RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 RTEL1-TNFRSF6BF6WH68 1400 aa20.12■□□□□ 0.81
XRCC3-206ENST00000554170 UBAP1LF5GYI3 381 aa20.12■□□□□ 0.81
XRCC3-206ENST00000554170 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.81
XRCC3-206ENST00000554170 MAP3K1Q13233 1512 aa20.08■□□□□ 0.81
XRCC3-206ENST00000554170 FAM135AQ9P2D6 1515 aa20.07■□□□□ 0.8
XRCC3-206ENST00000554170 NEURL4Q96JN8 1562 aa20.07■□□□□ 0.8
XRCC3-206ENST00000554170 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
XRCC3-206ENST00000554170 PZPP20742 1482 aa20.05■□□□□ 0.8
XRCC3-206ENST00000554170 CCDC141Q6ZP82 1450 aa20.05■□□□□ 0.8
XRCC3-206ENST00000554170 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
XRCC3-206ENST00000554170 TNRQ92752 1358 aa20.04■□□□□ 0.8
XRCC3-206ENST00000554170 CPS1P31327 1500 aa20.03■□□□□ 0.8
XRCC3-206ENST00000554170 CAMSAP2Q08AD1 1489 aa20.03■□□□□ 0.8
XRCC3-206ENST00000554170 KIF3BO15066 747 aa20.02■□□□□ 0.8
XRCC3-206ENST00000554170 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
XRCC3-206ENST00000554170 FBXO31Q5XUX0 539 aaPredicted RBP20.02■□□□□ 0.8
XRCC3-206ENST00000554170 NCOA2Q15596 1464 aa20■□□□□ 0.79
XRCC3-206ENST00000554170 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
XRCC3-206ENST00000554170 RSPH4AQ5TD94 716 aa19.98■□□□□ 0.79
XRCC3-206ENST00000554170 ARHGEF5Q12774 1597 aa19.98■□□□□ 0.79
XRCC3-206ENST00000554170 WASHC2CQ9Y4E1 1318 aa19.98■□□□□ 0.79
XRCC3-206ENST00000554170 NLRP1Q9C000 1473 aa19.98■□□□□ 0.79
XRCC3-206ENST00000554170 DEPDC5O75140 1603 aa19.97■□□□□ 0.79
XRCC3-206ENST00000554170 VWDEQ8N2E2 1590 aa19.96■□□□□ 0.79
XRCC3-206ENST00000554170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.95■□□□□ 0.79
XRCC3-206ENST00000554170 UGGT1Q9NYU2 1555 aa19.95■□□□□ 0.78
XRCC3-206ENST00000554170 MIA2Q96PC5 1412 aa19.95■□□□□ 0.78
XRCC3-206ENST00000554170 TOM1O60784 492 aa19.95■□□□□ 0.78
XRCC3-206ENST00000554170 ANKLE2Q86XL3 938 aa19.95■□□□□ 0.78
XRCC3-206ENST00000554170 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
XRCC3-206ENST00000554170 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
XRCC3-206ENST00000554170 HSPA1LP34931 641 aa19.94■□□□□ 0.78
XRCC3-206ENST00000554170 PIP4K2BP78356 416 aa19.94■□□□□ 0.78
XRCC3-206ENST00000554170 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
XRCC3-206ENST00000554170 MED14O60244 1454 aa19.93■□□□□ 0.78
XRCC3-206ENST00000554170 THEMISQ8N1K5 641 aaPredicted RBP19.93■□□□□ 0.78
XRCC3-206ENST00000554170 IQGAP1P46940 1657 aa19.93■□□□□ 0.78
XRCC3-206ENST00000554170 ZC3H13Q5T200 1668 aaKnown RBP19.93■□□□□ 0.78
XRCC3-206ENST00000554170 NPHP4O75161 1426 aaPredicted RBP19.91■□□□□ 0.78
XRCC3-206ENST00000554170 ALKQ9UM73 1620 aa19.9■□□□□ 0.78
XRCC3-206ENST00000554170 CFAP65Q6ZU64 1925 aaKnown RBP19.9■□□□□ 0.78
XRCC3-206ENST00000554170 STRCP1A6NGW2 1772 aa19.89■□□□□ 0.77
XRCC3-206ENST00000554170 ABCC3O15438 1527 aa19.89■□□□□ 0.77
XRCC3-206ENST00000554170 TSPY4P0CV99 314 aa19.89■□□□□ 0.77
XRCC3-206ENST00000554170 TSPY10P0CW01 314 aa19.89■□□□□ 0.77
XRCC3-206ENST00000554170 MAST1Q9Y2H9 1570 aa19.89■□□□□ 0.77
XRCC3-206ENST00000554170 EIF2AK4Q9P2K8 1649 aaKnown RBP19.88■□□□□ 0.77
XRCC3-206ENST00000554170 CEP152O94986 1710 aa19.85■□□□□ 0.77
XRCC3-206ENST00000554170 MYOM3Q5VTT5 1437 aa19.85■□□□□ 0.77
XRCC3-206ENST00000554170 MROH1Q8NDA8 1641 aa19.84■□□□□ 0.77
XRCC3-206ENST00000554170 SYNMO15061 1565 aa19.84■□□□□ 0.77
XRCC3-206ENST00000554170 ERVK-7P63135 1459 aa19.84■□□□□ 0.77
XRCC3-206ENST00000554170 UBR1Q8IWV7 1749 aa19.83■□□□□ 0.77
XRCC3-206ENST00000554170 LRRC7Q96NW7 1537 aa19.81■□□□□ 0.76
XRCC3-206ENST00000554170 DUOX2Q9NRD8 1548 aa19.76■□□□□ 0.75
XRCC3-206ENST00000554170 SCAF11Q99590 1463 aaKnown RBP19.76■□□□□ 0.75
XRCC3-206ENST00000554170 XIRP1Q702N8 1843 aaKnown RBP19.75■□□□□ 0.75
XRCC3-206ENST00000554170 PPARGC1BQ86YN6 1023 aaKnown RBP19.75■□□□□ 0.75
XRCC3-206ENST00000554170 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
XRCC3-206ENST00000554170 PRDM15P57071 1507 aaPredicted RBP19.74■□□□□ 0.75
XRCC3-206ENST00000554170 FGD6Q6ZV73 1430 aa19.74■□□□□ 0.75
XRCC3-206ENST00000554170 CROCC2H7BZ55 1655 aa19.74■□□□□ 0.75
XRCC3-206ENST00000554170 SLIT1O75093 1534 aa19.73■□□□□ 0.75
XRCC3-206ENST00000554170 ARHGAP23Q9P227 1491 aa19.73■□□□□ 0.75
XRCC3-206ENST00000554170 ARHGAP31Q2M1Z3 1444 aa19.71■□□□□ 0.75
XRCC3-206ENST00000554170 PTPN23Q9H3S7 1636 aa19.7■□□□□ 0.74
XRCC3-206ENST00000554170 LTKP29376 864 aa19.69■□□□□ 0.74
XRCC3-206ENST00000554170 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
XRCC3-206ENST00000554170 PIK3C2BO00750 1634 aa19.69■□□□□ 0.74
XRCC3-206ENST00000554170 KIF15Q9NS87 1388 aa19.69■□□□□ 0.74
XRCC3-206ENST00000554170 ERBINQ96RT1 1412 aa19.68■□□□□ 0.74
XRCC3-206ENST00000554170 FAM50AQ14320 339 aaKnown RBP19.68■□□□□ 0.74
XRCC3-206ENST00000554170 TXNDC2Q86VQ3 553 aa19.67■□□□□ 0.74
XRCC3-206ENST00000554170 KDM5AP29375 1690 aaKnown RBP19.66■□□□□ 0.74
XRCC3-206ENST00000554170 EID1Q9Y6B2 187 aa19.64■□□□□ 0.73
XRCC3-206ENST00000554170 ABCC5O15440 1437 aa19.64■□□□□ 0.73
XRCC3-206ENST00000554170 TMEM2Q9UHN6 1383 aa19.62■□□□□ 0.73
XRCC3-206ENST00000554170 RRP7BPQ9NSQ0 103 aa19.62■□□□□ 0.73
XRCC3-206ENST00000554170 DAPK1P53355 1430 aa19.6■□□□□ 0.73
XRCC3-206ENST00000554170 EFCAB6Q5THR3 1501 aa19.6■□□□□ 0.73
XRCC3-206ENST00000554170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.73
XRCC3-206ENST00000554170 LMTK2Q8IWU2 1503 aa19.59■□□□□ 0.73
XRCC3-206ENST00000554170 KANK1Q14678 1352 aa19.58■□□□□ 0.73
XRCC3-206ENST00000554170 FAM135BQ49AJ0 1406 aa19.58■□□□□ 0.72
XRCC3-206ENST00000554170 RGS17Q9UGC6 210 aaPredicted RBP19.57■□□□□ 0.72
XRCC3-206ENST00000554170 STAG3Q9UJ98 1225 aa19.57■□□□□ 0.72
XRCC3-206ENST00000554170 TET3O43151 1660 aa19.56■□□□□ 0.72
XRCC3-206ENST00000554170 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
XRCC3-206ENST00000554170 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
XRCC3-206ENST00000554170 TMEM94Q12767 1356 aa19.55■□□□□ 0.72
XRCC3-206ENST00000554170 IDI1Q13907 227 aa19.54■□□□□ 0.72
XRCC3-206ENST00000554170 ANKRD30AQ9BXX3 1397 aa19.54■□□□□ 0.72
XRCC3-206ENST00000554170 ADGRB3O60242 1522 aa19.53■□□□□ 0.72
XRCC3-206ENST00000554170 NWD1Q149M9 1564 aa19.53■□□□□ 0.72
XRCC3-206ENST00000554170 KCNA6P17658 529 aa19.52■□□□□ 0.72
XRCC3-206ENST00000554170 NOS1P29475 1434 aa19.51■□□□□ 0.71
XRCC3-206ENST00000554170 NKTRP30414 1462 aaKnown RBP19.51■□□□□ 0.71
XRCC3-206ENST00000554170 ITGAEP38570 1179 aa19.5■□□□□ 0.71
XRCC3-206ENST00000554170 MYO5BQ9ULV0 1848 aa19.5■□□□□ 0.71
XRCC3-206ENST00000554170 RRBP1Q9P2E9 1410 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms