RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
ATXN3-224ENST00000554040 G3V3G9 751 aa12.29□□□□□ -0.44
ATXN3-224ENST00000554040 TNIKQ9UKE5 1360 aa12.29□□□□□ -0.44
ATXN3-224ENST00000554040 GLI2P10070 1586 aa12.28□□□□□ -0.44
ATXN3-224ENST00000554040 SUPT5HO00267 1087 aaKnown RBP12.27□□□□□ -0.45
ATXN3-224ENST00000554040 STK24Q9Y6E0 443 aa12.27□□□□□ -0.45
ATXN3-224ENST00000554040 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
ATXN3-224ENST00000554040 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
ATXN3-224ENST00000554040 STK25O00506 426 aa12.24□□□□□ -0.45
ATXN3-224ENST00000554040 PPRC1Q5VV67 1664 aaKnown RBP12.24□□□□□ -0.45
ATXN3-224ENST00000554040 CARMIL2Q6F5E8 1435 aa12.24□□□□□ -0.45
ATXN3-224ENST00000554040 EPRSP07814 1512 aaKnown RBP12.22□□□□□ -0.45
ATXN3-224ENST00000554040 UHRF1BP1LA0JNW5 1464 aa12.22□□□□□ -0.45
ATXN3-224ENST00000554040 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
ATXN3-224ENST00000554040 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
ATXN3-224ENST00000554040 NLRP6P59044 892 aa12.22□□□□□ -0.45
ATXN3-224ENST00000554040 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
ATXN3-224ENST00000554040 TEX14Q8IWB6 1497 aa12.21□□□□□ -0.45
ATXN3-224ENST00000554040 KIF27Q86VH2 1401 aa12.19□□□□□ -0.46
ATXN3-224ENST00000554040 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
ATXN3-224ENST00000554040 EMP3P54852 163 aa12.18□□□□□ -0.46
ATXN3-224ENST00000554040 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
ATXN3-224ENST00000554040 MAP3K4Q9Y6R4 1608 aa12.14□□□□□ -0.47
ATXN3-224ENST00000554040 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
ATXN3-224ENST00000554040 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
ATXN3-224ENST00000554040 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
ATXN3-224ENST00000554040 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
ATXN3-224ENST00000554040 DISP1Q96F81 1524 aa12.11□□□□□ -0.47
ATXN3-224ENST00000554040 CUL7Q14999 1698 aa12.11□□□□□ -0.47
ATXN3-224ENST00000554040 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
ATXN3-224ENST00000554040 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
ATXN3-224ENST00000554040 MAGI3Q5TCQ9 1506 aa12.1□□□□□ -0.47
ATXN3-224ENST00000554040 WDR7Q9Y4E6 1490 aa12.09□□□□□ -0.47
ATXN3-224ENST00000554040 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
ATXN3-224ENST00000554040 KRTAP3-2Q9BYR7 98 aa12.09□□□□□ -0.47
ATXN3-224ENST00000554040 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.47
ATXN3-224ENST00000554040 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
ATXN3-224ENST00000554040 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
ATXN3-224ENST00000554040 KIF3CO14782 793 aa12.07□□□□□ -0.48
ATXN3-224ENST00000554040 PPP1R37O75864 691 aa12.06□□□□□ -0.48
ATXN3-224ENST00000554040 PTPRMP28827 1452 aa12.06□□□□□ -0.48
ATXN3-224ENST00000554040 ZCCHC11Q5TAX3 1644 aaKnown RBP12.05□□□□□ -0.48
ATXN3-224ENST00000554040 GPR153Q6NV75 609 aa12.05□□□□□ -0.48
ATXN3-224ENST00000554040 SPNS2Q8IVW8 549 aa12.05□□□□□ -0.48
ATXN3-224ENST00000554040 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
ATXN3-224ENST00000554040 UGGT2Q9NYU1 1516 aa12.03□□□□□ -0.48
ATXN3-224ENST00000554040 SOCS7O14512 581 aa12.03□□□□□ -0.48
ATXN3-224ENST00000554040 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
ATXN3-224ENST00000554040 C2orf72A6NCS6 295 aa12.01□□□□□ -0.49
ATXN3-224ENST00000554040 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
ATXN3-224ENST00000554040 ILDR2Q71H61 639 aa12.01□□□□□ -0.49
ATXN3-224ENST00000554040 CERKQ8TCT0 537 aa12.01□□□□□ -0.49
ATXN3-224ENST00000554040 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
ATXN3-224ENST00000554040 RAPGEF3O95398 923 aa12□□□□□ -0.49
ATXN3-224ENST00000554040 PHLDB1Q86UU1 1377 aa12□□□□□ -0.49
ATXN3-224ENST00000554040 ARID4BQ4LE39 1312 aaPredicted RBP11.99□□□□□ -0.49
ATXN3-224ENST00000554040 KIF21BO75037 1637 aa11.99□□□□□ -0.49
ATXN3-224ENST00000554040 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
ATXN3-224ENST00000554040 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
ATXN3-224ENST00000554040 KIAA0556O60303 1618 aa11.97□□□□□ -0.49
ATXN3-224ENST00000554040 PCF11O94913 1555 aaKnown RBP11.97□□□□□ -0.49
ATXN3-224ENST00000554040 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
ATXN3-224ENST00000554040 ERBB3P21860 1342 aa11.97□□□□□ -0.49
ATXN3-224ENST00000554040 HSPA2P54652 639 aa11.97□□□□□ -0.49
ATXN3-224ENST00000554040 ADAMTSL3P82987 1691 aa11.97□□□□□ -0.49
ATXN3-224ENST00000554040 DISP3Q9P2K9 1392 aa11.96□□□□□ -0.49
ATXN3-224ENST00000554040 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
ATXN3-224ENST00000554040 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
ATXN3-224ENST00000554040 VARS2Q5ST30 1063 aaKnown RBP11.95□□□□□ -0.5
ATXN3-224ENST00000554040 KHSRPQ92945 711 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATXN3-224ENST00000554040 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
ATXN3-224ENST00000554040 ABCA8O94911 1581 aa11.92□□□□□ -0.5
ATXN3-224ENST00000554040 ARID3CA6NKF2 412 aa11.92□□□□□ -0.5
ATXN3-224ENST00000554040 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
ATXN3-224ENST00000554040 FAM9AQ8IZU1 332 aaPredicted RBP11.91□□□□□ -0.5
ATXN3-224ENST00000554040 ATP10BO94823 1461 aa11.89□□□□□ -0.51
ATXN3-224ENST00000554040 NEO1Q92859 1461 aa11.89□□□□□ -0.51
ATXN3-224ENST00000554040 SLC34A2O95436 690 aa11.88□□□□□ -0.51
ATXN3-224ENST00000554040 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
ATXN3-224ENST00000554040 BCORL1Q5H9F3 1711 aa11.88□□□□□ -0.51
ATXN3-224ENST00000554040 MADDQ8WXG6 1647 aa11.87□□□□□ -0.51
ATXN3-224ENST00000554040 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
ATXN3-224ENST00000554040 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
ATXN3-224ENST00000554040 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
ATXN3-224ENST00000554040 PCDHGA4Q9Y5G9 962 aa11.84□□□□□ -0.51
ATXN3-224ENST00000554040 POGZQ7Z3K3 1410 aa11.83□□□□□ -0.52
ATXN3-224ENST00000554040 NUDT7P0C024 238 aa11.82□□□□□ -0.52
ATXN3-224ENST00000554040 MLECQ14165 292 aa11.82□□□□□ -0.52
ATXN3-224ENST00000554040 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
ATXN3-224ENST00000554040 ABCA9Q8IUA7 1624 aa11.82□□□□□ -0.52
ATXN3-224ENST00000554040 FRMPD1Q5SYB0 1578 aa11.8□□□□□ -0.52
ATXN3-224ENST00000554040 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
ATXN3-224ENST00000554040 AKNAQ7Z591 1439 aa11.8□□□□□ -0.52
ATXN3-224ENST00000554040 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
ATXN3-224ENST00000554040 FOXK1P85037 733 aa11.8□□□□□ -0.52
ATXN3-224ENST00000554040 GPHNQ9NQX3 736 aaPredicted RBP11.8□□□□□ -0.52
ATXN3-224ENST00000554040 RIMS1Q86UR5 1692 aaKnown RBP11.8□□□□□ -0.52
ATXN3-224ENST00000554040 FANCAO15360 1455 aa11.77□□□□□ -0.52
ATXN3-224ENST00000554040 PLEKHD1A6NEE1 506 aa11.77□□□□□ -0.53
ATXN3-224ENST00000554040 DSG2Q14126 1118 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms