□□□ 0.06
XRCC3-208ENST00000554811 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
XRCC3-208ENST00000554811 COG6Q9Y2V7 657 aa15.42■□□□□ 0.06
XRCC3-208ENST00000554811 TESK2Q96S53 571 aa15.42■□□□□ 0.06
XRCC3-208ENST00000554811 ERBINQ96RT1 1412 aa15.42■□□□□ 0.06
XRCC3-208ENST00000554811 SLKQ9H2G2 1235 aaPredicted RBP15.41■□□□□ 0.06
XRCC3-208ENST00000554811 TMEM132EQ6IEE7 984 aa15.4■□□□□ 0.06
XRCC3-208ENST00000554811 STK26Q9P289 416 aa15.4■□□□□ 0.06
XRCC3-208ENST00000554811 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
XRCC3-208ENST00000554811 PANK1Q8TE04 598 aa15.4■□□□□ 0.06
XRCC3-208ENST00000554811 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
XRCC3-208ENST00000554811 MORC1Q86VD1 984 aa15.39■□□□□ 0.05
XRCC3-208ENST00000554811 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
XRCC3-208ENST00000554811 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
XRCC3-208ENST00000554811 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
XRCC3-208ENST00000554811 CCDC141Q6ZP82 1450 aa15.38■□□□□ 0.05
XRCC3-208ENST00000554811 U2SURPO15042 1029 aaKnown RBP15.38■□□□□ 0.05
XRCC3-208ENST00000554811 KDM5CP41229 1560 aa15.38■□□□□ 0.05
XRCC3-208ENST00000554811 DDRGK1Q96HY6 314 aa15.38■□□□□ 0.05
XRCC3-208ENST00000554811 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
XRCC3-208ENST00000554811 RNF123Q5XPI4 1314 aa15.37■□□□□ 0.05
XRCC3-208ENST00000554811 PRAG1Q86YV5 1406 aa15.37■□□□□ 0.05
XRCC3-208ENST00000554811 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
XRCC3-208ENST00000554811 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
XRCC3-208ENST00000554811 ITSN2Q9NZM3 1697 aa15.36■□□□□ 0.05
XRCC3-208ENST00000554811 EIF5BO60841 1220 aaKnown RBP15.36■□□□□ 0.05
XRCC3-208ENST00000554811 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
XRCC3-208ENST00000554811 SYCP2Q9BX26 1530 aa15.36■□□□□ 0.05
XRCC3-208ENST00000554811 FAM135AQ9P2D6 1515 aa15.36■□□□□ 0.05
XRCC3-208ENST00000554811 PARD3Q8TEW0 1356 aa15.36■□□□□ 0.05
XRCC3-208ENST00000554811 MBD5Q9P267 1494 aa15.34■□□□□ 0.05
XRCC3-208ENST00000554811 PLEKHH1Q9ULM0 1364 aa15.34■□□□□ 0.05
XRCC3-208ENST00000554811 U2AF1L5P0DN76 240 aaPredicted RBP15.33■□□□□ 0.04
XRCC3-208ENST00000554811 U2AF1Q01081 240 aaKnown RBP eCLIP15.33■□□□□ 0.04
XRCC3-208ENST00000554811 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.04
XRCC3-208ENST00000554811 DUSP27Q5VZP5 1158 aa15.33■□□□□ 0.04
XRCC3-208ENST00000554811 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
XRCC3-208ENST00000554811 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
XRCC3-208ENST00000554811 ADGRL2O95490 1459 aa15.32■□□□□ 0.04
XRCC3-208ENST00000554811 A2MP01023 1474 aa15.32■□□□□ 0.04
XRCC3-208ENST00000554811 MS4A1P11836 297 aa15.31■□□□□ 0.04
XRCC3-208ENST00000554811 FAM161AQ3B820 660 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms