RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PPP6R1Q9UPN7 881 aa5.22□□□□□ -1.57
SEC23A-207ENST00000554615 SYCP2Q9BX26 1530 aa5.22□□□□□ -1.57
SEC23A-207ENST00000554615 PLPPR3Q6T4P5 718 aa5.22□□□□□ -1.57
SEC23A-207ENST00000554615 SCAPERQ9BY12 1400 aa5.22□□□□□ -1.57
SEC23A-207ENST00000554615 ARID4BQ4LE39 1312 aaPredicted RBP5.22□□□□□ -1.57
SEC23A-207ENST00000554615 PLB1Q6P1J6 1458 aa5.2□□□□□ -1.58
SEC23A-207ENST00000554615 CDC42BPGQ6DT37 1551 aa5.2□□□□□ -1.58
SEC23A-207ENST00000554615 RIMBP3CA6NJZ7 1639 aa5.2□□□□□ -1.58
SEC23A-207ENST00000554615 RIMBP3BA6NNM3 1639 aa5.2□□□□□ -1.58
SEC23A-207ENST00000554615 RIMBP3Q9UFD9 1639 aa5.2□□□□□ -1.58
SEC23A-207ENST00000554615 TOPAZ1Q8N9V7 1692 aa5.2□□□□□ -1.58
SEC23A-207ENST00000554615 PRAG1Q86YV5 1406 aa5.2□□□□□ -1.58
SEC23A-207ENST00000554615 FANCAO15360 1455 aa5.2□□□□□ -1.58
SEC23A-207ENST00000554615 PELP1Q8IZL8 1130 aaKnown RBP5.2□□□□□ -1.58
SEC23A-207ENST00000554615 PIAS4Q8N2W9 510 aaPredicted RBP5.2□□□□□ -1.58
SEC23A-207ENST00000554615 DHX29Q7Z478 1369 aaKnown RBP5.2□□□□□ -1.58
SEC23A-207ENST00000554615 CCER2I3L3R5 266 aa5.19□□□□□ -1.58
SEC23A-207ENST00000554615 ABCC3O15438 1527 aa5.19□□□□□ -1.58
SEC23A-207ENST00000554615 RNF123Q5XPI4 1314 aa5.19□□□□□ -1.58
SEC23A-207ENST00000554615 CNTLNQ9NXG0 1405 aa5.19□□□□□ -1.58
SEC23A-207ENST00000554615 LRRC7Q96NW7 1537 aa5.19□□□□□ -1.58
SEC23A-207ENST00000554615 NALCNQ8IZF0 1738 aa5.18□□□□□ -1.58
SEC23A-207ENST00000554615 ADGRB2O60241 1585 aa5.18□□□□□ -1.58
SEC23A-207ENST00000554615 COL17A1Q9UMD9 1497 aaPredicted RBP5.18□□□□□ -1.58
SEC23A-207ENST00000554615 KTN1Q86UP2 1357 aaKnown RBP5.18□□□□□ -1.58
SEC23A-207ENST00000554615 AKAP12Q02952 1782 aa5.18□□□□□ -1.58
SEC23A-207ENST00000554615 NRKQ7Z2Y5 1582 aa5.18□□□□□ -1.58
SEC23A-207ENST00000554615 ADGRB1O14514 1584 aa5.18□□□□□ -1.58
SEC23A-207ENST00000554615 ARHGEF40Q8TER5 1519 aa5.17□□□□□ -1.58
SEC23A-207ENST00000554615 TUBGCP6Q96RT7 1819 aa5.17□□□□□ -1.58
SEC23A-207ENST00000554615 KIF13AQ9H1H9 1805 aa5.17□□□□□ -1.58
SEC23A-207ENST00000554615 MARF1Q9Y4F3 1742 aaKnown RBP5.17□□□□□ -1.58
SEC23A-207ENST00000554615 PREX1Q8TCU6 1659 aa5.17□□□□□ -1.58
SEC23A-207ENST00000554615 LRPPRCP42704 1394 aaKnown RBP5.16□□□□□ -1.58
SEC23A-207ENST00000554615 TDRD9Q8NDG6 1382 aaKnown RBP5.16□□□□□ -1.58
SEC23A-207ENST00000554615 KIF20BQ96Q89 1820 aa5.16□□□□□ -1.58
SEC23A-207ENST00000554615 QRICH2Q9H0J4 1663 aa5.16□□□□□ -1.58
SEC23A-207ENST00000554615 ERVK-7P63135 1459 aa5.16□□□□□ -1.58
SEC23A-207ENST00000554615 PLCH2O75038 1416 aa5.16□□□□□ -1.58
SEC23A-207ENST00000554615 ATP7AQ04656 1500 aa5.15□□□□□ -1.58
SEC23A-207ENST00000554615 NRXN3Q9Y4C0 1643 aa5.15□□□□□ -1.58
SEC23A-207ENST00000554615 DIP2CQ9Y2E4 1556 aa5.15□□□□□ -1.58
SEC23A-207ENST00000554615 MON2Q7Z3U7 1717 aa5.15□□□□□ -1.59
SEC23A-207ENST00000554615 BLMP54132 1417 aaPredicted RBP5.15□□□□□ -1.59
SEC23A-207ENST00000554615 CARMIL2Q6F5E8 1435 aa5.15□□□□□ -1.59
SEC23A-207ENST00000554615 AGLP35573 1532 aa5.15□□□□□ -1.59
SEC23A-207ENST00000554615 MYO5BQ9ULV0 1848 aa5.14□□□□□ -1.59
SEC23A-207ENST00000554615 A2MP01023 1474 aa5.14□□□□□ -1.59
SEC23A-207ENST00000554615 CCDC144AA2RUR9 1427 aa5.14□□□□□ -1.59
SEC23A-207ENST00000554615 MLH3Q9UHC1 1453 aa5.14□□□□□ -1.59
SEC23A-207ENST00000554615 C9orf84Q5VXU9 1444 aa5.14□□□□□ -1.59
SEC23A-207ENST00000554615 PHRF1Q9P1Y6 1649 aaKnown RBP5.14□□□□□ -1.59
SEC23A-207ENST00000554615 RGPD1P0DJD0 1748 aa5.13□□□□□ -1.59
SEC23A-207ENST00000554615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.13□□□□□ -1.59
SEC23A-207ENST00000554615 DIEXFQ68CQ4 756 aaKnown RBP5.13□□□□□ -1.59
SEC23A-207ENST00000554615 DNAJC5BQ9UF47 199 aa5.13□□□□□ -1.59
SEC23A-207ENST00000554615 PRG4Q92954 1404 aaPredicted RBP5.13□□□□□ -1.59
SEC23A-207ENST00000554615 NEXMIFQ5QGS0 1516 aa5.13□□□□□ -1.59
SEC23A-207ENST00000554615 NPC1L1Q9UHC9 1359 aa5.13□□□□□ -1.59
SEC23A-207ENST00000554615 DIP2AQ14689 1571 aa5.13□□□□□ -1.59
SEC23A-207ENST00000554615 ARHGAP31Q2M1Z3 1444 aa5.12□□□□□ -1.59
SEC23A-207ENST00000554615 UBTFP17480 764 aaKnown RBP5.12□□□□□ -1.59
SEC23A-207ENST00000554615 FAM9AQ8IZU1 332 aaPredicted RBP5.11□□□□□ -1.59
SEC23A-207ENST00000554615 SBNO2Q9Y2G9 1366 aa5.11□□□□□ -1.59
SEC23A-207ENST00000554615 DLC1Q96QB1 1528 aa5.11□□□□□ -1.59
SEC23A-207ENST00000554615 NEUROD1Q13562 356 aa5.11□□□□□ -1.59
SEC23A-207ENST00000554615 ZFYVE9O95405 1425 aa5.11□□□□□ -1.59
SEC23A-207ENST00000554615 IQSEC2Q5JU85 1478 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 ERICH6BQ5W0A0 696 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 SPATA31D1Q6ZQQ2 1576 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 ASXL1Q8IXJ9 1541 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 CAMTA1Q9Y6Y1 1673 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 ITSN1Q15811 1721 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 DIP2BQ9P265 1576 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 MED14O60244 1454 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 NEO1Q92859 1461 aa5.1□□□□□ -1.59
SEC23A-207ENST00000554615 ZNF142P52746 1687 aaPredicted RBP5.09□□□□□ -1.59
SEC23A-207ENST00000554615 MTUS2Q5JR59 1369 aa5.09□□□□□ -1.59
SEC23A-207ENST00000554615 CCDC7Q96M83 1385 aa5.09□□□□□ -1.59
SEC23A-207ENST00000554615 LRRC37A3O60309 1634 aa5.09□□□□□ -1.59
SEC23A-207ENST00000554615 C3P01024 1663 aa5.08□□□□□ -1.6
SEC23A-207ENST00000554615 CRYBG1Q9Y4K1 1723 aa5.08□□□□□ -1.6
SEC23A-207ENST00000554615 SMG6Q86US8 1419 aaKnown RBP5.08□□□□□ -1.6
SEC23A-207ENST00000554615 PARD3Q8TEW0 1356 aa5.08□□□□□ -1.6
SEC23A-207ENST00000554615 ANKRD50Q9ULJ7 1429 aa5.08□□□□□ -1.6
SEC23A-207ENST00000554615 ROCK2O75116 1388 aaKnown RBP5.08□□□□□ -1.6
SEC23A-207ENST00000554615 NOS1P29475 1434 aa5.07□□□□□ -1.6
SEC23A-207ENST00000554615 FMN2Q9NZ56 1722 aa5.07□□□□□ -1.6
SEC23A-207ENST00000554615 RSPH4AQ5TD94 716 aa5.07□□□□□ -1.6
SEC23A-207ENST00000554615 CCER1Q8TC90 406 aaPredicted RBP5.07□□□□□ -1.6
SEC23A-207ENST00000554615 DMRT2Q9Y5R5 561 aa5.07□□□□□ -1.6
SEC23A-207ENST00000554615 ADGRL1O94910 1474 aa5.07□□□□□ -1.6
SEC23A-207ENST00000554615 ADAMTS7Q9UKP4 1686 aa5.07□□□□□ -1.6
SEC23A-207ENST00000554615 NCBP3Q53F19 620 aaKnown RBP5.07□□□□□ -1.6
SEC23A-207ENST00000554615 LMTK3Q96Q04 1460 aa5.07□□□□□ -1.6
SEC23A-207ENST00000554615 CPS1P31327 1500 aa5.06□□□□□ -1.6
SEC23A-207ENST00000554615 ADRA2BP18089 450 aa5.06□□□□□ -1.6
SEC23A-207ENST00000554615 MIER1Q8N108 512 aa5.06□□□□□ -1.6
SEC23A-207ENST00000554615 ANKRD30AQ9BXX3 1397 aa5.05□□□□□ -1.6
SEC23A-207ENST00000554615 UBR1Q8IWV7 1749 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms