RNA–Protein interactions for RNA: ENST00000554357.5

TRIP11-202, Transcript of thyroid hormone receptor interactor 11, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIP11, Length 5,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP11-202ENST00000554357 RDXP35241 583 aaKnown RBP4.13□□□□□ -1.75
TRIP11-202ENST00000554357 ERICH6BQ5W0A0 696 aa4.13□□□□□ -1.75
TRIP11-202ENST00000554357 TRERF1Q96PN7 1200 aa4.13□□□□□ -1.75
TRIP11-202ENST00000554357 IPO9Q96P70 1041 aaKnown RBP4.13□□□□□ -1.75
TRIP11-202ENST00000554357 SLKQ9H2G2 1235 aaPredicted RBP4.13□□□□□ -1.75
TRIP11-202ENST00000554357 LETM1O95202 739 aaPredicted RBP4.12□□□□□ -1.75
TRIP11-202ENST00000554357 ZRANB1Q9UGI0 708 aa4.12□□□□□ -1.75
TRIP11-202ENST00000554357 GOLGA6L4A6NEF3 574 aa4.12□□□□□ -1.75
TRIP11-202ENST00000554357 CTDP1Q9Y5B0 961 aaPredicted RBP4.12□□□□□ -1.75
TRIP11-202ENST00000554357 SPOUT1Q5T280 376 aaKnown RBP4.12□□□□□ -1.75
TRIP11-202ENST00000554357 CPLX3Q8WVH0 158 aa4.12□□□□□ -1.75
TRIP11-202ENST00000554357 PHF14O94880 888 aa4.12□□□□□ -1.75
TRIP11-202ENST00000554357 FAM50AQ14320 339 aaKnown RBP4.12□□□□□ -1.75
TRIP11-202ENST00000554357 UPF1Q92900 1129 aaKnown RBP eCLIP4.12□□□□□ -1.75
TRIP11-202ENST00000554357 CEP89Q96ST8 783 aa4.11□□□□□ -1.75
TRIP11-202ENST00000554357 MTMR7Q9Y216 660 aa4.11□□□□□ -1.75
TRIP11-202ENST00000554357 PDCL2Q8N4E4 241 aa4.11□□□□□ -1.75
TRIP11-202ENST00000554357 HAX1O00165 279 aa4.11□□□□□ -1.75
TRIP11-202ENST00000554357 NEUROD4Q9HD90 331 aa4.11□□□□□ -1.75
TRIP11-202ENST00000554357 GOLGA8CPA6NN73 597 aa4.11□□□□□ -1.75
TRIP11-202ENST00000554357 WDR75Q8IWA0 830 aaKnown RBP4.11□□□□□ -1.75
TRIP11-202ENST00000554357 KIF20AO95235 890 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 GORABQ5T7V8 394 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 BTN2A1Q7KYR7 527 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 PNMA1Q8ND90 353 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 BCL11BQ9C0K0 894 aaPredicted RBP4.1□□□□□ -1.75
TRIP11-202ENST00000554357 CD44P16070 742 aaKnown RBP4.1□□□□□ -1.75
TRIP11-202ENST00000554357 YY1P25490 414 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 TBC1D8BQ0IIM8 1120 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 TMEM132AQ24JP5 1023 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 CHADLQ6NUI6 762 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 CHMP7Q8WUX9 453 aaPredicted RBP4.1□□□□□ -1.75
TRIP11-202ENST00000554357 POLR3EQ9NVU0 708 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 GTF2E1P29083 439 aaPredicted RBP4.1□□□□□ -1.75
TRIP11-202ENST00000554357 GNL2Q13823 731 aaKnown RBP4.1□□□□□ -1.75
TRIP11-202ENST00000554357 NAP1L1P55209 391 aaKnown RBP4.1□□□□□ -1.75
TRIP11-202ENST00000554357 NUTM1Q86Y26 1132 aa4.1□□□□□ -1.75
TRIP11-202ENST00000554357 ZNF622Q969S3 477 aaKnown RBP eCLIP4.1□□□□□ -1.754e-6■■■□□ 15
TRIP11-202ENST00000554357 TSPY2A6NKD2 308 aa4.09□□□□□ -1.75
TRIP11-202ENST00000554357 TSPY3P0CV98 308 aa4.09□□□□□ -1.75
TRIP11-202ENST00000554357 TSPY8P0CW00 308 aa4.09□□□□□ -1.75
TRIP11-202ENST00000554357 TSPY1Q01534 308 aa4.09□□□□□ -1.75
TRIP11-202ENST00000554357 DDX46Q7L014 1031 aaKnown RBP4.09□□□□□ -1.75
TRIP11-202ENST00000554357 HRCP23327 699 aa4.09□□□□□ -1.75
TRIP11-202ENST00000554357 MKRN3Q13064 507 aaKnown RBP4.09□□□□□ -1.75
TRIP11-202ENST00000554357 SAFB2Q14151 953 aaKnown RBP eCLIP4.09□□□□□ -1.76
TRIP11-202ENST00000554357 FOXD4L5Q5VV16 416 aaPredicted RBP4.09□□□□□ -1.76
TRIP11-202ENST00000554357 FOXD4L4Q8WXT5 416 aaPredicted RBP4.09□□□□□ -1.76
TRIP11-202ENST00000554357 PDE4CQ08493 712 aa4.08□□□□□ -1.76
TRIP11-202ENST00000554357 IFNLR1Q8IU57 520 aaPredicted RBP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 NASPP49321 788 aaPredicted RBP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 NAP1L5Q96NT1 182 aaPredicted RBP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 CHGBP05060 677 aa4.08□□□□□ -1.76
TRIP11-202ENST00000554357 ZRSR2Q15696 482 aaKnown RBP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 CENPBP07199 599 aaPredicted RBP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 NAP1L4Q99733 375 aaKnown RBP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 SGIP1Q9BQI5 828 aa4.08□□□□□ -1.76
TRIP11-202ENST00000554357 PATL2C9JE40 543 aaKnown RBP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 XPCQ01831 940 aaPredicted RBP4.08□□□□□ -1.76
TRIP11-202ENST00000554357 STRN4Q9NRL3 753 aa4.08□□□□□ -1.76
TRIP11-202ENST00000554357 ZNF467Q7Z7K2 595 aaPredicted RBP4.07□□□□□ -1.76
TRIP11-202ENST00000554357 SHQ1Q6PI26 577 aaKnown RBP4.07□□□□□ -1.76
TRIP11-202ENST00000554357 ZNF330Q9Y3S2 320 aaPredicted RBP4.07□□□□□ -1.76
TRIP11-202ENST00000554357 POTEHQ6S545 545 aa4.07□□□□□ -1.76
TRIP11-202ENST00000554357 GPIHBP1Q8IV16 184 aa4.07□□□□□ -1.76
TRIP11-202ENST00000554357 GJA3Q9Y6H8 435 aa4.07□□□□□ -1.76
TRIP11-202ENST00000554357 CHRM1P11229 460 aaPredicted RBP4.07□□□□□ -1.76
TRIP11-202ENST00000554357 PMFBP1Q8TBY8 1022 aa4.07□□□□□ -1.76
TRIP11-202ENST00000554357 TOMM22Q9NS69 142 aa4.07□□□□□ -1.76
TRIP11-202ENST00000554357 FAM160A1Q05DH4 1040 aa4.06□□□□□ -1.76
TRIP11-202ENST00000554357 CLUL1Q15846 466 aa4.06□□□□□ -1.76
TRIP11-202ENST00000554357 CCDC27Q2M243 656 aa4.06□□□□□ -1.76
TRIP11-202ENST00000554357 HINFPQ9BQA5 517 aa4.06□□□□□ -1.76
TRIP11-202ENST00000554357 PPP1R12AO14974 1030 aaPredicted RBP4.06□□□□□ -1.76
TRIP11-202ENST00000554357 NUBP1P53384 320 aa4.06□□□□□ -1.76
TRIP11-202ENST00000554357 LMOD3Q0VAK6 560 aa4.06□□□□□ -1.76
TRIP11-202ENST00000554357 RDH13Q8NBN7 331 aa4.06□□□□□ -1.76
TRIP11-202ENST00000554357 CCND1P24385 295 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 CTHP32929 405 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 RSPH4AQ5TD94 716 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 WWC2Q6AWC2 1192 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 UIMC1Q96RL1 719 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 PDCL3Q9H2J4 239 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 NF2P35240 595 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 GTF2F1P35269 517 aaKnown RBP eCLIP4.05□□□□□ -1.76
TRIP11-202ENST00000554357 GOLGA6L22H0YM25 854 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 PLIN1O60240 522 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 TBC1D12O60347 775 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 HSP90AA1P07900 732 aaKnown RBP4.05□□□□□ -1.76
TRIP11-202ENST00000554357 B4GALNT3Q6L9W6 998 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 WDR48Q8TAF3 677 aa4.05□□□□□ -1.76
TRIP11-202ENST00000554357 PYGBP11216 843 aa4.04□□□□□ -1.76
TRIP11-202ENST00000554357 WWC3Q9ULE0 1092 aa4.04□□□□□ -1.76
TRIP11-202ENST00000554357 SHROOM4Q9ULL8 1493 aa4.04□□□□□ -1.76
TRIP11-202ENST00000554357 C19orf67A6NJJ6 358 aa4.04□□□□□ -1.76
TRIP11-202ENST00000554357 RIOK3O14730 519 aaKnown RBP4.04□□□□□ -1.76
TRIP11-202ENST00000554357 VGFO15240 615 aaPredicted RBP4.04□□□□□ -1.76
TRIP11-202ENST00000554357 SLC24A3Q9HC58 644 aa4.04□□□□□ -1.76
TRIP11-202ENST00000554357 PPFIA3O75145 1194 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms