RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 NUDT7P0C024 238 aa10.01□□□□□ -0.81
MTHFD1-206ENST00000554353 BRPF1P55201 1214 aaPredicted RBP10.01□□□□□ -0.81
MTHFD1-206ENST00000554353 EPAS1Q99814 870 aa10.01□□□□□ -0.81
MTHFD1-206ENST00000554353 MAP3K7O43318 606 aa10□□□□□ -0.81
MTHFD1-206ENST00000554353 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
MTHFD1-206ENST00000554353 PCDHGA10Q9Y5H3 936 aa10□□□□□ -0.81
MTHFD1-206ENST00000554353 GNPATO15228 680 aa9.98□□□□□ -0.81
MTHFD1-206ENST00000554353 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-206ENST00000554353 TYW1BQ6NUM6 668 aa9.98□□□□□ -0.81
MTHFD1-206ENST00000554353 KDM4FA0A1W2PPD8 638 aa9.97□□□□□ -0.81
MTHFD1-206ENST00000554353 HIC1Q14526 733 aa9.97□□□□□ -0.81
MTHFD1-206ENST00000554353 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
MTHFD1-206ENST00000554353 CDHR5Q9HBB8 845 aa9.97□□□□□ -0.81
MTHFD1-206ENST00000554353 ABCC9O60706 1549 aa9.97□□□□□ -0.81
MTHFD1-206ENST00000554353 PTGDRQ13258 359 aa9.96□□□□□ -0.82
MTHFD1-206ENST00000554353 ZNF454Q8N9F8 522 aa9.96□□□□□ -0.82
MTHFD1-206ENST00000554353 FECHP22830 423 aa9.95□□□□□ -0.82
MTHFD1-206ENST00000554353 FOSBP53539 338 aa9.95□□□□□ -0.82
MTHFD1-206ENST00000554353 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
MTHFD1-206ENST00000554353 MINK1Q8N4C8 1332 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-206ENST00000554353 TRIM66O15016 1216 aa9.94□□□□□ -0.82
MTHFD1-206ENST00000554353 MAP2K5Q13163 448 aa9.94□□□□□ -0.82
MTHFD1-206ENST00000554353 TSR1Q2NL82 804 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-206ENST00000554353 CCDC180Q9P1Z9 1646 aa9.93□□□□□ -0.82
MTHFD1-206ENST00000554353 IRF6O14896 467 aa9.92□□□□□ -0.82
MTHFD1-206ENST00000554353 TMEM132AQ24JP5 1023 aa9.92□□□□□ -0.82
MTHFD1-206ENST00000554353 CCDC102AQ96A19 550 aa9.92□□□□□ -0.82
MTHFD1-206ENST00000554353 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
MTHFD1-206ENST00000554353 GPBP1L1Q9HC44 474 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-206ENST00000554353 NPDC1Q9NQX5 325 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-206ENST00000554353 LHX6Q9UPM6 363 aa9.91□□□□□ -0.82
MTHFD1-206ENST00000554353 PDE4DQ08499 809 aa9.9□□□□□ -0.82
MTHFD1-206ENST00000554353 C6orf132Q5T0Z8 1188 aa9.89□□□□□ -0.83
MTHFD1-206ENST00000554353 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
MTHFD1-206ENST00000554353 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
MTHFD1-206ENST00000554353 ERBB3P21860 1342 aa9.87□□□□□ -0.83
MTHFD1-206ENST00000554353 VARS2Q5ST30 1063 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-206ENST00000554353 PPP4R3BQ5MIZ7 849 aa9.86□□□□□ -0.83
MTHFD1-206ENST00000554353 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
MTHFD1-206ENST00000554353 PSDA5PKW4 1024 aaPredicted RBP9.84□□□□□ -0.83
MTHFD1-206ENST00000554353 CERKQ8TCT0 537 aa9.83□□□□□ -0.84
MTHFD1-206ENST00000554353 TTLL12Q14166 644 aaPredicted RBP9.82□□□□□ -0.84
MTHFD1-206ENST00000554353 PADI6Q6TGC4 694 aa9.82□□□□□ -0.84
MTHFD1-206ENST00000554353 AMHR2Q16671 573 aa9.81□□□□□ -0.84
MTHFD1-206ENST00000554353 FAM161AQ3B820 660 aa9.81□□□□□ -0.84
MTHFD1-206ENST00000554353 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
MTHFD1-206ENST00000554353 GTF3C3Q9Y5Q9 886 aa9.8□□□□□ -0.84
MTHFD1-206ENST00000554353 PARP9Q8IXQ6 854 aa9.79□□□□□ -0.84
MTHFD1-206ENST00000554353 BCL2L12Q9HB09 334 aa9.79□□□□□ -0.84
MTHFD1-206ENST00000554353 COL9A1P20849 921 aa9.78□□□□□ -0.84
MTHFD1-206ENST00000554353 PTPREP23469 700 aa9.78□□□□□ -0.84
MTHFD1-206ENST00000554353 PRSS12P56730 875 aa9.78□□□□□ -0.84
MTHFD1-206ENST00000554353 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
MTHFD1-206ENST00000554353 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
MTHFD1-206ENST00000554353 CDCA7LQ96GN5 454 aa9.77□□□□□ -0.85
MTHFD1-206ENST00000554353 OATP04181 439 aa9.75□□□□□ -0.85
MTHFD1-206ENST00000554353 KCNK17Q96T54 332 aa9.75□□□□□ -0.85
MTHFD1-206ENST00000554353 PHOX2BQ99453 314 aa9.75□□□□□ -0.85
MTHFD1-206ENST00000554353 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
MTHFD1-206ENST00000554353 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
MTHFD1-206ENST00000554353 PPP1R3GB7ZBB8 358 aa9.74□□□□□ -0.85
MTHFD1-206ENST00000554353 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
MTHFD1-206ENST00000554353 GIGYF2Q6Y7W6 1299 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-206ENST00000554353 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
MTHFD1-206ENST00000554353 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
MTHFD1-206ENST00000554353 METTL3Q86U44 580 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-206ENST00000554353 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
MTHFD1-206ENST00000554353 DAXXQ9UER7 740 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-206ENST00000554353 CLCN1P35523 988 aa9.72□□□□□ -0.85
MTHFD1-206ENST00000554353 KCNH8Q96L42 1107 aa9.72□□□□□ -0.85
MTHFD1-206ENST00000554353 REPIN1Q9BWE0 567 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-206ENST00000554353 RBM46Q8TBY0 533 aaKnown RBP9.71□□□□□ -0.86
MTHFD1-206ENST00000554353 PXYLP1Q8TE99 480 aa9.71□□□□□ -0.86
MTHFD1-206ENST00000554353 FAM198AQ9UFP1 575 aa9.71□□□□□ -0.86
MTHFD1-206ENST00000554353 AXIN2Q9Y2T1 843 aa9.71□□□□□ -0.86
MTHFD1-206ENST00000554353 DDRGK1Q96HY6 314 aa9.7□□□□□ -0.86
MTHFD1-206ENST00000554353 GPCPD1Q9NPB8 672 aa9.7□□□□□ -0.86
MTHFD1-206ENST00000554353 TSKSQ9UJT2 592 aa9.7□□□□□ -0.86
MTHFD1-206ENST00000554353 TRIM6-TRIM34B2RNG4 842 aa9.68□□□□□ -0.86
MTHFD1-206ENST00000554353 MS4A1P11836 297 aa9.68□□□□□ -0.86
MTHFD1-206ENST00000554353 PSEN2P49810 448 aa9.68□□□□□ -0.86
MTHFD1-206ENST00000554353 PROX2Q3B8N5 592 aa9.68□□□□□ -0.86
MTHFD1-206ENST00000554353 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
MTHFD1-206ENST00000554353 NUDT18Q6ZVK8 323 aa9.67□□□□□ -0.86
MTHFD1-206ENST00000554353 PACS2Q86VP3 889 aa9.67□□□□□ -0.86
MTHFD1-206ENST00000554353 TMUB1Q9BVT8 246 aa9.67□□□□□ -0.86
MTHFD1-206ENST00000554353 NBPF26B4DH59 902 aa9.66□□□□□ -0.86
MTHFD1-206ENST00000554353 SSTR3P32745 418 aaPredicted RBP9.66□□□□□ -0.86
MTHFD1-206ENST00000554353 PNMA3Q9UL41 463 aa9.66□□□□□ -0.86
MTHFD1-206ENST00000554353 PBX2P40425 430 aa9.65□□□□□ -0.86
MTHFD1-206ENST00000554353 TATDN2Q93075 761 aa9.65□□□□□ -0.86
MTHFD1-206ENST00000554353 RCCD1A6NED2 376 aa9.64□□□□□ -0.87
MTHFD1-206ENST00000554353 C3orf80F5H4A9 247 aa9.64□□□□□ -0.87
MTHFD1-206ENST00000554353 SMAPO00193 183 aa9.64□□□□□ -0.87
MTHFD1-206ENST00000554353 ARHGAP33O14559 1287 aa9.64□□□□□ -0.87
MTHFD1-206ENST00000554353 LSM11P83369 360 aaKnown RBP eCLIP9.64□□□□□ -0.87
MTHFD1-206ENST00000554353 DMRTA1Q5VZB9 504 aa9.64□□□□□ -0.87
MTHFD1-206ENST00000554353 EYA1Q99502 592 aa9.64□□□□□ -0.87
MTHFD1-206ENST00000554353 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
MTHFD1-206ENST00000554353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms