RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 MBD5Q9P267 1494 aa22.44■■□□□ 1.18
PPP4R3A-202ENST00000554390 UBE2Q2Q8WVN8 375 aa22.44■■□□□ 1.18
PPP4R3A-202ENST00000554390 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
PPP4R3A-202ENST00000554390 RRP1P56182 461 aaKnown RBP22.43■■□□□ 1.18
PPP4R3A-202ENST00000554390 ANKRD30AQ9BXX3 1397 aa22.43■■□□□ 1.18
PPP4R3A-202ENST00000554390 TSPY4P0CV99 314 aa22.42■■□□□ 1.18
PPP4R3A-202ENST00000554390 TSPY10P0CW01 314 aa22.42■■□□□ 1.18
PPP4R3A-202ENST00000554390 RCAN3Q9UKA8 241 aa22.42■■□□□ 1.18
PPP4R3A-202ENST00000554390 ROCK2O75116 1388 aaKnown RBP22.41■■□□□ 1.18
PPP4R3A-202ENST00000554390 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
PPP4R3A-202ENST00000554390 JPH4Q96JJ6 628 aa22.39■■□□□ 1.18
PPP4R3A-202ENST00000554390 GSE1Q14687 1217 aa22.38■■□□□ 1.17
PPP4R3A-202ENST00000554390 ADGBQ8N7X0 1667 aa22.38■■□□□ 1.17
PPP4R3A-202ENST00000554390 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
PPP4R3A-202ENST00000554390 KDM5CP41229 1560 aa22.38■■□□□ 1.17
PPP4R3A-202ENST00000554390 MYBBP1AQ9BQG0 1328 aaKnown RBP22.38■■□□□ 1.17
PPP4R3A-202ENST00000554390 MS4A1P11836 297 aa22.38■■□□□ 1.17
PPP4R3A-202ENST00000554390 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
PPP4R3A-202ENST00000554390 ITSN2Q9NZM3 1697 aa22.37■■□□□ 1.17
PPP4R3A-202ENST00000554390 C20orf194Q5TEA3 1177 aa22.33■■□□□ 1.16
PPP4R3A-202ENST00000554390 EIF5BO60841 1220 aaKnown RBP22.32■■□□□ 1.16
PPP4R3A-202ENST00000554390 SLC4A3P48751 1232 aa22.32■■□□□ 1.16
PPP4R3A-202ENST00000554390 ADGRL2O95490 1459 aa22.32■■□□□ 1.16
PPP4R3A-202ENST00000554390 CEP170Q5SW79 1584 aa22.32■■□□□ 1.16
PPP4R3A-202ENST00000554390 C9orf84Q5VXU9 1444 aa22.32■■□□□ 1.16
PPP4R3A-202ENST00000554390 CROCC2H7BZ55 1655 aa22.31■■□□□ 1.16
PPP4R3A-202ENST00000554390 NFKBIBQ15653 356 aa22.31■■□□□ 1.16
PPP4R3A-202ENST00000554390 DDRGK1Q96HY6 314 aa22.31■■□□□ 1.16
PPP4R3A-202ENST00000554390 PANK3Q9H999 370 aa22.3■■□□□ 1.16
PPP4R3A-202ENST00000554390 RALGAPBQ86X10 1494 aa22.29■■□□□ 1.16
PPP4R3A-202ENST00000554390 CRBNQ96SW2 442 aa22.29■■□□□ 1.16
PPP4R3A-202ENST00000554390 FRAT1Q92837 279 aaPredicted RBP22.28■■□□□ 1.16
PPP4R3A-202ENST00000554390 LRPPRCP42704 1394 aaKnown RBP22.28■■□□□ 1.16
PPP4R3A-202ENST00000554390 NLRP13Q86W25 1043 aa22.28■■□□□ 1.16
PPP4R3A-202ENST00000554390 RALBP1Q15311 655 aa22.27■■□□□ 1.16
PPP4R3A-202ENST00000554390 CARMIL2Q6F5E8 1435 aa22.26■■□□□ 1.15
PPP4R3A-202ENST00000554390 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
PPP4R3A-202ENST00000554390 KTN1Q86UP2 1357 aaKnown RBP22.25■■□□□ 1.15
PPP4R3A-202ENST00000554390 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
PPP4R3A-202ENST00000554390 PER1O15534 1290 aaPredicted RBP22.24■■□□□ 1.15
PPP4R3A-202ENST00000554390 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
PPP4R3A-202ENST00000554390 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
PPP4R3A-202ENST00000554390 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
PPP4R3A-202ENST00000554390 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
PPP4R3A-202ENST00000554390 ADCY10Q96PN6 1610 aa22.22■■□□□ 1.15
PPP4R3A-202ENST00000554390 SYNJ2O15056 1496 aa22.21■■□□□ 1.15
PPP4R3A-202ENST00000554390 ADAMTS8Q9UP79 889 aa22.2■■□□□ 1.15
PPP4R3A-202ENST00000554390 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
PPP4R3A-202ENST00000554390 ATP10BO94823 1461 aa22.19■■□□□ 1.14
PPP4R3A-202ENST00000554390 DAXXQ9UER7 740 aaPredicted RBP22.17■■□□□ 1.14
PPP4R3A-202ENST00000554390 CCDC146Q8IYE0 955 aa22.17■■□□□ 1.14
PPP4R3A-202ENST00000554390 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
PPP4R3A-202ENST00000554390 CCDC144AA2RUR9 1427 aa22.16■■□□□ 1.14
PPP4R3A-202ENST00000554390 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
PPP4R3A-202ENST00000554390 TESK2Q96S53 571 aa22.16■■□□□ 1.14
PPP4R3A-202ENST00000554390 PARD3Q8TEW0 1356 aa22.14■■□□□ 1.14
PPP4R3A-202ENST00000554390 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
PPP4R3A-202ENST00000554390 RGS3P49796 1198 aa22.13■■□□□ 1.13
PPP4R3A-202ENST00000554390 SHANK2Q9UPX8 1470 aa22.13■■□□□ 1.13
PPP4R3A-202ENST00000554390 ABCA8O94911 1581 aa22.1■■□□□ 1.13
PPP4R3A-202ENST00000554390 PRAG1Q86YV5 1406 aa22.1■■□□□ 1.13
PPP4R3A-202ENST00000554390 RSPH6AQ9H0K4 717 aa22.09■■□□□ 1.13
PPP4R3A-202ENST00000554390 FAM135AQ9P2D6 1515 aa22.09■■□□□ 1.13
PPP4R3A-202ENST00000554390 FRAT2O75474 233 aaPredicted RBP22.09■■□□□ 1.13
PPP4R3A-202ENST00000554390 NUP160Q12769 1436 aa22.09■■□□□ 1.13
PPP4R3A-202ENST00000554390 FAM43AQ8N2R8 423 aa22.08■■□□□ 1.12
PPP4R3A-202ENST00000554390 KDM5DQ9BY66 1539 aa22.07■■□□□ 1.12
PPP4R3A-202ENST00000554390 PLA2R1Q13018 1463 aa22.06■■□□□ 1.12
PPP4R3A-202ENST00000554390 PTPRGP23470 1445 aa22.06■■□□□ 1.12
PPP4R3A-202ENST00000554390 TMF1P82094 1093 aa22.05■■□□□ 1.12
PPP4R3A-202ENST00000554390 A2MP01023 1474 aa22.05■■□□□ 1.12
PPP4R3A-202ENST00000554390 E9PCH4 1651 aa22.05■■□□□ 1.12
PPP4R3A-202ENST00000554390 PLEKHH1Q9ULM0 1364 aa22.05■■□□□ 1.12
PPP4R3A-202ENST00000554390 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
PPP4R3A-202ENST00000554390 SPINK5Q9NQ38 1064 aaPredicted RBP22.04■■□□□ 1.12
PPP4R3A-202ENST00000554390 CCDC141Q6ZP82 1450 aa22.04■■□□□ 1.12
PPP4R3A-202ENST00000554390 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
PPP4R3A-202ENST00000554390 PLEKHH2Q8IVE3 1493 aa22.04■■□□□ 1.12
PPP4R3A-202ENST00000554390 SAMD9LQ8IVG5 1584 aa22.03■■□□□ 1.12
PPP4R3A-202ENST00000554390 KNSTRNQ9Y448 316 aa22.02■■□□□ 1.12
PPP4R3A-202ENST00000554390 ERBINQ96RT1 1412 aa22.01■■□□□ 1.11
PPP4R3A-202ENST00000554390 FAM161AQ3B820 660 aa22.01■■□□□ 1.11
PPP4R3A-202ENST00000554390 KDM2BQ8NHM5 1336 aa22.01■■□□□ 1.11
PPP4R3A-202ENST00000554390 PPP2R1AP30153 589 aa22■■□□□ 1.11
PPP4R3A-202ENST00000554390 SYCP2Q9BX26 1530 aa22■■□□□ 1.11
PPP4R3A-202ENST00000554390 C8orf34Q49A92 452 aa22■■□□□ 1.11
PPP4R3A-202ENST00000554390 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
PPP4R3A-202ENST00000554390 BCAR3O75815 825 aa21.99■■□□□ 1.11
PPP4R3A-202ENST00000554390 TNNT2P45379 298 aaPredicted RBP21.99■■□□□ 1.11
PPP4R3A-202ENST00000554390 DMRT2Q9Y5R5 561 aa21.99■■□□□ 1.11
PPP4R3A-202ENST00000554390 NEUROD2Q15784 382 aa21.98■■□□□ 1.11
PPP4R3A-202ENST00000554390 DUSP27Q5VZP5 1158 aa21.98■■□□□ 1.11
PPP4R3A-202ENST00000554390 ARHGEF5Q12774 1597 aa21.97■■□□□ 1.11
PPP4R3A-202ENST00000554390 APAF1O14727 1248 aa21.96■■□□□ 1.11
PPP4R3A-202ENST00000554390 CDC42BPBQ9Y5S2 1711 aa21.96■■□□□ 1.11
PPP4R3A-202ENST00000554390 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
PPP4R3A-202ENST00000554390 CENPQQ7L2Z9 268 aaPredicted RBP21.96■■□□□ 1.11
PPP4R3A-202ENST00000554390 COL17A1Q9UMD9 1497 aaPredicted RBP21.95■■□□□ 1.1
PPP4R3A-202ENST00000554390 MAGI2Q86UL8 1455 aa21.94■■□□□ 1.1
PPP4R3A-202ENST00000554390 GOLGA2Q08379 1002 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms